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The map label for this gene is thiO [H]

Identifier: 115350383

GI number: 115350383

Start: 375283

End: 376419

Strand: Direct

Name: thiO [H]

Synonym: Bamb_0328

Alternate gene names: 115350383

Gene position: 375283-376419 (Clockwise)

Preceding gene: 115350381

Following gene: 115350384

Centisome position: 10.55

GC content: 74.14

Gene sequence:

>1137_bases
ATGAACGTCCACGCTTCCCGGCCGGATTTCGCGGTGCTAGGCGGCGGCCTCGTCGGCCGGCTGATCGCCTGGCGGCTCGC
GGGCGACGGGCATCGCGTCGCGCTGTACGAGCGCGGCGGCCCGGACGGCGAGCAATCGGCCGCGTGGATCGCGGCCGCGA
TGCTTGCGCCGCTCGCCGAGGCGGCGAGCGCCGAACTGCTGATCACCGAGCTCGGCGCCGCGTCGCTCGCGCGCTGGCCG
CAATGGCTCGCGGAGCTGCCCGAACCGGTGTTCTTCCAGCATCACGGCACGCTCGTCGTCTGGCATCACGCGGATCGGGC
GGAGGCGCCGCTGTTCGAGCGGCGCGTGCGCGCGAACGCGCCGGCCGAGCTGTTCGACGGCGGCTTCGTCACGCTGGCCG
GCGCGCAGGTCGACGCGGCCGAGCCCGCGCTCGCGGGGCGCTTCGCGCGCGGCCTGCTGCTGCCGCGCGAAGGGCAGCTC
GATAATCGTCAGGCGCTGCGCGCGCTGGCGGCGGGCCTCGCGCAGCGCGGCGTCGAGCTGCACTGGCACGCGACGATCGA
CGACGCGAACCGGCCCGACGCACATTTCACGATCGATTGCCGCGGTCTCGGCGCGAAAGCCGCGCTGCCCGCGCTGCGCG
GCATCCGCGGCGAAGTCGCGCGGGTGCACGCGCCGGGCATCGGGCTCACGCGGCCCGTGCGGCTGTTGCATCCGCGCTAT
CCGCTGTACATCGCGCCGAAGCAGGACGACCTGTACGTGATCGGCGCAACCGAGGTGGAGGGCGAGGACATGTCGCCCGT
CAGCGTGCGCTCCGCGCTCGAACTGCTGAGCGCGGCGTTCTCCGTGCACCCGGCGTTCGGCGAGGCGCGCATCCTCGAAC
TGAATGCGCAGTGCCGCCCGACGCTGCCCGACCACCGCCCGGCGGTGATCTGGGACGGCGCGACGACGCTCGCCGTCAAC
GGCCTGTACCGGCACGGCTTCATGATCGCGCCGGAAGTCGCGCATGCGGCGGTCGCGTTCGCGCAGGCCGCGCTCGGCGG
CGCGTTCGCCGATGCCGATGCGTTCGCCGCATGGCGCGATGCCGCGCGCTGGCCGGCGCTCCTTCATCACCGCGACGACG
TGCGCCAGCCGGCCTGA

Upstream 100 bases:

>100_bases
GCGCTGTTCCCGATCCGCTGTCGCGTGCGTTGGCACGGGACGGCGCGCGCGTGTCGACGTCCGTCGCACGAGCACGCGCG
GTTCGCGGGGAGGGTGCGCG

Downstream 100 bases:

>100_bases
TGCGCGCCGCCGACCGAATTCGATCAAGCCTCATGGACATCCAGATCAACCAACAGACCCTGACGCTGCCCGACGGCGCG
ACGGTGGCCGACGCACTCGC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNVHASRPDFAVLGGGLVGRLIAWRLAGDGHRVALYERGGPDGEQSAAWIAAAMLAPLAEAASAELLITELGAASLARWP
QWLAELPEPVFFQHHGTLVVWHHADRAEAPLFERRVRANAPAELFDGGFVTLAGAQVDAAEPALAGRFARGLLLPREGQL
DNRQALRALAAGLAQRGVELHWHATIDDANRPDAHFTIDCRGLGAKAALPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
PLYIAPKQDDLYVIGATEVEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNAQCRPTLPDHRPAVIWDGATTLAVN
GLYRHGFMIAPEVAHAAVAFAQAALGGAFADADAFAAWRDAARWPALLHHRDDVRQPA

Sequences:

>Translated_378_residues
MNVHASRPDFAVLGGGLVGRLIAWRLAGDGHRVALYERGGPDGEQSAAWIAAAMLAPLAEAASAELLITELGAASLARWP
QWLAELPEPVFFQHHGTLVVWHHADRAEAPLFERRVRANAPAELFDGGFVTLAGAQVDAAEPALAGRFARGLLLPREGQL
DNRQALRALAAGLAQRGVELHWHATIDDANRPDAHFTIDCRGLGAKAALPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
PLYIAPKQDDLYVIGATEVEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNAQCRPTLPDHRPAVIWDGATTLAVN
GLYRHGFMIAPEVAHAAVAFAQAALGGAFADADAFAAWRDAARWPALLHHRDDVRQPA
>Mature_378_residues
MNVHASRPDFAVLGGGLVGRLIAWRLAGDGHRVALYERGGPDGEQSAAWIAAAMLAPLAEAASAELLITELGAASLARWP
QWLAELPEPVFFQHHGTLVVWHHADRAEAPLFERRVRANAPAELFDGGFVTLAGAQVDAAEPALAGRFARGLLLPREGQL
DNRQALRALAAGLAQRGVELHWHATIDDANRPDAHFTIDCRGLGAKAALPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
PLYIAPKQDDLYVIGATEVEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNAQCRPTLPDHRPAVIWDGATTLAVN
GLYRHGFMIAPEVAHAAVAFAQAALGGAFADADAFAAWRDAARWPALLHHRDDVRQPA

Specific function: May have amino acid oxidase activity in the biosynthesis of thiazole when cysteine gives its thiol group to be inserted into the thiazole molecule and the rest of the molecule is deaminated to give pyruvic acid and ammonia [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR012727 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 40532; Mature: 40532

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVHASRPDFAVLGGGLVGRLIAWRLAGDGHRVALYERGGPDGEQSAAWIAAAMLAPLAE
CCCCCCCCCEEEECCHHHHHHHHHEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
AASAELLITELGAASLARWPQWLAELPEPVFFQHHGTLVVWHHADRAEAPLFERRVRANA
HCCCEEEEEHHCHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHCCC
PAELFDGGFVTLAGAQVDAAEPALAGRFARGLLLPREGQLDNRQALRALAAGLAQRGVEL
CHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
HWHATIDDANRPDAHFTIDCRGLGAKAALPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
EEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCCC
PLYIAPKQDDLYVIGATEVEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNAQCRP
CEEEECCCCCEEEEEECEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
TLPDHRPAVIWDGATTLAVNGLYRHGFMIAPEVAHAAVAFAQAALGGAFADADAFAAWRD
CCCCCCCEEEECCCCEEEECCHHHCCEEECHHHHHHHHHHHHHHHCCHHHCHHHHHHHHH
AARWPALLHHRDDVRQPA
HHHHHHHHHCCHHCCCCC
>Mature Secondary Structure
MNVHASRPDFAVLGGGLVGRLIAWRLAGDGHRVALYERGGPDGEQSAAWIAAAMLAPLAE
CCCCCCCCCEEEECCHHHHHHHHHEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
AASAELLITELGAASLARWPQWLAELPEPVFFQHHGTLVVWHHADRAEAPLFERRVRANA
HCCCEEEEEHHCHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHCCC
PAELFDGGFVTLAGAQVDAAEPALAGRFARGLLLPREGQLDNRQALRALAAGLAQRGVEL
CHHHHCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
HWHATIDDANRPDAHFTIDCRGLGAKAALPALRGIRGEVARVHAPGIGLTRPVRLLHPRY
EEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCCC
PLYIAPKQDDLYVIGATEVEGEDMSPVSVRSALELLSAAFSVHPAFGEARILELNAQCRP
CEEEECCCCCEEEEEECEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
TLPDHRPAVIWDGATTLAVNGLYRHGFMIAPEVAHAAVAFAQAALGGAFADADAFAAWRD
CCCCCCCEEEECCCCEEEECCHHHCCEEECHHHHHHHHHHHHHHHCCHHHCHHHHHHHHH
AARWPALLHHRDDVRQPA
HHHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371431 [H]