| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350802
Identifier: 115350802
GI number: 115350802
Start: 827480
End: 828823
Strand: Direct
Name: 115350802
Synonym: Bamb_0748
Alternate gene names: NA
Gene position: 827480-828823 (Clockwise)
Preceding gene: 115350801
Following gene: 115350803
Centisome position: 23.27
GC content: 54.76
Gene sequence:
>1344_bases ATGAAATTTGTATCGTACGCGCAGAACTATGAAGATGTGATGCTCCGGCGCGCGCTCGCTAAAGTCGATCGCGGATTCTA CATAGATGTCGGCGCTGCCGAGCCATATGCAGATTCGGTAACCGCGGCATTCTACGAGCGTGGCTGGCGTGGCATAAACA TCGAGCCGATGCCCGGGCCGTTCGATCGACTGGCTCAGGCGAGACCGGAAGACGTCAATCTGCAAGTTGCCGTGGAGAAC AAGCAGACGGTCGCCCAGTATTTCGCAGTGGATGGCGGTAACGGCATTTCGACGGGCATTCAAAGGCTCGCCGAAGGGTA TAGGAGCGCGAACTGGGACATCAGTCAGGTAACCGTTGCGGTCACGACATTGCGCGATATATGCGCGACGTATGTCGGCG AGAGGCCGGTCCATTTCCTCAAGATTGATGTTGAAGGTAACGAAAGAGAGGTGCTGGCGAGTGCTGATTTCAATACCTTT CGCCCTTGGATCATCCTGGTCGAGGCCACGGAGCCGAATTCCCAGATACCGTCGCATGATGACTGGGAAGCCCTTTTGCT GGAAGCGAAATATCATTTCGTCTATTTCGATGGTCTGAATCGCTTCTACGTGTCGGCAGAAAAGATGGATGAATTGAAAC ACGCCTTTATGGTTCCGCCAAACTGGTTTGACGGATTTATTCGGGCATCGGAGTCCGACATGATTCGGCGTGCGATGGAT TTGGAGCAGCAGCTCATTGAATCGCGGAAACAGCTGCAAGAGGCTCATGAGGGATGGTCTTTGGAAAAGGGCGCACGAGA AGAATTAGAGGTGCGATTGAACAGCATGACCGATCGTGCGCATGACGAGCAGGCGTCGCAAGTTGTTTTGAAAGACTCAA GCCAAGATTGTGTCGTGCAGAATTCAAAGATATCGCAAAACGAGATCGAGCAACTCAAGGCGCGGGTTGCGGCAAGCGAG GGAGATCTCGAGAGTCATCGCGCCCAATTGGCCGAATTGCGCACGCGATTGACCGAGAGTGAAAAGTCCGCACAAGTGCT GAGCACCGAGCGCGACACGGCCTACCAGGAGCTGTTCGAGTCATCCAGACATGCTGCTTGGCTGAGCCAGGAAAGGGTGC GCTTGCAGGAAAGGATCGACGAGTCATCCAGACATGTTGCGTGGTCGAACCAGGAAAGGGGACGCTTGCAGGGGAAGATC GACGAACTTGAGCACATGATCGGTCCGCTCCGCTTACAAGAGGAGCGTGTGTCGGCCGCGCTGCATGCGGTGCTTCGGAG TACATCGTGGAAATTGACCGGCCCGCTGCGATGCATAAAGCGCATGATGCAACGCCGATCCTAG
Upstream 100 bases:
>100_bases CTGCCAGAAAGTGATTGCATGGCATTGCTCCCGGTGTGCTTGCGCGTAAATGGGCCGCACACCATCTCTCTAACGTGTGG TCATTCGAGTTGTTTGATCG
Downstream 100 bases:
>100_bases TATTAATGGAGCAAATTTTGGTATCGAATTCGATTTGCGTCATTGGTCGCTGTACTTTCGGGACTGGAATCGGCGCTGTG ACGTATGCGGCGTGTGAGAT
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: FkbM Family Methyltransferase; Methyltransferase FkbM; SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase FkbM Family Protein; Methyltransferase FkbM Family Domain Protein; Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKFVSYAQNYEDVMLRRALAKVDRGFYIDVGAAEPYADSVTAAFYERGWRGINIEPMPGPFDRLAQARPEDVNLQVAVEN KQTVAQYFAVDGGNGISTGIQRLAEGYRSANWDISQVTVAVTTLRDICATYVGERPVHFLKIDVEGNEREVLASADFNTF RPWIILVEATEPNSQIPSHDDWEALLLEAKYHFVYFDGLNRFYVSAEKMDELKHAFMVPPNWFDGFIRASESDMIRRAMD LEQQLIESRKQLQEAHEGWSLEKGAREELEVRLNSMTDRAHDEQASQVVLKDSSQDCVVQNSKISQNEIEQLKARVAASE GDLESHRAQLAELRTRLTESEKSAQVLSTERDTAYQELFESSRHAAWLSQERVRLQERIDESSRHVAWSNQERGRLQGKI DELEHMIGPLRLQEERVSAALHAVLRSTSWKLTGPLRCIKRMMQRRS
Sequences:
>Translated_447_residues MKFVSYAQNYEDVMLRRALAKVDRGFYIDVGAAEPYADSVTAAFYERGWRGINIEPMPGPFDRLAQARPEDVNLQVAVEN KQTVAQYFAVDGGNGISTGIQRLAEGYRSANWDISQVTVAVTTLRDICATYVGERPVHFLKIDVEGNEREVLASADFNTF RPWIILVEATEPNSQIPSHDDWEALLLEAKYHFVYFDGLNRFYVSAEKMDELKHAFMVPPNWFDGFIRASESDMIRRAMD LEQQLIESRKQLQEAHEGWSLEKGAREELEVRLNSMTDRAHDEQASQVVLKDSSQDCVVQNSKISQNEIEQLKARVAASE GDLESHRAQLAELRTRLTESEKSAQVLSTERDTAYQELFESSRHAAWLSQERVRLQERIDESSRHVAWSNQERGRLQGKI DELEHMIGPLRLQEERVSAALHAVLRSTSWKLTGPLRCIKRMMQRRS >Mature_447_residues MKFVSYAQNYEDVMLRRALAKVDRGFYIDVGAAEPYADSVTAAFYERGWRGINIEPMPGPFDRLAQARPEDVNLQVAVEN KQTVAQYFAVDGGNGISTGIQRLAEGYRSANWDISQVTVAVTTLRDICATYVGERPVHFLKIDVEGNEREVLASADFNTF RPWIILVEATEPNSQIPSHDDWEALLLEAKYHFVYFDGLNRFYVSAEKMDELKHAFMVPPNWFDGFIRASESDMIRRAMD LEQQLIESRKQLQEAHEGWSLEKGAREELEVRLNSMTDRAHDEQASQVVLKDSSQDCVVQNSKISQNEIEQLKARVAASE GDLESHRAQLAELRTRLTESEKSAQVLSTERDTAYQELFESSRHAAWLSQERVRLQERIDESSRHVAWSNQERGRLQGKI DELEHMIGPLRLQEERVSAALHAVLRSTSWKLTGPLRCIKRMMQRRS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51224; Mature: 51224
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVSYAQNYEDVMLRRALAKVDRGFYIDVGAAEPYADSVTAAFYERGWRGINIEPMPGP CCCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC FDRLAQARPEDVNLQVAVENKQTVAQYFAVDGGNGISTGIQRLAEGYRSANWDISQVTVA HHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH VTTLRDICATYVGERPVHFLKIDVEGNEREVLASADFNTFRPWIILVEATEPNSQIPSHD HHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC DWEALLLEAKYHFVYFDGLNRFYVSAEKMDELKHAFMVPPNWFDGFIRASESDMIRRAMD CHHHHEEEEEEEEEEEECCCCEEEEHHHHHHHHHHEECCCCHHHHHHCCCHHHHHHHHHH LEQQLIESRKQLQEAHEGWSLEKGAREELEVRLNSMTDRAHDEQASQVVLKDSSQDCVVQ HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEE NSKISQNEIEQLKARVAASEGDLESHRAQLAELRTRLTESEKSAQVLSTERDTAYQELFE CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHH SSRHAAWLSQERVRLQERIDESSRHVAWSNQERGRLQGKIDELEHMIGPLRLQEERVSAA CCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHCCCHHHHHHHHCCHHHHHHHHHHH LHAVLRSTSWKLTGPLRCIKRMMQRRS HHHHHHCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKFVSYAQNYEDVMLRRALAKVDRGFYIDVGAAEPYADSVTAAFYERGWRGINIEPMPGP CCCHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCC FDRLAQARPEDVNLQVAVENKQTVAQYFAVDGGNGISTGIQRLAEGYRSANWDISQVTVA HHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH VTTLRDICATYVGERPVHFLKIDVEGNEREVLASADFNTFRPWIILVEATEPNSQIPSHD HHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCC DWEALLLEAKYHFVYFDGLNRFYVSAEKMDELKHAFMVPPNWFDGFIRASESDMIRRAMD CHHHHEEEEEEEEEEEECCCCEEEEHHHHHHHHHHEECCCCHHHHHHCCCHHHHHHHHHH LEQQLIESRKQLQEAHEGWSLEKGAREELEVRLNSMTDRAHDEQASQVVLKDSSQDCVVQ HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEE NSKISQNEIEQLKARVAASEGDLESHRAQLAELRTRLTESEKSAQVLSTERDTAYQELFE CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHH SSRHAAWLSQERVRLQERIDESSRHVAWSNQERGRLQGKIDELEHMIGPLRLQEERVSAA CCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHCCCHHHHHHHHCCHHHHHHHHHHH LHAVLRSTSWKLTGPLRCIKRMMQRRS HHHHHHCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA