| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350723
Identifier: 115350723
GI number: 115350723
Start: 750183
End: 751175
Strand: Direct
Name: 115350723
Synonym: Bamb_0669
Alternate gene names: NA
Gene position: 750183-751175 (Clockwise)
Preceding gene: 115350722
Following gene: 115350724
Centisome position: 21.09
GC content: 69.99
Gene sequence:
>993_bases GTGCTGGAGACGAACAACCTGCGCGGCGGCGCGGGGCTCGTGCAGGCCGTCGACAGCCTGAAGCGCCTCGTATCGGCGCT GTCGAAGCAGACCGTACCGCCCGCGGCACTCGCGCAATGGATCATCACGCACGACGGCCTGCCGGCCGATGCGTGCGCGG AGATCGCCGCGCTGGCCGGCCGCCCGATCGACTTCGTCGAGATCGGCGCGAGCACCGGCTACTACGATGCGAAGAACGAC GGGTTCGACCACGTCGACGCGGCCCGCTGCGACATCGTCGTGTTCGGCGATGCCGATTGCCGGCCGGCCGACGACTGGCT CGAGCACCTGCTCGCACCGTTCGCGCGCGAAGCGGGCGATGCGCCCGCCGCGGTGGCGGGGCGCACCAGCTATGCGCCGA ACGTGCTCGGCATCGCGCTGACGTCGATCGATTTCATGTATTTCCCGAGCCCGCTGCGTGACGGTGCGACACGCAATTTC TACGCGAACAACGTCGCGTTCCGGCGCGACGTATTCGCACGATTCCGCTACGAGCCGCTCGACGGCGTCTATCGCGCGCA TTGCCAGGTGATGGGGCTGCGGATGCAGGCGGCCGGCGTGGCCGTCGAGTTCGCGCCGGCCGCGCACACCGAGCATCGGC TGCCGGACACGCATCGCGAATCGCTGAAGCTGCGCTGGATGCGCGGGGAGGACAGCGTCGGGCTGACGCCGTATCTCGTG AACGCGTACCTGCCGCGCGGGTGGCAGTGGCTCGGCCGCAGCGGCCCGCTCGGCCCGTTCTGCGTGATGGCCATGCGGCT CGGCTACAGTCTGCGCGCGCTGAATCGCCAGCAGTTGCCGCGACTGGGCGCTGCCCGCTATCTCGCGGCCGTGGGCGTCA CGATCGCCGCGTCTGCCATCGATACGCTCGGCGCGCTCGCGCGCGGTTTCGGTCTCGCCGGGCGTGCATCGGCGCGGCGC GATCTCGAAGCGCTCTCCTATCACCGTCATTGA
Upstream 100 bases:
>100_bases GGTGCGCATGACGATGGAGATATTCCGGATGCCAGACTTCACAGAAGCCACGCGACACGCCCGCGCGGCGGCCCGCGCCG TGGCGGCGCAGGCCGCGCTC
Downstream 100 bases:
>100_bases GCCGGTGCCGCGCATCGCGCGGCCATGGCACGCCCACATCCTGCACCCCTCCCGACAACGACCATGTCCTCTCTCGCCAC CCGTGTTGCCTGCCTCGCCC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MLETNNLRGGAGLVQAVDSLKRLVSALSKQTVPPAALAQWIITHDGLPADACAEIAALAGRPIDFVEIGASTGYYDAKND GFDHVDAARCDIVVFGDADCRPADDWLEHLLAPFAREAGDAPAAVAGRTSYAPNVLGIALTSIDFMYFPSPLRDGATRNF YANNVAFRRDVFARFRYEPLDGVYRAHCQVMGLRMQAAGVAVEFAPAAHTEHRLPDTHRESLKLRWMRGEDSVGLTPYLV NAYLPRGWQWLGRSGPLGPFCVMAMRLGYSLRALNRQQLPRLGAARYLAAVGVTIAASAIDTLGALARGFGLAGRASARR DLEALSYHRH
Sequences:
>Translated_330_residues MLETNNLRGGAGLVQAVDSLKRLVSALSKQTVPPAALAQWIITHDGLPADACAEIAALAGRPIDFVEIGASTGYYDAKND GFDHVDAARCDIVVFGDADCRPADDWLEHLLAPFAREAGDAPAAVAGRTSYAPNVLGIALTSIDFMYFPSPLRDGATRNF YANNVAFRRDVFARFRYEPLDGVYRAHCQVMGLRMQAAGVAVEFAPAAHTEHRLPDTHRESLKLRWMRGEDSVGLTPYLV NAYLPRGWQWLGRSGPLGPFCVMAMRLGYSLRALNRQQLPRLGAARYLAAVGVTIAASAIDTLGALARGFGLAGRASARR DLEALSYHRH >Mature_330_residues MLETNNLRGGAGLVQAVDSLKRLVSALSKQTVPPAALAQWIITHDGLPADACAEIAALAGRPIDFVEIGASTGYYDAKND GFDHVDAARCDIVVFGDADCRPADDWLEHLLAPFAREAGDAPAAVAGRTSYAPNVLGIALTSIDFMYFPSPLRDGATRNF YANNVAFRRDVFARFRYEPLDGVYRAHCQVMGLRMQAAGVAVEFAPAAHTEHRLPDTHRESLKLRWMRGEDSVGLTPYLV NAYLPRGWQWLGRSGPLGPFCVMAMRLGYSLRALNRQQLPRLGAARYLAAVGVTIAASAIDTLGALARGFGLAGRASARR DLEALSYHRH
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35808; Mature: 35808
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETNNLRGGAGLVQAVDSLKRLVSALSKQTVPPAALAQWIITHDGLPADACAEIAALAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC RPIDFVEIGASTGYYDAKNDGFDHVDAARCDIVVFGDADCRPADDWLEHLLAPFAREAGD CCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC APAAVAGRTSYAPNVLGIALTSIDFMYFPSPLRDGATRNFYANNVAFRRDVFARFRYEPL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCEECCCHHHHHHHHHHHCCCCC DGVYRAHCQVMGLRMQAAGVAVEFAPAAHTEHRLPDTHRESLKLRWMRGEDSVGLTPYLV HHHHHHHHHHHHEEEHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH NAYLPRGWQWLGRSGPLGPFCVMAMRLGYSLRALNRQQLPRLGAARYLAAVGVTIAASAI HHHCCCCHHHCCCCCCCHHHHHHHHHHCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHH DTLGALARGFGLAGRASARRDLEALSYHRH HHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLETNNLRGGAGLVQAVDSLKRLVSALSKQTVPPAALAQWIITHDGLPADACAEIAALAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC RPIDFVEIGASTGYYDAKNDGFDHVDAARCDIVVFGDADCRPADDWLEHLLAPFAREAGD CCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC APAAVAGRTSYAPNVLGIALTSIDFMYFPSPLRDGATRNFYANNVAFRRDVFARFRYEPL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCEECCCHHHHHHHHHHHCCCCC DGVYRAHCQVMGLRMQAAGVAVEFAPAAHTEHRLPDTHRESLKLRWMRGEDSVGLTPYLV HHHHHHHHHHHHEEEHHCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH NAYLPRGWQWLGRSGPLGPFCVMAMRLGYSLRALNRQQLPRLGAARYLAAVGVTIAASAI HHHCCCCHHHCCCCCCCHHHHHHHHHHCHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHH DTLGALARGFGLAGRASARRDLEALSYHRH HHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA