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The map label for this gene is 115350604

Identifier: 115350604

GI number: 115350604

Start: 616888

End: 617439

Strand: Direct

Name: 115350604

Synonym: Bamb_0550

Alternate gene names: NA

Gene position: 616888-617439 (Clockwise)

Preceding gene: 115350603

Following gene: 115350605

Centisome position: 17.35

GC content: 67.75

Gene sequence:

>552_bases
GTGATCCGCAGATCGTTTTTGGGGCTCGTCGGCAGCGCGGTCGCGCTGTCGGCATGCGGTTTCCAGTTGCGCGGCAGGCA
GGACTACGCGTTCAAGCGCCTGCTGGTGGCCGGCGCGCCGGCGCCCGTCGAGGCGCGGCTCGTGCGCCTCGTCGAGGCTG
GCAGCGACACGAAGATCGTCAAGTCGATGGACGAAGCCGATGCCGTGCTGCGCATGTCGGAGTCGCGCGGGCAGAACACG
CTGACGCTCAACAAGTACGGCTCCGCGCAGGAATATGCGCTCTACTACACGTTGAATTTCACGCTGACGAGCCAGGACGG
CACGCTGCTGATCCCGCCGAGCGCGATCGCGCTGAACCGCGCGATGACGTACAGCGATCAGTACACCAACGCGAAGGCGC
AGGAAGCCGAGATTCTGTACGCCGACATGCAGAACGACGCGGTCGACCAGCTGATGCGGCGTCTCGCGATCGTCCACTCG
CTGACGCCGGCGCCGGAGGACGTGGTGCCGGGCGTCGCGCCGCGCGCGCCGCTGCCGCCGCCGCCGCTGTAA

Upstream 100 bases:

>100_bases
ACGGCAAGCCGGCGAAGAAGATCGTCGTCGTGCCCGGCCGCCTCGTGAACATCGTCGTCTGACGGCCATTGGCCGTCGGG
CGCACACAGAAGGAGCGAAG

Downstream 100 bases:

>100_bases
TCGCCGGCGCACGCACCGATGCAATTGCGACTTGATGCGCTGGAGCCGCACCTCGCGAAGGGGATGGCCGGGCTCTACAC
CGTCTACGGCGACGAGCCGC

Product: rare lipoprotein B

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MIRRSFLGLVGSAVALSACGFQLRGRQDYAFKRLLVAGAPAPVEARLVRLVEAGSDTKIVKSMDEADAVLRMSESRGQNT
LTLNKYGSAQEYALYYTLNFTLTSQDGTLLIPPSAIALNRAMTYSDQYTNAKAQEAEILYADMQNDAVDQLMRRLAIVHS
LTPAPEDVVPGVAPRAPLPPPPL

Sequences:

>Translated_183_residues
MIRRSFLGLVGSAVALSACGFQLRGRQDYAFKRLLVAGAPAPVEARLVRLVEAGSDTKIVKSMDEADAVLRMSESRGQNT
LTLNKYGSAQEYALYYTLNFTLTSQDGTLLIPPSAIALNRAMTYSDQYTNAKAQEAEILYADMQNDAVDQLMRRLAIVHS
LTPAPEDVVPGVAPRAPLPPPPL
>Mature_183_residues
MIRRSFLGLVGSAVALSACGFQLRGRQDYAFKRLLVAGAPAPVEARLVRLVEAGSDTKIVKSMDEADAVLRMSESRGQNT
LTLNKYGSAQEYALYYTLNFTLTSQDGTLLIPPSAIALNRAMTYSDQYTNAKAQEAEILYADMQNDAVDQLMRRLAIVHS
LTPAPEDVVPGVAPRAPLPPPPL

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19869; Mature: 19869

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRSFLGLVGSAVALSACGFQLRGRQDYAFKRLLVAGAPAPVEARLVRLVEAGSDTKIV
CCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
KSMDEADAVLRMSESRGQNTLTLNKYGSAQEYALYYTLNFTLTSQDGTLLIPPSAIALNR
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCEEEECCCHHHHHH
AMTYSDQYTNAKAQEAEILYADMQNDAVDQLMRRLAIVHSLTPAPEDVVPGVAPRAPLPP
HHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
PPL
CCC
>Mature Secondary Structure
MIRRSFLGLVGSAVALSACGFQLRGRQDYAFKRLLVAGAPAPVEARLVRLVEAGSDTKIV
CCCHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
KSMDEADAVLRMSESRGQNTLTLNKYGSAQEYALYYTLNFTLTSQDGTLLIPPSAIALNR
HHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCEEEECCCHHHHHH
AMTYSDQYTNAKAQEAEILYADMQNDAVDQLMRRLAIVHSLTPAPEDVVPGVAPRAPLPP
HHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCC
PPL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA