| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is ftsW [H]
Identifier: 115350516
GI number: 115350516
Start: 524032
End: 525315
Strand: Direct
Name: ftsW [H]
Synonym: Bamb_0462
Alternate gene names: 115350516
Gene position: 524032-525315 (Clockwise)
Preceding gene: 115350515
Following gene: 115350517
Centisome position: 14.73
GC content: 66.51
Gene sequence:
>1284_bases ATGAGCTGGTCCGATCGCCTCGTCTCCCGTTTCAACGACCGGCGCGGCACCGGCGGCAATGCCGCGGGCGGCCGCGTCGC GTCGGCCACGCGCGCCGCGACGGGCGGCCTCGCCAGCGTCGTCAACGGCGTGCGGCCGAGCCGCTCGCGGATGCTCGATT TCGACTACTCGCTGCTGTGGGTCGCGATCGCGTTGCTCGGGCTCGGCGTCGTGATGGTCTATTCGGCGTCGATCGCGATG CCCGATTCGCCGAAATACGCGGCGTATCACGATTACGCGTTCCTGATGCGTCACTGCGTGTCGCTTGGTGTCGCGTTCAT CGCGGCGGTGATCGCGTTCCGCGTCCCGGTGTCGACGTGGGACAAGTACGCGCCGCATCTCTTCCTGATCGCGCTCGTCG GGCTCGTGATCGTGCTGATTCCGCACGTCGGCAAGGGCGTGAACGGCGCGCGCCGCTGGATTCCGCTCGGCATCACGAAC ATGCAGCCGTCGGAAATCATGAAGCTCGCGGTGACGATCTACGCGGCGAACTACACGGTGCGCAAGCAGGAATACATGCA GAGCTTCGCGAAGGGCTTCCTGCCGATGGCGTTCGCGGTCGGTCTCGTCGGCGCGCTGCTGCTGCTCGAGCCGGACATGG GCGCGTTCATGGTGGTCGCCGCGATCGCGATGGGCGTGCTGTTCCTCGGCGGCGTGAACGGCAAGCTGTTCGGCGGCCTC GTCGCGACGGCGGTCGGCACGTTCACGATGCTCGTGTGGCTGTCGCCGTGGCGTCGCGAGCGGATCTTCGCGTATCTCGA TCCGTGGGACGAACGCTACGCGCAGGGCAAGGCATACCAGCTCACGCACTCGCTGATCGCGTTCGGCCGCGGCGAGTGGT TGGGCGTGGGCCTCGGCGGCAGCGTCGAGAAGCTGAACTACCTGCCCGAAGCGCATACCGACTTCATCCTCGCGGTGATC GGCGAGGAGCTCGGCTTCGTCGGCGTGCTGGTCGTGATCCTGCTGTTCTACTGGATCGTGCGCCGCGCGTTCGAGATCGG CCGCCAGGCGCTCGCGCTCGACCGCACGTTCGCGGGCCTGACGGCGAAGGGCATCGGCATCTGGTTCGGTGCGCAGACGT TCATCAACATGGGCGTGAACCTCGGCCTGCTGCCGACCAAGGGCCTGACACTGCCGCTCGTGAGCTACGGCGGTTCGGGC ATTCTGCTGAATTGCGTCGCGCTCGCGGTGCTGCTGCGGGTCGATTATGAAAATCGCGTATTGATGCGGGGAGGGAAGGT ATGA
Upstream 100 bases:
>100_bases CCGCTTGCGCGAGCCTCGACATGTTCAGGAACTACGCCCACCGCGCTGACGTGTTCCGCGCGGCCGTGGACGAAATCGCC ATCGACAAAGGAGCGACGAC
Downstream 100 bases:
>100_bases CCTCCCCGTGTCAGTACGCGATTTCGGCGAAGGCTAACTTCGTGCGCGCAGCGTGCGAAGTTAAGCGTAGCGGCCGTAGC CAAAACATTGATTCATTCTT
Product: cell division protein FtsW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSWSDRLVSRFNDRRGTGGNAAGGRVASATRAATGGLASVVNGVRPSRSRMLDFDYSLLWVAIALLGLGVVMVYSASIAM PDSPKYAAYHDYAFLMRHCVSLGVAFIAAVIAFRVPVSTWDKYAPHLFLIALVGLVIVLIPHVGKGVNGARRWIPLGITN MQPSEIMKLAVTIYAANYTVRKQEYMQSFAKGFLPMAFAVGLVGALLLLEPDMGAFMVVAAIAMGVLFLGGVNGKLFGGL VATAVGTFTMLVWLSPWRRERIFAYLDPWDERYAQGKAYQLTHSLIAFGRGEWLGVGLGGSVEKLNYLPEAHTDFILAVI GEELGFVGVLVVILLFYWIVRRAFEIGRQALALDRTFAGLTAKGIGIWFGAQTFINMGVNLGLLPTKGLTLPLVSYGGSG ILLNCVALAVLLRVDYENRVLMRGGKV
Sequences:
>Translated_427_residues MSWSDRLVSRFNDRRGTGGNAAGGRVASATRAATGGLASVVNGVRPSRSRMLDFDYSLLWVAIALLGLGVVMVYSASIAM PDSPKYAAYHDYAFLMRHCVSLGVAFIAAVIAFRVPVSTWDKYAPHLFLIALVGLVIVLIPHVGKGVNGARRWIPLGITN MQPSEIMKLAVTIYAANYTVRKQEYMQSFAKGFLPMAFAVGLVGALLLLEPDMGAFMVVAAIAMGVLFLGGVNGKLFGGL VATAVGTFTMLVWLSPWRRERIFAYLDPWDERYAQGKAYQLTHSLIAFGRGEWLGVGLGGSVEKLNYLPEAHTDFILAVI GEELGFVGVLVVILLFYWIVRRAFEIGRQALALDRTFAGLTAKGIGIWFGAQTFINMGVNLGLLPTKGLTLPLVSYGGSG ILLNCVALAVLLRVDYENRVLMRGGKV >Mature_426_residues SWSDRLVSRFNDRRGTGGNAAGGRVASATRAATGGLASVVNGVRPSRSRMLDFDYSLLWVAIALLGLGVVMVYSASIAMP DSPKYAAYHDYAFLMRHCVSLGVAFIAAVIAFRVPVSTWDKYAPHLFLIALVGLVIVLIPHVGKGVNGARRWIPLGITNM QPSEIMKLAVTIYAANYTVRKQEYMQSFAKGFLPMAFAVGLVGALLLLEPDMGAFMVVAAIAMGVLFLGGVNGKLFGGLV ATAVGTFTMLVWLSPWRRERIFAYLDPWDERYAQGKAYQLTHSLIAFGRGEWLGVGLGGSVEKLNYLPEAHTDFILAVIG EELGFVGVLVVILLFYWIVRRAFEIGRQALALDRTFAGLTAKGIGIWFGAQTFINMGVNLGLLPTKGLTLPLVSYGGSGI LLNCVALAVLLRVDYENRVLMRGGKV
Specific function: This is a septum-peptidoglycan biosynthetic protein, involved in cell wall formation. Plays a role in the stabilization of the ftsZ ring during cell division [H]
COG id: COG0772
COG function: function code D; Bacterial cell division membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsW/rodA/spoVE family [H]
Homologues:
Organism=Escherichia coli, GI1786277, Length=378, Percent_Identity=43.3862433862434, Blast_Score=299, Evalue=2e-82, Organism=Escherichia coli, GI1786853, Length=343, Percent_Identity=30.9037900874636, Blast_Score=140, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001182 - InterPro: IPR018365 - InterPro: IPR013437 [H]
Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]
EC number: NA
Molecular weight: Translated: 46219; Mature: 46088
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWSDRLVSRFNDRRGTGGNAAGGRVASATRAATGGLASVVNGVRPSRSRMLDFDYSLLW CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHEECCCHHHHH VAIALLGLGVVMVYSASIAMPDSPKYAAYHDYAFLMRHCVSLGVAFIAAVIAFRVPVSTW HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH DKYAPHLFLIALVGLVIVLIPHVGKGVNGARRWIPLGITNMQPSEIMKLAVTIYAANYTV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHEECCCCH RKQEYMQSFAKGFLPMAFAVGLVGALLLLEPDMGAFMVVAAIAMGVLFLGGVNGKLFGGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH VATAVGTFTMLVWLSPWRRERIFAYLDPWDERYAQGKAYQLTHSLIAFGRGEWLGVGLGG HHHHHHHHHHHHHHCCHHHCCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCC SVEKLNYLPEAHTDFILAVIGEELGFVGVLVVILLFYWIVRRAFEIGRQALALDRTFAGL CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TAKGIGIWFGAQTFINMGVNLGLLPTKGLTLPLVSYGGSGILLNCVALAVLLRVDYENRV EECCEEEEEHHHHHHHCCCCCCEECCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCCCCEE LMRGGKV ECCCCCC >Mature Secondary Structure SWSDRLVSRFNDRRGTGGNAAGGRVASATRAATGGLASVVNGVRPSRSRMLDFDYSLLW CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHEECCCHHHHH VAIALLGLGVVMVYSASIAMPDSPKYAAYHDYAFLMRHCVSLGVAFIAAVIAFRVPVSTW HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH DKYAPHLFLIALVGLVIVLIPHVGKGVNGARRWIPLGITNMQPSEIMKLAVTIYAANYTV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHEECCCCH RKQEYMQSFAKGFLPMAFAVGLVGALLLLEPDMGAFMVVAAIAMGVLFLGGVNGKLFGGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH VATAVGTFTMLVWLSPWRRERIFAYLDPWDERYAQGKAYQLTHSLIAFGRGEWLGVGLGG HHHHHHHHHHHHHHCCHHHCCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCC SVEKLNYLPEAHTDFILAVIGEELGFVGVLVVILLFYWIVRRAFEIGRQALALDRTFAGL CHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TAKGIGIWFGAQTFINMGVNLGLLPTKGLTLPLVSYGGSGILLNCVALAVLLRVDYENRV EECCEEEEEHHHHHHHCCCCCCEECCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCCCCEE LMRGGKV ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]