| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is zntB [H]
Identifier: 115350450
GI number: 115350450
Start: 446072
End: 447100
Strand: Direct
Name: zntB [H]
Synonym: Bamb_0396
Alternate gene names: 115350450
Gene position: 446072-447100 (Clockwise)
Preceding gene: 115350449
Following gene: 115350453
Centisome position: 12.54
GC content: 66.57
Gene sequence:
>1029_bases ATGGACCTGATCGTACAGACTTACGGTGCCGATACGTCCGGCATGGTGTGCGGATTCCGCTTCGTCCCGGGCGGAGCGGG CGTGATGCTCGACGCCGAAGCGGCCGCGGCATGGCTGCGCACGTGCCGCGCGCGCGATGCGAGCGCCTCGGACGATTTCG TCTGGCTGCATTTCAATCTGGCGCACGGCGCGAGCGAGCGCTGGATGCGCACCCACCTCGGATTGCCCGACAGCTTCTTC GAATTCCTGCACGAAGGGTCGCGTTCGACGCGCATCGAGCAGGAGGACGGCGCACTGCGTGCGATCGTCAACGACGTGAT GTTCAATCTCGAACTGACGCCGTCGGAAATCGCGACGCTGTTCGTGCACGTCGAACGGCGCATCATGGTCACCGCGCGGC TCAAGCCGCTGCGCTCGGTCGACACGCTGCGCGCAGGCGTGCGCGACGGCGAGCGGTTCCGGTCGCCGGTCGAGCTGCTC GTGCACCTGCTGCACGACCAGGCCGACCTGCTGATCCAGATCATGCGGCGCACGAGCGTCGACGTCGATCGCATCGAGGA TCGCTTCCTGTCGCAGCGGCTCACGTCGAATCGCGTCGAACTCGGCGCGATGCGCCGCACGTTGACGCGCCTGCAGCGCA TGCTGGCGCCCGAGCCCGGCTCGATCTTCCGGCTGCTCGCGAAACCGCCCGCGTGGCTGCATCCCGAAGACGTGCAGGAG CTGCGCGAGTCGACCGAGGAGTTCTCGCTCGTGCTCGCCGATCTGTCCGGGCTCAACGAGCGGATCAAGCTGTTGCAGGA AGAGATCGGCTCACGCCTCGACGAGCAGAACAACCGGACGCTGTTCACGCTGACGCTCGTGACCGTGATCGCGCTGCCGA TCAACATCGTCGCGGGCTTCTTCGGGATGAACGTCGGCGGCGTGCCGTTCTCCGAGAACAAGCACGGCTTCTGGCTGATG GTGCTGCTCGTCGCGGGCTTTACCGCGCTCGCCGCGTGGTGGGCGTTTCGTCGGCGCGACGATCGCTAG
Upstream 100 bases:
>100_bases GAACGTCACATCCGTCGGGCATACGTTTCGTTTCATTTCCCGGCGTGGCGCCGCGAGGCGCGATGCGCGGCGCGGCGCGC GCCGCACGACCTTCGACACG
Downstream 100 bases:
>100_bases CTAGTCCTTGCCGGTGCGGCGCGAACGATACCGACAAAAAAACAGGCCCCGCATGCGGGGCCTGCCGAAGGACGTGAGGA CTTGAACGCCGGCCGGCGCC
Product: Mg2+ transporter protein, CorA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MDLIVQTYGADTSGMVCGFRFVPGGAGVMLDAEAAAAWLRTCRARDASASDDFVWLHFNLAHGASERWMRTHLGLPDSFF EFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATLFVHVERRIMVTARLKPLRSVDTLRAGVRDGERFRSPVELL VHLLHDQADLLIQIMRRTSVDVDRIEDRFLSQRLTSNRVELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHPEDVQE LRESTEEFSLVLADLSGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGFFGMNVGGVPFSENKHGFWLM VLLVAGFTALAAWWAFRRRDDR
Sequences:
>Translated_342_residues MDLIVQTYGADTSGMVCGFRFVPGGAGVMLDAEAAAAWLRTCRARDASASDDFVWLHFNLAHGASERWMRTHLGLPDSFF EFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATLFVHVERRIMVTARLKPLRSVDTLRAGVRDGERFRSPVELL VHLLHDQADLLIQIMRRTSVDVDRIEDRFLSQRLTSNRVELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHPEDVQE LRESTEEFSLVLADLSGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGFFGMNVGGVPFSENKHGFWLM VLLVAGFTALAAWWAFRRRDDR >Mature_342_residues MDLIVQTYGADTSGMVCGFRFVPGGAGVMLDAEAAAAWLRTCRARDASASDDFVWLHFNLAHGASERWMRTHLGLPDSFF EFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATLFVHVERRIMVTARLKPLRSVDTLRAGVRDGERFRSPVELL VHLLHDQADLLIQIMRRTSVDVDRIEDRFLSQRLTSNRVELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHPEDVQE LRESTEEFSLVLADLSGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGFFGMNVGGVPFSENKHGFWLM VLLVAGFTALAAWWAFRRRDDR
Specific function: Mediates efflux of zinc ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=292, Percent_Identity=21.9178082191781, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 38753; Mature: 38753
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLIVQTYGADTSGMVCGFRFVPGGAGVMLDAEAAAAWLRTCRARDASASDDFVWLHFNL CCEEEEECCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEE AHGASERWMRTHLGLPDSFFEFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATL CCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEECHHHHHHH FVHVERRIMVTARLKPLRSVDTLRAGVRDGERFRSPVELLVHLLHDQADLLIQIMRRTSV HHHHHHHHEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DVDRIEDRFLSQRLTSNRVELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHPEDVQE CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHH LRESTEEFSLVLADLSGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGF HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH FGMNVGGVPFSENKHGFWLMVLLVAGFTALAAWWAFRRRDDR HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLIVQTYGADTSGMVCGFRFVPGGAGVMLDAEAAAAWLRTCRARDASASDDFVWLHFNL CCEEEEECCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEE AHGASERWMRTHLGLPDSFFEFLHEGSRSTRIEQEDGALRAIVNDVMFNLELTPSEIATL CCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEECHHHHHHH FVHVERRIMVTARLKPLRSVDTLRAGVRDGERFRSPVELLVHLLHDQADLLIQIMRRTSV HHHHHHHHEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DVDRIEDRFLSQRLTSNRVELGAMRRTLTRLQRMLAPEPGSIFRLLAKPPAWLHPEDVQE CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHH LRESTEEFSLVLADLSGLNERIKLLQEEIGSRLDEQNNRTLFTLTLVTVIALPINIVAGF HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHH FGMNVGGVPFSENKHGFWLMVLLVAGFTALAAWWAFRRRDDR HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA