Click here to switch to the map view.

The map label for this gene is rpoC

Identifier: 116251533

GI number:

Start: 1867111

End: 1871319

Strand: Direct

Name: rpoC

Synonym: RL1767

Alternate gene names: NA

Gene position: NA

Preceding gene: 116251532

Following gene: 116251535

Centisome position: NA

GC content: NA

Gene sequence:

>4209_bases
ATGAACCAAGAGGTCATGAATCTTTTCAATCCGCAGGTGCCTGCACAGAATTTCGATTCCATTCGGATTTCGATCGCGTC
TCCGGAGAAGATCCTCTCCTGGTCTTACGGTGAGATCAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCGGAAC
GTGACGGTCTGTTCTGCGCGCGCATCTTCGGGCCGATCAAGGACTACGAATGCCTGTGCGGCAAGTACAAGCGCATGAAG
TACAAGGGCATCATCTGCGAAAAGTGCGGCGTCGAAGTCACGCTGTCGCGCGTTCGCCGTGAGCGCATGGGCCATATCGA
GCTCGCCGCTCCCGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCATCACGCATTTCGACGCTGCTCGACATGACGCTGA
AGGATGTCGAGCGCGTCCTCTACTTCGAAAACTACATCGTCACCGAGCCGGGCCTGACCGCCCTGAAGGAGCACCAGCTT
CTCTCGGAAGAAGAGTACATGCTCGCTGTCGACGAATACGGCGAAGACCAGTTCACCGCGATGATCGGCGCCGAGGCGAT
CTACGAGATGCTGGCCTCGATGAACCTCGAAAAGATCGCTGGCGACCTGCGCGCCGAGCTTGCCGACACCACGTCGGATC
TCAAGCAGAAGAAGCTGATGAAGCGCCTGAAGATCGTCGAGAACTTCATGGAGTCGGGCAACCGTCCGGAATGGATGATC
ATGAAGGTCGTTCCGGTCATTCCGCCGGATCTGCGTCCGCTGGTTCCGCTCGACGGCGGCCGTTTCGCGACGTCGGATCT
GAACGATCTCTACCGCCGCGTCATCAACCGTAACAACCGTCTGAAGCGTCTGATCGAGCTTCGTGCGCCTGGCATCATCA
TCCGCAACGAAAAGCGCATGCTGCAGGAATCCGTTGACGCGCTGTTCGACAACGGCCGTCGCGGCCGTGTCATCACCGGC
GCCAACAAGCGTCCGCTGAAGTCGCTCTCCGATATGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTCGGCAA
GCGCGTCGACTATTCCGGCCGTTCGGTCATCGTCACCGGTCCGGAACTGAAGCTGCACCAGTGCGGTCTGCCGAAGAAGA
TGGCGCTCGAGCTCTTCAAGCCGTTCATCTATGCCCGTCTCGATGCCAAGGGTTACTCCTCGACCGTCAAGCAGGCCAAG
AAGCTGGTCGAGAAGGAAAAGCCGGAAGTCTGGGATATCCTCGACGAGGTCATCCGCGAGCATCCGGTTCTCTTGAACCG
CGCACCGACGTTGCACCGCCTGGGCATCCAGGCCTTCGAACCTATCCTGGTCGAAGGCAAGGCGATCCAGCTGCATCCGC
TCGTCTGCACGGCCTTCAACGCCGACTTCGACGGCGACCAGATGGCCGTTCACGTGCCGCTGTCGCTCGAAGCTCAGCTC
GAAGCCCGCGTGCTGATGATGTCGACCAACAACATCCTGCATCCGGCCAACGGCGCGCCGATCATCGTTCCCTCGCAGGA
CATGGTTCTCGGCCTCTACTATCTGTCGATCCTCAACCAGAACGAGCCGGGCGAAGGCATGGCCTTCTCCGATCTCGGCG
AGCTGCATCACGCCCTCGAAAGCAAGGTCGTTACGCTGCACACCAAGATCCGCGGCCGCTTCAAGTCGGTCGACGAGGAT
GGCAAGCCTTACTCGAAGATCTATGAGACGACGCCTGGCCGTCTGCTCATCGGCGAACTGCTGCCGAAGAACGGCAAGGT
GCCGTTCGATATCTGCAACCAGGAAATGACCAAGAAGAACATCTCCAAGATGATCGACACGGTCTATCGCCATTGCGGTC
AGAAGGACACGGTCATTTTCTGCGACCGCATCATGCAGCTCGGCTTCGCCCACGCCTGCCGCGCCGGCATTTCGTTCGGC
AAGGACGACATGGTCATTCCGGATGCCAAGGCCAAGATCGTTGCCGACACCGAAAATCTGGTGAAGGAATACGAGCAGCA
GTACAATGACGGCCTCATCACCCAGGGCGAGAAGTACAACAAGGTTGTCGACGCCTGGGGCAAGGCGACCGAAAAGGTCG
CCGAAGAGATGATGGCGCGCATCAAGGCGGTCGAATTCGACGAGAAGACCGGTCGCCAGAAGCCGATGAACTCGATCTAT
ATGATGAGCCACTCTGGTGCCCGCGGTTCTCCGAACCAGATGCGCCAGTTGGGCGGCATGCGTGGCCTCATGGCCAAGCC
GTCGGGCGAAATCATCGAGACCCCGATCATCTCGAACTTCAAGGAAGGCCTGACCGTCAACGAGTACTTCAACTCGACGC
ACGGCGCCCGCAAGGGTCTGGCAGACACCGCCCTGAAGACCGCCAACTCCGGCTACCTGACCCGCCGTCTCGTCGACGTC
GCGCAGGATTGCATCGTCACGCATGTCGATTGCGGAACGCAGACGGGCCTCACCATGACCGCCATCGTCGATGCCGGCCA
GGTGGTTGCCTCGATCGGCGCCCGCATCCTCGGCCGCACGGCGCTCGACGACATCGATCATCCGGTCACGGGTGAGCGCA
TCGTCGATGCCGGCAAGATGATCCTTGAGCCCGACGTCGTCGAAATCGAGAAGGCCGGCATCCAGTCGATCCGCATCCGC
TCGGCACTGACCTGCGAAATCCAGACGGGCGTCTGCTCGGTCTGTTACGGCCGCGACCTCGCGCGCGGTACGCCGGTCAA
TATGGGCGAAGCCGTCGGCGTCATCGCTGCTCAGTCGATCGGCGAGCCGGGCACCCAGCTCACCATGCGTACCTTCCACC
TTGGCGGTACGGCAACCGTGGTCGACCAGTCGTTCCTCGAAGCGTCGTACGAAGGTACGGTGCAGATCAAGAACCGCAAC
ATCCTGCGCAACTCCGATGGCAACCTCGTTGCCATGGGCCGCAACATGACCGTCCAGATCCTGGACGAACGTGGTGTCGA
GCGGTCGTCGCAGCGTGTGGCCTATGGTTCGAAGCTGCATGTCGACGAAGGCGACAAGGTCAAGCGCGGCCAGCGCCTGG
CGGAGTGGGACCCCTACACCCGTCCGATGATGACGGAAGTGGCCGGTACCGTTCAGTTTGAAGATCTGGTCGACGGTCTC
TCCGTTCTGGAAGCGACCGACGAATCGACCGGCATCACCAAGCGTCAGGTTATCGACTGGCGTTCGACCCCGCGCGGCTC
GGACCTCAAGCCGGCGATCGTCATCAAGGATGCCAGCGGCAATATCGCGAAGCTGTCTCGTGGTGGTGACGCCCGCTTCT
TCCTCTCGGTCGATGCGATCCTGTCGGTCGAGCCGGGCACGAAGGTCTCCCAGGGTGACGTTCTCGCCCGTTCGCCGCTC
GAAAGCGCCAAGACCAAGGACATCACCGGCGGTCTGCCGCGTGTTGCCGAGCTGTTCGAAGCCCGCCGTCCGAAGGACCA
CGCCATCATCGCAGAGATCGATGGTACGATCCGTCTCGGCCGCGACTACAAGAACAAGCGTCGCGTCATCATCGAGCCGG
CGGAAGACGGTGTCGAGCCTGTCGAATACCTGATCCCGAAGGGCAAGCCCTTCCACCTTCAGGAAGGCGACTATATCGAA
AAGGGTGACTACATCCTCGACGGTAACCCGGCTCCGCACGACATCCTGGCAATCAAGGGCGTGGAGGCTCTGGCCTCCTA
CCTCGTCAACGAGATCCAGGAAGTCTACCGCCTGCAGGGCGTCGTCATCAACGACAAGCACATCGAGGTGATTGTCCGTC
AGATGCTGCAGAAGGTGGAAATCACCGATGCAGGCGACTCGACCTATATCGTCGGCGACAATGTCGACCGGATCGAGCTC
GAAGACGTCAACGATCACCTGATCGAGCAGGGCAAGAAGCCAGCCTACGGCGATCCGGTTCTTCTCGGCATCACCAAGGC
GTCGCTGCAGACCCCGTCCTTCATCTCGGCCGCGTCCTTCCAGGAAACGACCAAGGTGCTGACGGAAGCTGCAATCGCCG
GCAAGACCGACGGCTTGCAGGGTCTGAAGGAAAACGTCATCGTCGGCCGTCTTATCCCGGCCGGTACCGGCGGCACCATG
ACCCAGATCCGCCGCATCGCCACGTCGCGCGACGAGATGATCCTCGAAGAACGCCGCAAGGGCACGGGTGCTGCCGTCGC
CACGCCGATGCTGCAGGACATGGCCGAAAAGGCTCCGGCTGCGGAATAA

Upstream 100 bases:

>100_bases
ATCCAGCGGTTATTCTCGTTTAAGCGAGGGAGGCGGCTCCCGGGAATTTGCCGCCGACCATTGCATTTTGAGGGCGCTTT
AGCCCATGAAGGAGACAGGC

Downstream 100 bases:

>100_bases
TCCGCGGTTGAAGTCGACGAATTGAAAAAACCGCTCGGAGCGATCCGGGCGGTTTTTCATATTTAGGTTGCTCTGATTGG
GCGGGCGGGGAGGGCGGCTG

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1402_residues
MNQEVMNLFNPQVPAQNFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMK
YKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRISTLLDMTLKDVERVLYFENYIVTEPGLTALKEHQL
LSEEEYMLAVDEYGEDQFTAMIGAEAIYEMLASMNLEKIAGDLRAELADTTSDLKQKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRMLQESVDALFDNGRRGRVITG
ANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAK
KLVEKEKPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDLGELHHALESKVVTLHTKIRGRFKSVDED
GKPYSKIYETTPGRLLIGELLPKNGKVPFDICNQEMTKKNISKMIDTVYRHCGQKDTVIFCDRIMQLGFAHACRAGISFG
KDDMVIPDAKAKIVADTENLVKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDEKTGRQKPMNSIY
MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGLADTALKTANSGYLTRRLVDV
AQDCIVTHVDCGTQTGLTMTAIVDAGQVVASIGARILGRTALDDIDHPVTGERIVDAGKMILEPDVVEIEKAGIQSIRIR
SALTCEIQTGVCSVCYGRDLARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRN
ILRNSDGNLVAMGRNMTVQILDERGVERSSQRVAYGSKLHVDEGDKVKRGQRLAEWDPYTRPMMTEVAGTVQFEDLVDGL
SVLEATDESTGITKRQVIDWRSTPRGSDLKPAIVIKDASGNIAKLSRGGDARFFLSVDAILSVEPGTKVSQGDVLARSPL
ESAKTKDITGGLPRVAELFEARRPKDHAIIAEIDGTIRLGRDYKNKRRVIIEPAEDGVEPVEYLIPKGKPFHLQEGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVEITDAGDSTYIVGDNVDRIEL
EDVNDHLIEQGKKPAYGDPVLLGITKASLQTPSFISAASFQETTKVLTEAAIAGKTDGLQGLKENVIVGRLIPAGTGGTM
TQIRRIATSRDEMILEERRKGTGAAVATPMLQDMAEKAPAAE

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA