| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249367
Identifier: 116249367
GI number: 116249367
Start: 763828
End: 764598
Strand: Reverse
Name: 116249367
Synonym: pRL120705
Alternate gene names: NA
Gene position: 764598-763828 (Counterclockwise)
Preceding gene: 116249368
Following gene: 116249366
Centisome position: 87.88
GC content: 60.96
Gene sequence:
>771_bases ATGAAACTATTGGAGGGCGGACGAACCGGGCAGATCTGGCGTGACGGCAACACCGTGATCAGGCCTTCCGGCGCATGGAC GCCGACGGTGCACCGGTTTTTGCGCCATCTGAGCAGCAGAGGCTTTCCGGGAGCGCCTGATCCCATTGAAATAACCGGGA ACCAGGAAGTCGTCAGTTATGTCGGCGGGCGCGTCTGCGAAGACTTGAGCGACCATTTTGTCGGGTCGGAGCGCATGCTG CTTTCCTCCGCCAGGCTTCTACGCGATTTTCACTCGGCATCTCAAGGGTTTATCGAATCGGACCGCGAGATCCAGACATG GATGCTGCCGCCCCAGGAGCCGCGCGAGATCATATGCCACGGCGACTATGCGCCCTACAACGTCGCTACGGCAGACCATG AGGCTGTCGGGATCATCGATTTCGATACCGCCCATCCCGCACCGCGCCTATGGGATCTGGCCTATTCGGTTTACCGCTGG GCGCCGCTCTCCGATCCCGCCAATCCCGACGTGACCTTCGGCCTCGACGATCAGCTCCGGCGGGCGGAGGTCTTTTGCAC GGCCTATGGGGCGACGGCGGAGGAACGGCTCCAGCTCCCCGAGATGATCTGCCGGCGGCTTCAGGCGCTCATCGATTTCA TGCTGGCAAGAGCGGCGGCCGGAGATGAGACATTCGTGGAGGACATGGTTGCAGGAGATGCTCAGCTGTATTCGAGCGAC ATGGACTATGTTCGAAGGCATCAGGATCGGCTGCTGAATGCCCTGTGCTGA
Upstream 100 bases:
>100_bases GGCGTTCTACCGGAACTGCCATGAGACAAACCTTGGCGCGACCGTTCAGGCCCATATCGAAAAGCTGAAATTCGCATAGA GGACGTCTGGAGACCGGAAA
Downstream 100 bases:
>100_bases CGGAAGGATAGTCTGGCCATCGGACAAGCCCTGGGACCACTATGACATTTTAATCTCACGCGCCCGCCCAGCGCATGGAA TAGCTATGGGCTGATCTCCA
Product: putative transposase related protein
Products: NA
Alternate protein names: Trifolitoxin Immunity Protein; Phosphotransferase; Phosphotransferase Family Protein; Kinase; Aminoglycoside Phosphotransferase Protein; TfxG-Like Immunity Protein Against TfxA-Like Peptides; TfxG-Like Protein; Homoserine Kinase Type II; Transposase Related Protein; Antibiotic Resistance Protein
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKLLEGGRTGQIWRDGNTVIRPSGAWTPTVHRFLRHLSSRGFPGAPDPIEITGNQEVVSYVGGRVCEDLSDHFVGSERML LSSARLLRDFHSASQGFIESDREIQTWMLPPQEPREIICHGDYAPYNVATADHEAVGIIDFDTAHPAPRLWDLAYSVYRW APLSDPANPDVTFGLDDQLRRAEVFCTAYGATAEERLQLPEMICRRLQALIDFMLARAAAGDETFVEDMVAGDAQLYSSD MDYVRRHQDRLLNALC
Sequences:
>Translated_256_residues MKLLEGGRTGQIWRDGNTVIRPSGAWTPTVHRFLRHLSSRGFPGAPDPIEITGNQEVVSYVGGRVCEDLSDHFVGSERML LSSARLLRDFHSASQGFIESDREIQTWMLPPQEPREIICHGDYAPYNVATADHEAVGIIDFDTAHPAPRLWDLAYSVYRW APLSDPANPDVTFGLDDQLRRAEVFCTAYGATAEERLQLPEMICRRLQALIDFMLARAAAGDETFVEDMVAGDAQLYSSD MDYVRRHQDRLLNALC >Mature_256_residues MKLLEGGRTGQIWRDGNTVIRPSGAWTPTVHRFLRHLSSRGFPGAPDPIEITGNQEVVSYVGGRVCEDLSDHFVGSERML LSSARLLRDFHSASQGFIESDREIQTWMLPPQEPREIICHGDYAPYNVATADHEAVGIIDFDTAHPAPRLWDLAYSVYRW APLSDPANPDVTFGLDDQLRRAEVFCTAYGATAEERLQLPEMICRRLQALIDFMLARAAAGDETFVEDMVAGDAQLYSSD MDYVRRHQDRLLNALC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28769; Mature: 28769
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLEGGRTGQIWRDGNTVIRPSGAWTPTVHRFLRHLSSRGFPGAPDPIEITGNQEVVSY CCCCCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHH VGGRVCEDLSDHFVGSERMLLSSARLLRDFHSASQGFIESDREIQTWMLPPQEPREIICH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEECCCCCCCCEEEEE GDYAPYNVATADHEAVGIIDFDTAHPAPRLWDLAYSVYRWAPLSDPANPDVTFGLDDQLR CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHH RAEVFCTAYGATAEERLQLPEMICRRLQALIDFMLARAAAGDETFVEDMVAGDAQLYSSD HHHHEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH MDYVRRHQDRLLNALC HHHHHHHHHHHHHHCC >Mature Secondary Structure MKLLEGGRTGQIWRDGNTVIRPSGAWTPTVHRFLRHLSSRGFPGAPDPIEITGNQEVVSY CCCCCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHH VGGRVCEDLSDHFVGSERMLLSSARLLRDFHSASQGFIESDREIQTWMLPPQEPREIICH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEECCCCCCCCEEEEE GDYAPYNVATADHEAVGIIDFDTAHPAPRLWDLAYSVYRWAPLSDPANPDVTFGLDDQLR CCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHH RAEVFCTAYGATAEERLQLPEMICRRLQALIDFMLARAAAGDETFVEDMVAGDAQLYSSD HHHHEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH MDYVRRHQDRLLNALC HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA