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The map label for this gene is recO

Identifier: 115351066

GI number: 115351066

Start: 1101000

End: 1101839

Strand: Direct

Name: recO

Synonym: Bamb_1012

Alternate gene names: 115351066

Gene position: 1101000-1101839 (Clockwise)

Preceding gene: 115351065

Following gene: 115351067

Centisome position: 30.96

GC content: 67.98

Gene sequence:

>840_bases
ATGGGTACGAATGACGCGCCGACGTCGACCGAAGACGCGGTGACCGCCGGCGCGAACGACGCGCCGCTGCCGGCACCGCC
TGAACCGCCGCGTCGCAAGGCGCGGCGCGCGACGTCTCGCACGTCCGATTTCCGCGTCGCCGAGCAGCCGGCGTTCGTGC
TGCACAGCTATCCGTACCGGGAAACGAGCCTGATCATCGACGTGCTCACGCGCGATCACGGCCGCCTCGCGCTCGTCGCG
AAGGGCGCGAAGCGCCCGCACTCCGCGCTGCGCGGCGTGCTGCAGACGTTCCAGCCGCTGCTGCTGTCCTGGTCGGGCAA
ATCCGAAGTGCGCACGCTGACGGGCGCCGAGTGGGTGGGCGGGATGCTGCCGCTCGGCGGCGACGGGCTGTTGTGCGGCT
TCTACGTGAACGAGCTGCTCGTGAAATTCTGCGCGCGCGAGGATCCGCAGCCGCCGCTCTTCAATCACTATGTGCTGACG
CTCACGCGCCTCGCGCACGGCGAACCCGCGGTGCAGGTGCTGCGCTCGTTCGAACGCGTGCTGCTGCGCGAGACCGGCTA
TGCGATGGCGCTGAACCGCACGGTCGCGCGCCGCGCGGTCGAACCCGATCGCCGCTACGTGTTCGATCCCGAGCGCGGCG
TGCGCAATGCCGACGACGACGTGCCGTCGCACTGGCCGGTGATTACCGGACAGACGTTGCTCGACATGGAGCAGGACGAT
TACCATCGAGCCCAGACGGTTGCGCAAAGCAAGACGCTGATGCGCTTCCTGCTGAACACCTATCTCGGCGGTACGCCGCT
TGCCACGCGTCAGATCCTGATCGACCTGCAAAACCTATGA

Upstream 100 bases:

>100_bases
CGGATGGACATGGAGAGGCTGTTCGACGGCCCCGTGTATCTCGAGACCTTCGTGAAGGTGAAGAGCGGCTGGGCCGACAA
CGAGGCGGGGCTGCGCGCCT

Downstream 100 bases:

>100_bases
GCTTCTTCCTGACAACGCCCACCGCCATCGATCTCGGCGTGAATATCGACCACGTCGCGACGCTGCGCAACGCGCGCGGC
ACGGCCTATCCCGATCCGAT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MGTNDAPTSTEDAVTAGANDAPLPAPPEPPRRKARRATSRTSDFRVAEQPAFVLHSYPYRETSLIIDVLTRDHGRLALVA
KGAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVGGMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLT
LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDD
YHRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL

Sequences:

>Translated_279_residues
MGTNDAPTSTEDAVTAGANDAPLPAPPEPPRRKARRATSRTSDFRVAEQPAFVLHSYPYRETSLIIDVLTRDHGRLALVA
KGAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVGGMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLT
LTRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDD
YHRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
>Mature_278_residues
GTNDAPTSTEDAVTAGANDAPLPAPPEPPRRKARRATSRTSDFRVAEQPAFVLHSYPYRETSLIIDVLTRDHGRLALVAK
GAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVGGMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLTL
TRLAHGEPAVQVLRSFERVLLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDDY
HRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=230, Percent_Identity=38.695652173913, Blast_Score=130, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 31064; Mature: 30933

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTNDAPTSTEDAVTAGANDAPLPAPPEPPRRKARRATSRTSDFRVAEQPAFVLHSYPYR
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEECCCCC
ETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVG
HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHC
GMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLTLTRLAHGEPAVQVLRSFERV
CCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDD
HHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCHHCCCCCHH
YHRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GTNDAPTSTEDAVTAGANDAPLPAPPEPPRRKARRATSRTSDFRVAEQPAFVLHSYPYR
CCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCEEECCCCC
ETSLIIDVLTRDHGRLALVAKGAKRPHSALRGVLQTFQPLLLSWSGKSEVRTLTGAEWVG
HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHC
GMLPLGGDGLLCGFYVNELLVKFCAREDPQPPLFNHYVLTLTRLAHGEPAVQVLRSFERV
CCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LLRETGYAMALNRTVARRAVEPDRRYVFDPERGVRNADDDVPSHWPVITGQTLLDMEQDD
HHHHCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCHHCCCCCHH
YHRAQTVAQSKTLMRFLLNTYLGGTPLATRQILIDLQNL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA