| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350954
Identifier: 115350954
GI number: 115350954
Start: 991060
End: 991413
Strand: Direct
Name: 115350954
Synonym: Bamb_0900
Alternate gene names: NA
Gene position: 991060-991413 (Clockwise)
Preceding gene: 115350953
Following gene: 115350957
Centisome position: 27.87
GC content: 67.8
Gene sequence:
>354_bases ATGAAGTCGCTCGTTCAAGCCGTTGTCGTTGCTGCCGCTCTCGTCGCCCCGGTCGTGTCGTTCGCGCAGCCCGGCTCGGC ACTCACCCGCGCACAGGTTCGCGCCGAACTCGTTCAGCTCCAGCAGGCCGGTTACAACACCGCCCGCGGCGAAGATCCGC ACTATCCGGAAGCCATCCAGGCAGCCACTGCGCGCGTCGCCGAGCAGCAACGCAGCGCGCTTGCCCAGGCGCAAGGCGCC GATGCCAGCGGCTATGGCGCACAAGCGCAAGGCGCATCGGCATCGGGCTCGCGTGCGATCGGCGTGCGCCCGGCCAGTGC CGAAGAAATGAAGTCGCTGTATCGCGGCAGCTAA
Upstream 100 bases:
>100_bases AACCTGCCTTATTCTTAAGCACGCGCCTACATAAACTTCGATCTGTCAGCGATGAACGGGTGTTCACCGCGAAATCAGAC AAATCTGGAGGTAGGTCATC
Downstream 100 bases:
>100_bases GCGGCGCATCACCGGATGACGCTGCGCGGGCGGCGCAACGACGACACGTTGCGCCCCGTCGCGATGCCCGGCGGTACCGA ACATCCGTTACCTCCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQAATARVAEQQRSALAQAQGA DASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS
Sequences:
>Translated_117_residues MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQAATARVAEQQRSALAQAQGA DASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS >Mature_117_residues MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQAATARVAEQQRSALAQAQGA DASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11924; Mature: 11924
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQ CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH AATARVAEQQRSALAQAQGADASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCC >Mature Secondary Structure MKSLVQAVVVAAALVAPVVSFAQPGSALTRAQVRAELVQLQQAGYNTARGEDPHYPEAIQ CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH AATARVAEQQRSALAQAQGADASGYGAQAQGASASGSRAIGVRPASAEEMKSLYRGS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA