Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350803

Identifier: 115350803

GI number: 115350803

Start: 829174

End: 831021

Strand: Direct

Name: 115350803

Synonym: Bamb_0749

Alternate gene names: NA

Gene position: 829174-831021 (Clockwise)

Preceding gene: 115350802

Following gene: 115350804

Centisome position: 23.31

GC content: 53.35

Gene sequence:

>1848_bases
GTGCTTAACGAGAACTTCGATTTTGCGCTCTTCATGAGCCGGCACTTGGAAGACGTGGCTCGGAAATCGGGCGTCGAGAT
AGGCGTGGGTACACTGCCACTCGCCTTGGATATTGAAGGACTGTTGAGCCGCCCCTATAGGGCTTCGTCGGATGGTAAGG
TTAGATTCTGTTCGATTGCAGCATTTCATGCACGTAAAGGTGTTGAGGCGCTTGTCGAGGGGTTCATTCGTGCTTTCGGT
GATCGACAGGACGTGGAGCTCACGATACATTCAAATCTGGCGATCGGCTCAAGTTTTGAGCGCGTCAAGAAACTGGTCGA
CTCTAGAAAGGCAACGAATATTGTCATCAGTTGTGCCGCCCTGACTGATCAAGAGAAAAATTCGCTGATCGAGGAATGTG
ATGTTTTCGTGAATTGCTCCCGCGGTGAAGGATATTCTATCGGGCCGCGAGAAGCCCTGGCATTGGGGAAAGTACTTGCA
ATAACAGCTGTTGGTGGTCATAACGATCTGATTTCGACGCCCGGCGTTTTTGCTATACCGGCTACTATTGCGATGCCGGC
ACGCTACCCCGAAATCGATAATCTCGTCGTCGGCCGGCAATTTGCCGCGGACATCGACGACGTCAGCAAGGCACTCACGG
ACGCGTTTGAATACATTTCGTCCGGCATAAGCGCGACGACGGTACGTGCGCGGCGCCAACTCGCCGCCGAGTTCAGTTTT
ACTGGACTCGAGCTGAATTACGGTGAGTTGATCGATACCAAGCTTCGGTCATTTCGGCCCCGGCAATGCGGTTCACGCTT
TACCAGATTGCCGGCCGAGTTGCCAGCGACCGTAGAGCGGCTTCTGGGACATCGTTCTGCATCACTGCCTGGTGTTGATC
GTACCGTTGTGCAGTCTCATGACGGGGGCTTCTTCTCGGTATTCAACTCATTCATGAGTCATTTGGTGTGGGACCAGCGT
GACAAGCGGTGTCACATGGTCTTGCCAGACTGGAACGTGGATCGCATGATCAAGCGCCTAGGTACGGCTCAATTCATGAG
CTTTTGCTATGGGCGCCCGAACGAGGGAAATGTCTGGTCCAAGCTGTTCGAGCCGCTCTACGGCCTCAGCGACGCAGATA
TGGACGACGAGGGCTTCCTGTACGCAAAGGGGCGTCCTCCTGTCGCGGTGTTCAATCATGAACGTGAGCCGCAACTTACT
TATGTCCACGCGTATAAATTGTATAAGAGCGGTCAATTTTCTCGCATTCGCTCGCAATACAACAAGGTGTTCAGGGATCA
TGTGCGCTTGCGCCCTCGATACCAGCGCGAATTGGATGAATTCCGGGCGAACTTCGCCGGGAAGTTTATGATTGCGGCGC
ACGTCAAGCATCCGAGTCACGTGATCGAGCAGCCGAACGGAAAAATCGCACACATCCAATCGTATATAGACGGGATTAAG
CGCCAGCTCGAGGTTCGCGGATTAAAAAGGGATTCGCCGGACTGGGCGGTATTTCTTGCGACGGATCAGGATCGAGTAAT
CAATGTCTTCAGGGAAGAATTTGGCGACAAGATCTTTTGCTACGAGGATGTCCGCCGAACGACCGAGGCTGAAGATGCGC
GCTACGACCAGTTGGGGCCAGAGGAGCGCCGTGCAGAAGGTTTTCAGGTGCAACACTTGGTCGCTGCAAATCCGGATAAC
TGGAACATTAGGATGGCTTGGGAAGTGATTCGCGATGCGATGACTATGGCGCATTGCAATGTGCTTCTCCACATTGTCAG
CAACGTTTCGACAGCAGTGTCGTACATGAATCCGGACATCGAACTGGTTTTTTGTTCCGCCGAAGAGGGTGAGTCCGCAC
GTCACTGA

Upstream 100 bases:

>100_bases
CGGTGCATATGACTTGAATTACACCCTGGTTCCGCCTGGTGCATTGCGATTTGCTCATATCGCTTACGACTCCGATGAGC
TACCGTCTCAATGGGTCAAA

Downstream 100 bases:

>100_bases
ATGCTAGCTTTGCGTTTGGCGCCGAGCGGCATGCGGAGCGTGGAGCGCTCGCCGGGCTTAGTCGCTGCGCCTGATGGAAA
ACAAGTGGAGTCGACAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MLNENFDFALFMSRHLEDVARKSGVEIGVGTLPLALDIEGLLSRPYRASSDGKVRFCSIAAFHARKGVEALVEGFIRAFG
DRQDVELTIHSNLAIGSSFERVKKLVDSRKATNIVISCAALTDQEKNSLIEECDVFVNCSRGEGYSIGPREALALGKVLA
ITAVGGHNDLISTPGVFAIPATIAMPARYPEIDNLVVGRQFAADIDDVSKALTDAFEYISSGISATTVRARRQLAAEFSF
TGLELNYGELIDTKLRSFRPRQCGSRFTRLPAELPATVERLLGHRSASLPGVDRTVVQSHDGGFFSVFNSFMSHLVWDQR
DKRCHMVLPDWNVDRMIKRLGTAQFMSFCYGRPNEGNVWSKLFEPLYGLSDADMDDEGFLYAKGRPPVAVFNHEREPQLT
YVHAYKLYKSGQFSRIRSQYNKVFRDHVRLRPRYQRELDEFRANFAGKFMIAAHVKHPSHVIEQPNGKIAHIQSYIDGIK
RQLEVRGLKRDSPDWAVFLATDQDRVINVFREEFGDKIFCYEDVRRTTEAEDARYDQLGPEERRAEGFQVQHLVAANPDN
WNIRMAWEVIRDAMTMAHCNVLLHIVSNVSTAVSYMNPDIELVFCSAEEGESARH

Sequences:

>Translated_615_residues
MLNENFDFALFMSRHLEDVARKSGVEIGVGTLPLALDIEGLLSRPYRASSDGKVRFCSIAAFHARKGVEALVEGFIRAFG
DRQDVELTIHSNLAIGSSFERVKKLVDSRKATNIVISCAALTDQEKNSLIEECDVFVNCSRGEGYSIGPREALALGKVLA
ITAVGGHNDLISTPGVFAIPATIAMPARYPEIDNLVVGRQFAADIDDVSKALTDAFEYISSGISATTVRARRQLAAEFSF
TGLELNYGELIDTKLRSFRPRQCGSRFTRLPAELPATVERLLGHRSASLPGVDRTVVQSHDGGFFSVFNSFMSHLVWDQR
DKRCHMVLPDWNVDRMIKRLGTAQFMSFCYGRPNEGNVWSKLFEPLYGLSDADMDDEGFLYAKGRPPVAVFNHEREPQLT
YVHAYKLYKSGQFSRIRSQYNKVFRDHVRLRPRYQRELDEFRANFAGKFMIAAHVKHPSHVIEQPNGKIAHIQSYIDGIK
RQLEVRGLKRDSPDWAVFLATDQDRVINVFREEFGDKIFCYEDVRRTTEAEDARYDQLGPEERRAEGFQVQHLVAANPDN
WNIRMAWEVIRDAMTMAHCNVLLHIVSNVSTAVSYMNPDIELVFCSAEEGESARH
>Mature_615_residues
MLNENFDFALFMSRHLEDVARKSGVEIGVGTLPLALDIEGLLSRPYRASSDGKVRFCSIAAFHARKGVEALVEGFIRAFG
DRQDVELTIHSNLAIGSSFERVKKLVDSRKATNIVISCAALTDQEKNSLIEECDVFVNCSRGEGYSIGPREALALGKVLA
ITAVGGHNDLISTPGVFAIPATIAMPARYPEIDNLVVGRQFAADIDDVSKALTDAFEYISSGISATTVRARRQLAAEFSF
TGLELNYGELIDTKLRSFRPRQCGSRFTRLPAELPATVERLLGHRSASLPGVDRTVVQSHDGGFFSVFNSFMSHLVWDQR
DKRCHMVLPDWNVDRMIKRLGTAQFMSFCYGRPNEGNVWSKLFEPLYGLSDADMDDEGFLYAKGRPPVAVFNHEREPQLT
YVHAYKLYKSGQFSRIRSQYNKVFRDHVRLRPRYQRELDEFRANFAGKFMIAAHVKHPSHVIEQPNGKIAHIQSYIDGIK
RQLEVRGLKRDSPDWAVFLATDQDRVINVFREEFGDKIFCYEDVRRTTEAEDARYDQLGPEERRAEGFQVQHLVAANPDN
WNIRMAWEVIRDAMTMAHCNVLLHIVSNVSTAVSYMNPDIELVFCSAEEGESARH

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69418; Mature: 69418

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNENFDFALFMSRHLEDVARKSGVEIGVGTLPLALDIEGLLSRPYRASSDGKVRFCSIA
CCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEEHHHHHCCCCCCCCCCCEEEEEEE
AFHARKGVEALVEGFIRAFGDRQDVELTIHSNLAIGSSFERVKKLVDSRKATNIVISCAA
HHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEH
LTDQEKNSLIEECDVFVNCSRGEGYSIGPREALALGKVLAITAVGGHNDLISTPGVFAIP
HCCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEC
ATIAMPARYPEIDNLVVGRQFAADIDDVSKALTDAFEYISSGISATTVRARRQLAAEFSF
HHHCCCCCCCCCCCEEECHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
TGLELNYGELIDTKLRSFRPRQCGSRFTRLPAELPATVERLLGHRSASLPGVDRTVVQSH
CCEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCC
DGGFFSVFNSFMSHLVWDQRDKRCHMVLPDWNVDRMIKRLGTAQFMSFCYGRPNEGNVWS
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KLFEPLYGLSDADMDDEGFLYAKGRPPVAVFNHEREPQLTYVHAYKLYKSGQFSRIRSQY
HHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEEEEHHHCCCCHHHHHHHH
NKVFRDHVRLRPRYQRELDEFRANFAGKFMIAAHVKHPSHVIEQPNGKIAHIQSYIDGIK
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHH
RQLEVRGLKRDSPDWAVFLATDQDRVINVFREEFGDKIFCYEDVRRTTEAEDARYDQLGP
HHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCEEEEHHHHHHCCCHHCCCHHCCCC
EERRAEGFQVQHLVAANPDNWNIRMAWEVIRDAMTMAHCNVLLHIVSNVSTAVSYMNPDI
HHHHCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ELVFCSAEEGESARH
EEEEEECCCCCCCCC
>Mature Secondary Structure
MLNENFDFALFMSRHLEDVARKSGVEIGVGTLPLALDIEGLLSRPYRASSDGKVRFCSIA
CCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEEHHHHHCCCCCCCCCCCEEEEEEE
AFHARKGVEALVEGFIRAFGDRQDVELTIHSNLAIGSSFERVKKLVDSRKATNIVISCAA
HHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEH
LTDQEKNSLIEECDVFVNCSRGEGYSIGPREALALGKVLAITAVGGHNDLISTPGVFAIP
HCCHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEC
ATIAMPARYPEIDNLVVGRQFAADIDDVSKALTDAFEYISSGISATTVRARRQLAAEFSF
HHHCCCCCCCCCCCEEECHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
TGLELNYGELIDTKLRSFRPRQCGSRFTRLPAELPATVERLLGHRSASLPGVDRTVVQSH
CCEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCC
DGGFFSVFNSFMSHLVWDQRDKRCHMVLPDWNVDRMIKRLGTAQFMSFCYGRPNEGNVWS
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KLFEPLYGLSDADMDDEGFLYAKGRPPVAVFNHEREPQLTYVHAYKLYKSGQFSRIRSQY
HHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEEEEEHHHCCCCHHHHHHHH
NKVFRDHVRLRPRYQRELDEFRANFAGKFMIAAHVKHPSHVIEQPNGKIAHIQSYIDGIK
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHH
RQLEVRGLKRDSPDWAVFLATDQDRVINVFREEFGDKIFCYEDVRRTTEAEDARYDQLGP
HHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCEEEEHHHHHHCCCHHCCCHHCCCC
EERRAEGFQVQHLVAANPDNWNIRMAWEVIRDAMTMAHCNVLLHIVSNVSTAVSYMNPDI
HHHHCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ELVFCSAEEGESARH
EEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA