Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350726

Identifier: 115350726

GI number: 115350726

Start: 752998

End: 754155

Strand: Direct

Name: 115350726

Synonym: Bamb_0672

Alternate gene names: NA

Gene position: 752998-754155 (Clockwise)

Preceding gene: 115350725

Following gene: 115350727

Centisome position: 21.17

GC content: 69.17

Gene sequence:

>1158_bases
ATGATGCCGCGGATCGTCTATCTCGCGACGGCCGACGCACGCGGCCACCTGATGCGCGCGCAACTGCTCGTGCATGCGCT
GCGTGCGGCCGGCGCGCAGGTCGCCGTGCTGACGACGTCCGATGCGGGGCAGGCGTTCCTGGCTGCGTTCGACATCGACG
CGGCCGTGCTGTCCCGTCACTACGCGGTGCAGTTCGATGAACGGCAGAACATGCTGCGCGACGCGACCGATCGCAATGTC
GCGCACTACGTGTTCAGGCCGACGCGCATGCCGCGTGACATCGCGCGGCTGCGTGCGCTCGTCCGCGATGCCGATCTCGT
GATCAACGACTCGTTTCATCCGGCGCTGTTGTTCATGGGCGCGATGCCGGGCTGGCGACGCCGCATCGTCCACGTATACG
GCGGCAGCCTGCGCCGCGCGTTGACCGCGAATTTCGACGCACGTCTGCCGCGCGCACTGGCGCGTGCATTTGCACGGATC
GTCGACTGGCAGATCGATTCGGCGCGATGCTGCATCGAACACGATTTTGCATACGATGCCGCCGATGACGTCCGGCGATC
GCGCACGCATTGCCGGCTGCCGACGCCGGTGCCGATCGTCGCCGAGCGGCCGGCTTCGGAGCCGGCTGCAGCCGCCATTT
ATCTGAACCCGCACTTTCGCGATATCGCGCTCGCCGATGCGTTGTCCGCCGGCATGCGCGACGCGGGGCTCGCCACCCAT
CGCGTGGGCGAAGGCTATGCCGGGCACGACGGCTGGACCGGCGTCGACGCCGACTGGGTGACGCGCGCCGCCCATGCTCC
GCTGATCGTGTCGGCACCCGGCATGGCCGCGCTGTCGATCGCACATGTGTATCGCCGCCCGATCCTACTCGTGCAGTCCG
ATCAGCCCGAGCAGGCGAGCAACGCTGCGCGCGCCGCGCAACTGCAACTCGTGCATCGCGTCGTCACGTGGCGCGGCGAC
GCGGCCGCGTTCCGGCGGGAAGTCGGGCAGGCTGCAGGCGAACTGATGCGCCATCCCGGTACGCGGGCAGGGACGATCGC
CGGCCGCGAGCATGCACGTGCGCGCGTCGACGCATGGACGTCACGCCTCCTCGCGTTGCGTCCGCATGCGAAGGTGGCCG
ATGGGGAGACGCGATGCGAGGCGCCGGCACCACGATGA

Upstream 100 bases:

>100_bases
CGTTGCTGAACGAGATCCGCGCGATCGAAGCCGGTTTCGGCGTGACGGGCGCGCTGGCGATGGTCGCGGCCGGCTGGTTC
CAGTCGCTTCGTCCGCGCGC

Downstream 100 bases:

>100_bases
ATTCGCTGTCGCTTCGTGACGATCGCCGGCCCGACATCCGGCAGATGCTGGCCGCGACGTTCGGCATGGCAGCCGGCCTC
GCGATCTTCTTTCTGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVAVLTTSDAGQAFLAAFDIDAAVLSRHYAVQFDERQNMLRDATDRNV
AHYVFRPTRMPRDIARLRALVRDADLVINDSFHPALLFMGAMPGWRRRIVHVYGGSLRRALTANFDARLPRALARAFARI
VDWQIDSARCCIEHDFAYDAADDVRRSRTHCRLPTPVPIVAERPASEPAAAAIYLNPHFRDIALADALSAGMRDAGLATH
RVGEGYAGHDGWTGVDADWVTRAAHAPLIVSAPGMAALSIAHVYRRPILLVQSDQPEQASNAARAAQLQLVHRVVTWRGD
AAAFRREVGQAAGELMRHPGTRAGTIAGREHARARVDAWTSRLLALRPHAKVADGETRCEAPAPR

Sequences:

>Translated_385_residues
MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVAVLTTSDAGQAFLAAFDIDAAVLSRHYAVQFDERQNMLRDATDRNV
AHYVFRPTRMPRDIARLRALVRDADLVINDSFHPALLFMGAMPGWRRRIVHVYGGSLRRALTANFDARLPRALARAFARI
VDWQIDSARCCIEHDFAYDAADDVRRSRTHCRLPTPVPIVAERPASEPAAAAIYLNPHFRDIALADALSAGMRDAGLATH
RVGEGYAGHDGWTGVDADWVTRAAHAPLIVSAPGMAALSIAHVYRRPILLVQSDQPEQASNAARAAQLQLVHRVVTWRGD
AAAFRREVGQAAGELMRHPGTRAGTIAGREHARARVDAWTSRLLALRPHAKVADGETRCEAPAPR
>Mature_385_residues
MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVAVLTTSDAGQAFLAAFDIDAAVLSRHYAVQFDERQNMLRDATDRNV
AHYVFRPTRMPRDIARLRALVRDADLVINDSFHPALLFMGAMPGWRRRIVHVYGGSLRRALTANFDARLPRALARAFARI
VDWQIDSARCCIEHDFAYDAADDVRRSRTHCRLPTPVPIVAERPASEPAAAAIYLNPHFRDIALADALSAGMRDAGLATH
RVGEGYAGHDGWTGVDADWVTRAAHAPLIVSAPGMAALSIAHVYRRPILLVQSDQPEQASNAARAAQLQLVHRVVTWRGD
AAAFRREVGQAAGELMRHPGTRAGTIAGREHARARVDAWTSRLLALRPHAKVADGETRCEAPAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42248; Mature: 42248

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVAVLTTSDAGQAFLAAFDIDAAVLSRH
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECHHHHHHHHH
YAVQFDERQNMLRDATDRNVAHYVFRPTRMPRDIARLRALVRDADLVINDSFHPALLFMG
HEEEEHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHH
AMPGWRRRIVHVYGGSLRRALTANFDARLPRALARAFARIVDWQIDSARCCIEHDFAYDA
CCCHHHHHEEHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
ADDVRRSRTHCRLPTPVPIVAERPASEPAAAAIYLNPHFRDIALADALSAGMRDAGLATH
HHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHH
RVGEGYAGHDGWTGVDADWVTRAAHAPLIVSAPGMAALSIAHVYRRPILLVQSDQPEQAS
HCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEEEEECCCCHHHH
NAARAAQLQLVHRVVTWRGDAAAFRREVGQAAGELMRHPGTRAGTIAGREHARARVDAWT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SRLLALRPHAKVADGETRCEAPAPR
HHHHEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMPRIVYLATADARGHLMRAQLLVHALRAAGAQVAVLTTSDAGQAFLAAFDIDAAVLSRH
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEECHHHHHHHHH
YAVQFDERQNMLRDATDRNVAHYVFRPTRMPRDIARLRALVRDADLVINDSFHPALLFMG
HEEEEHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHH
AMPGWRRRIVHVYGGSLRRALTANFDARLPRALARAFARIVDWQIDSARCCIEHDFAYDA
CCCHHHHHEEHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
ADDVRRSRTHCRLPTPVPIVAERPASEPAAAAIYLNPHFRDIALADALSAGMRDAGLATH
HHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCHHH
RVGEGYAGHDGWTGVDADWVTRAAHAPLIVSAPGMAALSIAHVYRRPILLVQSDQPEQAS
HCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCEEEEECCCCHHHH
NAARAAQLQLVHRVVTWRGDAAAFRREVGQAAGELMRHPGTRAGTIAGREHARARVDAWT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SRLLALRPHAKVADGETRCEAPAPR
HHHHEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA