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The map label for this gene is waaA [H]

Identifier: 115350829

GI number: 115350829

Start: 864168

End: 865535

Strand: Direct

Name: waaA [H]

Synonym: Bamb_0775

Alternate gene names: 115350829

Gene position: 864168-865535 (Clockwise)

Preceding gene: 115350828

Following gene: 115350846

Centisome position: 24.3

GC content: 73.76

Gene sequence:

>1368_bases
ATGCTGAGGGCGATCTATCGCGCGCTGTGGTGGCTCGTCGCGCCGATCGCCGTCATCCGCCTCTTTGTGCGCTCGCGCAA
GGAGCGCGGCTACCGCGAGCACGTCGCCGAGCGCTTCGGCCAGGTCGCGGGCCGTTCGCCGGACGATCGCGCGCCGCTGA
TCTGGGTGCATGCGGTGTCGGTCGGCGAGACGCGCGCCGCGCAGCCGCTGATCGACGCGCTGATGCGTACGCGTCCCGAC
GCGCGCATCCTGCTCACGCACATGACGCCGAGCGGCCGCGCGACCGGCGAGCAGATCTTCGGCGATCGCGTGCTGCGCTG
CTACCTGCCGTACGACATGCCGGGCGCGGTGCGGCGCTTCCTGCGCGCGTGGCGGCCGACGCTCGGCCTCGTGATGGAAA
CCGAGGTGTGGCCGACGCTGATCGACGAGTGCCGCCGCGCGGACGTGCCGCTCGTGCTGACCAACGCGCGGATGTCCGCG
CGCTCGCATCGGCGCGCGGCGAAGTTCGGCGCGGCCACGCGCGACGTGTTCGGCGGTTTCTCGCGCGTGCTCGCGCAGAG
CCCGGCCGATGCGGAGCGGCTGACGTCGCTCGGCGCGCGCAACGTGACGGTGCTGGGCAACCTGAAATTCGACATGACCA
CGCCGCCGGAGCTGGCCGCGCGCGGTCATGCATGGCGCGACGCGATCGGCACGCGGCCCGTGTGGGTCGCCGCCAGCACG
CGCGAGAACGAGGAGGCGCTGGTGCTGCAGGCGTTCGCCGCAATGCGCACGCCGGGCGCGCTGCTGATCCTCGTGCCGCG
CCATCCGCAGCGTTTCGGCGAAGTCGAGGCGCTCGTCGAGCGCAACGGGCTCCAGTGCGTGCGGCGTTCGGTGTGGGGTG
CGGACGCGGCGGCCCTGGCGGCCGGCCGGCCCGCTGCGGCAGAACCGTTGCCGGCCGACGTGACGGTGTTGCTCGGCGAT
TCGATGGGTGAGCTCGGCGCGTACTACGCGGCCGCCGACGTCGCGTTCATCGGCGGCAGCCTGCTGCCGCTCGGCGGGCA
GAACCTGATCGAGGCATGCGCGGTGGGCGTGCCGGTGCTGATCGGCCCGCACGTGTTCAACTTCACGCAGGCGACCGCCG
ATGCGGTCGCGGCCGGCGCGGCGATGCAGGTCGCGGATCCGCTCGATCTCGCGCACGTGCTCGACGCGCTGTTCGCCGAC
AACGCGCGGCGCATCGCGATGGGCGCGGCGGGGGCCGCGTTCGCGGCGCGCCATCGCGGCGCGACCGCGCGCTCGGTCGA
CGTGCTCGCGGCGTTGCTGCCGCCGGTCGAGCGCGGCGGCGGCGCGATGCGCGGCACAACCGACGCGTCGGAACCATCCG
ACGACTGA

Upstream 100 bases:

>100_bases
GTGCGGCGCGAATGCGCGCCGCTGGGAATTCTCGAGCGCCTGACCGGCCGGGCGCTGGTTTGACCGCGCCCCGCATCCTT
CGCGGTGACGGAGCCCGTTC

Downstream 100 bases:

>100_bases
GCGGGCGGCGCGAAGCCGCCCCTGGGCAGGCGAGGCGGCAGCGGGCCGCCGCGCCGCCGCTCACACCGTCAGCAATCCTT
TCTTCTCGATGAATGCGACG

Product: 3-deoxy-D-manno-octulosonic-acid transferase

Products: KDO2-lipid IVA; CMP; KDO1-lipid IVA [C]

Alternate protein names: KDO transferase [H]

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MLRAIYRALWWLVAPIAVIRLFVRSRKERGYREHVAERFGQVAGRSPDDRAPLIWVHAVSVGETRAAQPLIDALMRTRPD
ARILLTHMTPSGRATGEQIFGDRVLRCYLPYDMPGAVRRFLRAWRPTLGLVMETEVWPTLIDECRRADVPLVLTNARMSA
RSHRRAAKFGAATRDVFGGFSRVLAQSPADAERLTSLGARNVTVLGNLKFDMTTPPELAARGHAWRDAIGTRPVWVAAST
RENEEALVLQAFAAMRTPGALLILVPRHPQRFGEVEALVERNGLQCVRRSVWGADAAALAAGRPAAAEPLPADVTVLLGD
SMGELGAYYAAADVAFIGGSLLPLGGQNLIEACAVGVPVLIGPHVFNFTQATADAVAAGAAMQVADPLDLAHVLDALFAD
NARRIAMGAAGAAFAARHRGATARSVDVLAALLPPVERGGGAMRGTTDASEPSDD

Sequences:

>Translated_455_residues
MLRAIYRALWWLVAPIAVIRLFVRSRKERGYREHVAERFGQVAGRSPDDRAPLIWVHAVSVGETRAAQPLIDALMRTRPD
ARILLTHMTPSGRATGEQIFGDRVLRCYLPYDMPGAVRRFLRAWRPTLGLVMETEVWPTLIDECRRADVPLVLTNARMSA
RSHRRAAKFGAATRDVFGGFSRVLAQSPADAERLTSLGARNVTVLGNLKFDMTTPPELAARGHAWRDAIGTRPVWVAAST
RENEEALVLQAFAAMRTPGALLILVPRHPQRFGEVEALVERNGLQCVRRSVWGADAAALAAGRPAAAEPLPADVTVLLGD
SMGELGAYYAAADVAFIGGSLLPLGGQNLIEACAVGVPVLIGPHVFNFTQATADAVAAGAAMQVADPLDLAHVLDALFAD
NARRIAMGAAGAAFAARHRGATARSVDVLAALLPPVERGGGAMRGTTDASEPSDD
>Mature_455_residues
MLRAIYRALWWLVAPIAVIRLFVRSRKERGYREHVAERFGQVAGRSPDDRAPLIWVHAVSVGETRAAQPLIDALMRTRPD
ARILLTHMTPSGRATGEQIFGDRVLRCYLPYDMPGAVRRFLRAWRPTLGLVMETEVWPTLIDECRRADVPLVLTNARMSA
RSHRRAAKFGAATRDVFGGFSRVLAQSPADAERLTSLGARNVTVLGNLKFDMTTPPELAARGHAWRDAIGTRPVWVAAST
RENEEALVLQAFAAMRTPGALLILVPRHPQRFGEVEALVERNGLQCVRRSVWGADAAALAAGRPAAAEPLPADVTVLLGD
SMGELGAYYAAADVAFIGGSLLPLGGQNLIEACAVGVPVLIGPHVFNFTQATADAVAAGAAMQVADPLDLAHVLDALFAD
NARRIAMGAAGAAFAARHRGATARSVDVLAALLPPVERGGGAMRGTTDASEPSDD

Specific function: Essential step in lipopolysaccharides biosynthesis. Acts at transfer of 3-deoxy-D-mono octulonic acid (KDO) from CMP-KDO to a tetraacyldisaccharide 1,4'-bisphosphate precursor of lipid A (lipid IVA). Transfers two molecules of KDO to lipid IVA [H]

COG id: COG1519

COG function: function code M; 3-deoxy-D-manno-octulosonic-acid transferase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1790064, Length=444, Percent_Identity=41.2162162162162, Blast_Score=300, Evalue=1e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR007507 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF04413 Glycos_transf_N [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 48798; Mature: 48798

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAIYRALWWLVAPIAVIRLFVRSRKERGYREHVAERFGQVAGRSPDDRAPLIWVHAVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
VGETRAAQPLIDALMRTRPDARILLTHMTPSGRATGEQIFGDRVLRCYLPYDMPGAVRRF
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCEEEEECCCCCCHHHHHH
LRAWRPTLGLVMETEVWPTLIDECRRADVPLVLTNARMSARSHRRAAKFGAATRDVFGGF
HHHHCCHHCEEEECHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHH
SRVLAQSPADAERLTSLGARNVTVLGNLKFDMTTPPELAARGHAWRDAIGTRPVWVAAST
HHHHHCCCCCHHHHHHCCCCCEEEEEEEEECCCCCHHHHHCCCHHHHHCCCCCEEEEECC
RENEEALVLQAFAAMRTPGALLILVPRHPQRFGEVEALVERNGLQCVRRSVWGADAAALA
CCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHH
AGRPAAAEPLPADVTVLLGDSMGELGAYYAAADVAFIGGSLLPLGGQNLIEACAVGVPVL
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEE
IGPHVFNFTQATADAVAAGAAMQVADPLDLAHVLDALFADNARRIAMGAAGAAFAARHRG
ECCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCC
ATARSVDVLAALLPPVERGGGAMRGTTDASEPSDD
CCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRAIYRALWWLVAPIAVIRLFVRSRKERGYREHVAERFGQVAGRSPDDRAPLIWVHAVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEE
VGETRAAQPLIDALMRTRPDARILLTHMTPSGRATGEQIFGDRVLRCYLPYDMPGAVRRF
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCEEEEECCCCCCHHHHHH
LRAWRPTLGLVMETEVWPTLIDECRRADVPLVLTNARMSARSHRRAAKFGAATRDVFGGF
HHHHCCHHCEEEECHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHH
SRVLAQSPADAERLTSLGARNVTVLGNLKFDMTTPPELAARGHAWRDAIGTRPVWVAAST
HHHHHCCCCCHHHHHHCCCCCEEEEEEEEECCCCCHHHHHCCCHHHHHCCCCCEEEEECC
RENEEALVLQAFAAMRTPGALLILVPRHPQRFGEVEALVERNGLQCVRRSVWGADAAALA
CCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHH
AGRPAAAEPLPADVTVLLGDSMGELGAYYAAADVAFIGGSLLPLGGQNLIEACAVGVPVL
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEE
IGPHVFNFTQATADAVAAGAAMQVADPLDLAHVLDALFADNARRIAMGAAGAAFAARHRG
ECCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCC
ATARSVDVLAALLPPVERGGGAMRGTTDASEPSDD
CCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: KDO1-lipid IVA; CMP-3-deoxy-D-manno-octulosonate; lipid IVA [C]

Specific reaction: KDO1-lipid IVA + CMP-3-deoxy-D-manno-octulosonate = KDO2-lipid IVA + CMP CMP-3-deoxy-D-manno-octulosonate + lipid IVA = KDO1-lipid IVA + CMP [C]

General reaction: Transferring phosphorus-containing groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]