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The map label for this gene is gph [C]

Identifier: 115351043

GI number: 115351043

Start: 1080543

End: 1081211

Strand: Direct

Name: gph [C]

Synonym: Bamb_0989

Alternate gene names: 115351043

Gene position: 1080543-1081211 (Clockwise)

Preceding gene: 115351042

Following gene: 115351044

Centisome position: 30.38

GC content: 68.31

Gene sequence:

>669_bases
ATGACTCGCATGGCCCGACAGCAATTTGACCTGATCGTCTTCGACTGGGACGGCACGCTGATGGATTCGACTGCGCACAT
CGCGCACAGCATCCAGGCCGCGTGCCGCGATCTCGGCCTGCCCACGCCGTCGGACGAGGCGTCCCGCTACGTGATCGGCC
TTGGGCTGCGCGATGCGCTGCGCATTACTGCACCGACCCTCGATCCGTCCGACTATCCGCGGCTGGCCGAGCGTTACCGC
TTTCACTACCTGCTGGACGACCAGCGCATCGAGTTGTTCGCCGGCGTGCGCGAACTGCTCGCGGAATTGCGCGATACGGG
TTACCTCCTGGCGGTCGCGACCGGCAAGGGCCGGGTCGGGCTGAATCGCGTGCTGGACCAGTCGAAGCTGACGAGCCTGT
TCGATGCGACGCGCTGCGCGGACGAAACGTTCTCGAAGCCGCACCCGGCGATGCTGCACGAACTGTCCCGCGAATTGGGG
CAGGATCTGGCGCGTACCGTGATGATCGGCGACACCACGCACGACCTGCAGATGGCGGCGAGCGCGGGGGCGGCCGGCGT
CGGCGTCTCCTACGGCGCGCATACGGCCGAGGCGCTGGCCGCGCTGACGCCGCGCTTCGTCGCGCCGGACGTCGTCGCGC
TGGCGGCATGGCTGCGGGAGCACGCATGA

Upstream 100 bases:

>100_bases
TCGCGCACCCGCTGACCGGCGAGCCGCTGCAGTTCGACGCGCCGCTGCCGGACGAGTGCCGGCGCTTCCTCGATCAACTC
AGCGCTTTGCGCGATAACGC

Downstream 100 bases:

>100_bases
GCGCGGCGCCGGAAGCCGTGCGCGTGTGCGCGTCGGACGCCTTGACCGACGGCGGCGCCGGCGTGCGCGTCGAAGCGACG
CTGCGCGGCGAGCAGGCGGT

Product: HAD family hydrolase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTRMARQQFDLIVFDWDGTLMDSTAHIAHSIQAACRDLGLPTPSDEASRYVIGLGLRDALRITAPTLDPSDYPRLAERYR
FHYLLDDQRIELFAGVRELLAELRDTGYLLAVATGKGRVGLNRVLDQSKLTSLFDATRCADETFSKPHPAMLHELSRELG
QDLARTVMIGDTTHDLQMAASAGAAGVGVSYGAHTAEALAALTPRFVAPDVVALAAWLREHA

Sequences:

>Translated_222_residues
MTRMARQQFDLIVFDWDGTLMDSTAHIAHSIQAACRDLGLPTPSDEASRYVIGLGLRDALRITAPTLDPSDYPRLAERYR
FHYLLDDQRIELFAGVRELLAELRDTGYLLAVATGKGRVGLNRVLDQSKLTSLFDATRCADETFSKPHPAMLHELSRELG
QDLARTVMIGDTTHDLQMAASAGAAGVGVSYGAHTAEALAALTPRFVAPDVVALAAWLREHA
>Mature_221_residues
TRMARQQFDLIVFDWDGTLMDSTAHIAHSIQAACRDLGLPTPSDEASRYVIGLGLRDALRITAPTLDPSDYPRLAERYRF
HYLLDDQRIELFAGVRELLAELRDTGYLLAVATGKGRVGLNRVLDQSKLTSLFDATRCADETFSKPHPAMLHELSRELGQ
DLARTVMIGDTTHDLQMAASAGAAGVGVSYGAHTAEALAALTPRFVAPDVVALAAWLREHA

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR000150
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 24288; Mature: 24157

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRMARQQFDLIVFDWDGTLMDSTAHIAHSIQAACRDLGLPTPSDEASRYVIGLGLRDAL
CCCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHH
RITAPTLDPSDYPRLAERYRFHYLLDDQRIELFAGVRELLAELRDTGYLLAVATGKGRVG
EEECCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
LNRVLDQSKLTSLFDATRCADETFSKPHPAMLHELSRELGQDLARTVMIGDTTHDLQMAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SAGAAGVGVSYGAHTAEALAALTPRFVAPDVVALAAWLREHA
HCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRMARQQFDLIVFDWDGTLMDSTAHIAHSIQAACRDLGLPTPSDEASRYVIGLGLRDAL
CCCHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHH
RITAPTLDPSDYPRLAERYRFHYLLDDQRIELFAGVRELLAELRDTGYLLAVATGKGRVG
EEECCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
LNRVLDQSKLTSLFDATRCADETFSKPHPAMLHELSRELGQDLARTVMIGDTTHDLQMAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SAGAAGVGVSYGAHTAEALAALTPRFVAPDVVALAAWLREHA
HCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA