| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is mlaC [H]
Identifier: 115350391
GI number: 115350391
Start: 381993
End: 382625
Strand: Direct
Name: mlaC [H]
Synonym: Bamb_0336
Alternate gene names: 115350391
Gene position: 381993-382625 (Clockwise)
Preceding gene: 115350390
Following gene: 115350392
Centisome position: 10.74
GC content: 62.09
Gene sequence:
>633_bases ATGATGAAAAAACTGTTCCTGATTCCCGTTTTCGCGGCGCTGTTCTCGTTCGGCAGCGCAGCTCACGCGCAAGTCGACCA GTCGAACCCGCAGGCGCTGATCAAGACGGCGACCCAGCAGGTGCTCGACGAGGTCAAGCAGCAGACGATCAAGCAGGGCG ACACCAACCGCATCATCACCATCGTCAACAAGGACATCCTGCCGTACACGGATTTCCGTCGCACCACGCAGCTCGCGATG GGCCGCAACTGGCGCGCGGCGTCGGCCGAGCAGCAGCAGCAGGTTCAGGAGCAGTTCAAGCTGCTGCTGATCCGCACGTA TTCGGGCGCGCTCGCGCAGCTGAAGCCGGATCAACAAATCCAGTACCCGCCGTTCCGCGCCGATCCGGCCGACACCGACG TCGTCGTGAAGACGGTCGCGCTGAACAACGGCCAGCCGGTCCAGATCGACTACCGCCTGTACAAGACGGCCAACGGCTGG AAGGTGTATGACCTGAACGTGCTCGGCGCGTGGCTGATCCAGACGTACCAGCAGCAGTTCAACGAGAAGATCCAGCAAAG CGGCGTGGACGGCCTGATCAAGTTCCTGACGCAGCGCAACCAGGAACTTGCCGCGGGCAAGCAAGCCTCGTGA
Upstream 100 bases:
>100_bases ACATTCGTTACAGCCGGAAACGATTCAGTCGGTAGCGTTCGCGAACTTGCGCGTAAGCTACCGGCTCCAACCTCCGCATC GACTCTTCATGCAGGTCACT
Downstream 100 bases:
>100_bases GCGGCTTCGCGGCCGGCTCCTCGCTGACCGTCGCGAGCGCGAAGTCCGCGCTCGCGGACGGTCTCGCGCGCATCGACGCG GGCGCCACCGCCGTCGATTG
Product: toluene tolerance family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTNRIITIVNKDILPYTDFRRTTQLAM GRNWRAASAEQQQQVQEQFKLLLIRTYSGALAQLKPDQQIQYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKTANGW KVYDLNVLGAWLIQTYQQQFNEKIQQSGVDGLIKFLTQRNQELAAGKQAS
Sequences:
>Translated_210_residues MMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTNRIITIVNKDILPYTDFRRTTQLAM GRNWRAASAEQQQQVQEQFKLLLIRTYSGALAQLKPDQQIQYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKTANGW KVYDLNVLGAWLIQTYQQQFNEKIQQSGVDGLIKFLTQRNQELAAGKQAS >Mature_210_residues MMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTNRIITIVNKDILPYTDFRRTTQLAM GRNWRAASAEQQQQVQEQFKLLLIRTYSGALAQLKPDQQIQYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKTANGW KVYDLNVLGAWLIQTYQQQFNEKIQQSGVDGLIKFLTQRNQELAAGKQAS
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=203, Percent_Identity=26.6009852216749, Blast_Score=74, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 23773; Mature: 23773
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTNRIIT CCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IVNKDILPYTDFRRTTQLAMGRNWRAASAEQQQQVQEQFKLLLIRTYSGALAQLKPDQQI EECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEHHHCCCCHHHHCCCCCCC QYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKTANGWKVYDLNVLGAWLIQTYQQQF CCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHH NEKIQQSGVDGLIKFLTQRNQELAAGKQAS HHHHHHCCHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure MMKKLFLIPVFAALFSFGSAAHAQVDQSNPQALIKTATQQVLDEVKQQTIKQGDTNRIIT CCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IVNKDILPYTDFRRTTQLAMGRNWRAASAEQQQQVQEQFKLLLIRTYSGALAQLKPDQQI EECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEHHHCCCCHHHHCCCCCCC QYPPFRADPADTDVVVKTVALNNGQPVQIDYRLYKTANGWKVYDLNVLGAWLIQTYQQQF CCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHH NEKIQQSGVDGLIKFLTQRNQELAAGKQAS HHHHHHCCHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]