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The map label for this gene is yceD [C]

Identifier: 115351048

GI number: 115351048

Start: 1084285

End: 1084920

Strand: Direct

Name: yceD [C]

Synonym: Bamb_0994

Alternate gene names: 115351048

Gene position: 1084285-1084920 (Clockwise)

Preceding gene: 115351045

Following gene: 115351049

Centisome position: 30.49

GC content: 61.79

Gene sequence:

>636_bases
ATGAACACTTCTTCTGGCAAGCCGGCGGCATCGCTTGATCCGCACGCAGTCGACCTGTTCGAATTCGCCCGCAGCGGGCG
GCAGGCAGCGGGTGCGGTGCGTCTGTCGCAACTGCCGCGCATGTTAAACGAAGTGCCGGTGGACGCGCCAGATCGCGACA
CGGTCTTCACGTGGCAGGCCGAAGGGTTCACCCAGAAGGAGTTGCAGGACGACGGCGCCGATGGGCAGCAGCCGTATCTG
CGACTCGCGGTGCACGGCCATGCGTGGCTCACGTGCCAGCGCTGCATGACTCCGTACGACGAGACGTTCGACGTCGACAT
GACGTACCGGGTCGTTGCGACCGAAGAAGAAGCTGAAGAATTTCCGCTCGACGACGATGAAGCCGATGTGATCGTGGGCA
CACGCCAGTTCGATCTCGTCGACTTGATCGAAGAGGAATTGCTGCTTTCGTTGCCGCTCGTGCCCAAGCACGAGGTTTGC
CCGGCAGTTCACGAAAGCCTCGTGTCGGGTGTGAGCGGTCCTTCGGAAGAGGCGGACGACGAGTCCGCCGAAGACGAGGA
CGAAGGCAAACGGCCGAATCCGTTCGCAGCGCTGCAAGCGTTGAAGAAGGACGGGGACGGCAGCAAGAAACACTAA

Upstream 100 bases:

>100_bases
TCGGAAGTAAAGTTACGTAATCGTACGTGGCGTAGATCACGTCCGTGGGCGGCGCCAGCAAGCCGGATCCCGCAAGTCAG
CCTGTAGGCAGGAGCGCAAC

Downstream 100 bases:

>100_bases
GCAGTTGTGGCGCGGGAAGGCGTAAAGGCTTTGGGCCAGGGTAGTTAAGCGCCGGATCGGGCTGTGTTAGAATCCGGAAA
ATCAATTAGGAGTTAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNTSSGKPAASLDPHAVDLFEFARSGRQAAGAVRLSQLPRMLNEVPVDAPDRDTVFTWQAEGFTQKELQDDGADGQQPYL
RLAVHGHAWLTCQRCMTPYDETFDVDMTYRVVATEEEAEEFPLDDDEADVIVGTRQFDLVDLIEEELLLSLPLVPKHEVC
PAVHESLVSGVSGPSEEADDESAEDEDEGKRPNPFAALQALKKDGDGSKKH

Sequences:

>Translated_211_residues
MNTSSGKPAASLDPHAVDLFEFARSGRQAAGAVRLSQLPRMLNEVPVDAPDRDTVFTWQAEGFTQKELQDDGADGQQPYL
RLAVHGHAWLTCQRCMTPYDETFDVDMTYRVVATEEEAEEFPLDDDEADVIVGTRQFDLVDLIEEELLLSLPLVPKHEVC
PAVHESLVSGVSGPSEEADDESAEDEDEGKRPNPFAALQALKKDGDGSKKH
>Mature_211_residues
MNTSSGKPAASLDPHAVDLFEFARSGRQAAGAVRLSQLPRMLNEVPVDAPDRDTVFTWQAEGFTQKELQDDGADGQQPYL
RLAVHGHAWLTCQRCMTPYDETFDVDMTYRVVATEEEAEEFPLDDDEADVIVGTRQFDLVDLIEEELLLSLPLVPKHEVC
PAVHESLVSGVSGPSEEADDESAEDEDEGKRPNPFAALQALKKDGDGSKKH

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23238; Mature: 23238

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSSGKPAASLDPHAVDLFEFARSGRQAAGAVRLSQLPRMLNEVPVDAPDRDTVFTWQA
CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
EGFTQKELQDDGADGQQPYLRLAVHGHAWLTCQRCMTPYDETFDVDMTYRVVATEEEAEE
CCCCHHHHHCCCCCCCCCEEEEEECCCHHEEHHHHCCCCCCCCCCCEEEEEEECCHHHHH
FPLDDDEADVIVGTRQFDLVDLIEEELLLSLPLVPKHEVCPAVHESLVSGVSGPSEEADD
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
ESAEDEDEGKRPNPFAALQALKKDGDGSKKH
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNTSSGKPAASLDPHAVDLFEFARSGRQAAGAVRLSQLPRMLNEVPVDAPDRDTVFTWQA
CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
EGFTQKELQDDGADGQQPYLRLAVHGHAWLTCQRCMTPYDETFDVDMTYRVVATEEEAEE
CCCCHHHHHCCCCCCCCCEEEEEECCCHHEEHHHHCCCCCCCCCCCEEEEEEECCHHHHH
FPLDDDEADVIVGTRQFDLVDLIEEELLLSLPLVPKHEVCPAVHESLVSGVSGPSEEADD
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
ESAEDEDEGKRPNPFAALQALKKDGDGSKKH
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA