The gene/protein map for NC_008390 is currently unavailable.
Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350419

Identifier: 115350419

GI number: 115350419

Start: 404330

End: 405241

Strand: Direct

Name: 115350419

Synonym: Bamb_0364

Alternate gene names: NA

Gene position: 404330-405241 (Clockwise)

Preceding gene: 115350418

Following gene: 115350420

Centisome position: 11.37

GC content: 54.5

Gene sequence:

>912_bases
GTGGAAGAGGGCAGCCATCGTATCCCGTACGCGTTACACCACAAAGATTGGGTATACGGAACGCAGAGCGCGGAAGAATT
GCGGAGCACTGGGGAACCCATCGAGCCGCCCGAATATCGTCCGGAAATGGCCGGCAAAATATTCTGTCCGGCCTGCACGA
CTCCCCTGAGCAGGACCCCGAAGGCGGCGGATGTGTTTACAAACAGCCGAACAGCGCACTTCAAGCACCAGCCTGCGTTT
AAGGACGTACCGTGCAGTCTGCGCACAAAACGTGGCCCAGGGTTGCACTACACCACTGAAGAAGAGCTGAAGCGCGCCGC
CCAGAGCGAGGAACTGGTCATAGTTGGAGGGTGGCAGAATCAACCCCCCGTGCAACCAATCGACGAAATGGATCCCGATG
GTGCATACAATCTCACACAAATCGAAGATCCCGACGGCCCTCTCACTGAAGTTCCGCTAGGTCGGCACACCGGTGAACGC
TTCTTCTTGCCAAGTAAGCTGTCCACGGTACTGGCTATCTGCCGAAATTTCGATAGAAACCTTGCGCGCGGCTTCTTTTT
CCCAGATAGCCAGTACGCAACGCTTCTGGTCGACAAACTTTTTGACATCGCCCTTTTGACGGACGAGCCGCCACCGAACG
CTCACCTGTTCTATGGCCGGGTGCGTTCCGTGTCTCGCCTGAACCGCCGCGACAAGCTGACCCTAGAATCCGACGAAGGT
ATTCAAGTAAAGGTATATACATGGCCCGAACACAATGATCGCAAGAAGATCTCTAGTTCCGCCATTGGGCGCATGCTTTT
GTTCTATGCGAGCCTCTACAAAGAGAATGATGGAATCCTTGCATGTAAAATAGACGCGTGGGGAGCCTACAGCTTGCTCC
CGGAAAAATACGAGCATTGTTTGCCTGATTGA

Upstream 100 bases:

>100_bases
GCAACCATCGCGTGGCTTCGCGCTTGATTGATTAGACAAATAATGCCAACCTAAATTATGAGAGCGGCTCGCATTGTCAT
TTGAACCTTCGGAGGACGTC

Downstream 100 bases:

>100_bases
TATCGGACTTCTCTGAAGTTGGGTTGTCCTCCCTTATTGAGGAACGCGCAGTTTTCATCACGACGCCTCAAATTGCGATC
CTTGCAAGCTTGGATGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MEEGSHRIPYALHHKDWVYGTQSAEELRSTGEPIEPPEYRPEMAGKIFCPACTTPLSRTPKAADVFTNSRTAHFKHQPAF
KDVPCSLRTKRGPGLHYTTEEELKRAAQSEELVIVGGWQNQPPVQPIDEMDPDGAYNLTQIEDPDGPLTEVPLGRHTGER
FFLPSKLSTVLAICRNFDRNLARGFFFPDSQYATLLVDKLFDIALLTDEPPPNAHLFYGRVRSVSRLNRRDKLTLESDEG
IQVKVYTWPEHNDRKKISSSAIGRMLLFYASLYKENDGILACKIDAWGAYSLLPEKYEHCLPD

Sequences:

>Translated_303_residues
MEEGSHRIPYALHHKDWVYGTQSAEELRSTGEPIEPPEYRPEMAGKIFCPACTTPLSRTPKAADVFTNSRTAHFKHQPAF
KDVPCSLRTKRGPGLHYTTEEELKRAAQSEELVIVGGWQNQPPVQPIDEMDPDGAYNLTQIEDPDGPLTEVPLGRHTGER
FFLPSKLSTVLAICRNFDRNLARGFFFPDSQYATLLVDKLFDIALLTDEPPPNAHLFYGRVRSVSRLNRRDKLTLESDEG
IQVKVYTWPEHNDRKKISSSAIGRMLLFYASLYKENDGILACKIDAWGAYSLLPEKYEHCLPD
>Mature_303_residues
MEEGSHRIPYALHHKDWVYGTQSAEELRSTGEPIEPPEYRPEMAGKIFCPACTTPLSRTPKAADVFTNSRTAHFKHQPAF
KDVPCSLRTKRGPGLHYTTEEELKRAAQSEELVIVGGWQNQPPVQPIDEMDPDGAYNLTQIEDPDGPLTEVPLGRHTGER
FFLPSKLSTVLAICRNFDRNLARGFFFPDSQYATLLVDKLFDIALLTDEPPPNAHLFYGRVRSVSRLNRRDKLTLESDEG
IQVKVYTWPEHNDRKKISSSAIGRMLLFYASLYKENDGILACKIDAWGAYSLLPEKYEHCLPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34376; Mature: 34376

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEGSHRIPYALHHKDWVYGTQSAEELRSTGEPIEPPEYRPEMAGKIFCPACTTPLSRTP
CCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHCCCEEECCCCCCCCCCCC
KAADVFTNSRTAHFKHQPAFKDVPCSLRTKRGPGLHYTTEEELKRAAQSEELVIVGGWQN
CHHHHHCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCC
QPPVQPIDEMDPDGAYNLTQIEDPDGPLTEVPLGRHTGERFFLPSKLSTVLAICRNFDRN
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHH
LARGFFFPDSQYATLLVDKLFDIALLTDEPPPNAHLFYGRVRSVSRLNRRDKLTLESDEG
HHHCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEHHHHHHHHHHCCCCCEEEECCCC
IQVKVYTWPEHNDRKKISSSAIGRMLLFYASLYKENDGILACKIDAWGAYSLLPEKYEHC
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCHHHHHHC
LPD
CCC
>Mature Secondary Structure
MEEGSHRIPYALHHKDWVYGTQSAEELRSTGEPIEPPEYRPEMAGKIFCPACTTPLSRTP
CCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHCCCEEECCCCCCCCCCCC
KAADVFTNSRTAHFKHQPAFKDVPCSLRTKRGPGLHYTTEEELKRAAQSEELVIVGGWQN
CHHHHHCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCC
QPPVQPIDEMDPDGAYNLTQIEDPDGPLTEVPLGRHTGERFFLPSKLSTVLAICRNFDRN
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHH
LARGFFFPDSQYATLLVDKLFDIALLTDEPPPNAHLFYGRVRSVSRLNRRDKLTLESDEG
HHHCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEHHHHHHHHHHCCCCCEEEECCCC
IQVKVYTWPEHNDRKKISSSAIGRMLLFYASLYKENDGILACKIDAWGAYSLLPEKYEHC
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCHHHHHHC
LPD
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA