The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

Click here to switch to the map view.

The map label for this gene is yeiW [H]

Identifier: 115350846

GI number: 115350846

Start: 880439

End: 880756

Strand: Direct

Name: yeiW [H]

Synonym: Bamb_0792

Alternate gene names: 115350846

Gene position: 880439-880756 (Clockwise)

Preceding gene: 115350829

Following gene: 115350847

Centisome position: 24.76

GC content: 75.79

Gene sequence:

>318_bases
ATGCCTGTCCGTCCGGCACCCGCCGATGCCCCGCCGCCGCATGCGTGCCGCGAGGGGTGCGGCGCGTGCTGCATCGCGCC
GTCGATTTCGTCCCCGATTCCGGGGATGCCCGACGGCAAGCCGGCCGGCGTGCGCTGCGTGCAGCTCGGCGACGACCTGC
GCTGCCGGATCTTCGGCCGTCCGGAGCGTCCCGCGTGCTGTTCCGGGCTGCAGCCGTCCGCCGAGATGTGCGGTGCGTCG
CGCGACGACGCGCTCGCGTGGCTGACGCGCCTCGAGGTCGCGACCCAGCCCGCGCCCGGCACCGGCGCTTCCCGTTGA

Upstream 100 bases:

>100_bases
GCAGCCGGCGATGGCACAATGCGCGGTGGACCGCCGCACGCCGCGTCCGGTTGCCGCACCGTTTTTTTGTCGTTCTTGAG
AGAGTCGAGTGTCCGTCGAA

Downstream 100 bases:

>100_bases
CGCATGGTCGTGCACCGGCTCGCGCACGGAACCGGCGGCGTGTGCGCAAGCACTAACTTCGGTCCACGGCCCCGAAGCGG
CGGCCGAGCCGATGGCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MPVRPAPADAPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCRIFGRPERPACCSGLQPSAEMCGAS
RDDALAWLTRLEVATQPAPGTGASR

Sequences:

>Translated_105_residues
MPVRPAPADAPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCRIFGRPERPACCSGLQPSAEMCGAS
RDDALAWLTRLEVATQPAPGTGASR
>Mature_104_residues
PVRPAPADAPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCRIFGRPERPACCSGLQPSAEMCGASR
DDALAWLTRLEVATQPAPGTGASR

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0153 family [H]

Homologues:

Organism=Escherichia coli, GI87082060, Length=82, Percent_Identity=65.8536585365854, Blast_Score=111, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 10780; Mature: 10649

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
11.4 %Cys+Met (Translated Protein)
8.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVRPAPADAPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCRIFGR
CCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
PERPACCSGLQPSAEMCGASRDDALAWLTRLEVATQPAPGTGASR
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PVRPAPADAPPPHACREGCGACCIAPSISSPIPGMPDGKPAGVRCVQLGDDLRCRIFGR
CCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC
PERPACCSGLQPSAEMCGASRDDALAWLTRLEVATQPAPGTGASR
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]