Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351018

Identifier: 115351018

GI number: 115351018

Start: 1055803

End: 1055973

Strand: Direct

Name: 115351018

Synonym: Bamb_0964

Alternate gene names: NA

Gene position: 1055803-1055973 (Clockwise)

Preceding gene: 115351015

Following gene: 115351019

Centisome position: 29.69

GC content: 70.76

Gene sequence:

>171_bases
GTGGGCCGCCGGATGCGACACGATGCAACGATGAAGACGATTTTCTGCCTGTTGGCGGCCGCGCTCCTCTGCGCGGCCTG
TGCGCAGGGCGGCGCGGGCGCCGCCGGCGAGCGGGGCGGCAGCCTCGAGATGTACGGGACGATCGATCAGGGAATCACGG
TGCGCCGCTGA

Upstream 100 bases:

>100_bases
CATTCGATGTTTCGCGTTCGGATGAAATGTCGGATGCGGCGGGGCGCGCGCAGCCGAGGTCGCCGGCCGCGCACGCGTAG
AATGGCCGGACGCGGCGGCA

Downstream 100 bases:

>100_bases
CGGGCGCCATTTTCCTGTGCCGATGCCGGGTCGACGGGCGGGTGCGCGTGCGGTCGCGACAAGGCGGCGGCCCCGGCCAC
GGGTTGCCGCGGTGCAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MGRRMRHDATMKTIFCLLAAALLCAACAQGGAGAAGERGGSLEMYGTIDQGITVRR

Sequences:

>Translated_56_residues
MGRRMRHDATMKTIFCLLAAALLCAACAQGGAGAAGERGGSLEMYGTIDQGITVRR
>Mature_55_residues
GRRMRHDATMKTIFCLLAAALLCAACAQGGAGAAGERGGSLEMYGTIDQGITVRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5830; Mature: 5699

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
12.5 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
10.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRMRHDATMKTIFCLLAAALLCAACAQGGAGAAGERGGSLEMYGTIDQGITVRR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEECC
>Mature Secondary Structure 
GRRMRHDATMKTIFCLLAAALLCAACAQGGAGAAGERGGSLEMYGTIDQGITVRR
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA