Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

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The map label for this gene is 116249369

Identifier: 116249369

GI number: 116249369

Start: 765573

End: 766019

Strand: Reverse

Name: 116249369

Synonym: pRL120707

Alternate gene names: NA

Gene position: 766019-765573 (Counterclockwise)

Preceding gene: 116249373

Following gene: 116249368

Centisome position: 88.05

GC content: 60.4

Gene sequence:

>447_bases
GTGCCGTATTTGGATAGTCTTCCGCTTCCCGGGAGGGTGACCCATTTGGCTGCTGACTGCGCACCATTGCTTCGATCGAT
ACGCCTTAGCGCCGCCCTGTCGGCTTGCGCACTGTGCCTCGCCTCCTGGAGCATAGAGACCGATCGATCCACTGAAGACA
CGCATGGCCTGTTCGAAATCCGCGAGGAGGCCAGGCGCTTCATTTCGCAGGAGAACGCCAAGGGGCATCAGCAATGGGAC
GCGCTGGAGCCTAACATGAAGACGCTGGTTCCCCGATGCGCGGTTCCGCTCGAAACACGGTGGACGCCGAAGAGCTATGG
CCGCTCGAAACCGAGCGTGATGGTCATATGCACGGCCTCGGTGCCCAACACCGTGATGAGACGTTGGGATGTACATGTTC
CGGTAGAGCGGAAGCCAAATCAGACGGGAAGCCCCGCCCCGTTCTGA

Upstream 100 bases:

>100_bases
ATGTGCAGACATCGTCGGCCGCACTGGCGCCGGATCGATGGGATGCGCTCCGTTCGCGCATCAAAGGCCCTGGATTTCCG
CAGACGGACCTTGAAGGTTT

Downstream 100 bases:

>100_bases
AAGAGCAGGCGCCCGAACGGGACTTGATGTATCCGAATGAATCACTGCGATTGCAATAAAGGCGACCAGACGTGAATCCA
TCGGTGGAATTGTGTTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MPYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEIREEARRFISQENAKGHQQWD
ALEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTASVPNTVMRRWDVHVPVERKPNQTGSPAPF

Sequences:

>Translated_148_residues
MPYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEIREEARRFISQENAKGHQQWD
ALEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTASVPNTVMRRWDVHVPVERKPNQTGSPAPF
>Mature_147_residues
PYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEIREEARRFISQENAKGHQQWDA
LEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTASVPNTVMRRWDVHVPVERKPNQTGSPAPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16537; Mature: 16406

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
REEARRFISQENAKGHQQWDALEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTAS
HHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEECC
VPNTVMRRWDVHVPVERKPNQTGSPAPF
CCHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PYLDSLPLPGRVTHLAADCAPLLRSIRLSAALSACALCLASWSIETDRSTEDTHGLFEI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
REEARRFISQENAKGHQQWDALEPNMKTLVPRCAVPLETRWTPKSYGRSKPSVMVICTAS
HHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEECC
VPNTVMRRWDVHVPVERKPNQTGSPAPF
CCHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA