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The map label for this gene is yesO [H]

Identifier: 116249342

GI number: 116249342

Start: 729914

End: 731137

Strand: Direct

Name: yesO [H]

Synonym: pRL120679

Alternate gene names: 116249342

Gene position: 729914-731137 (Clockwise)

Preceding gene: 116249341

Following gene: 116249343

Centisome position: 83.9

GC content: 61.85

Gene sequence:

>1224_bases
ATGAAGGTTCTGAAGAAAACGCTTTTGCTTGCCGCTATAGGCAGCAGTCTTTTTGCCACAGCCGCATCGGCCGAGCAGGT
CAACCTGACCTGGCAGATGTGGACCGGCTCCGAAACCGACACCAAGAGTTGGCAGCACGTGGCAGAGATGGTGACGGCCA
AGTATCCCGACATCAAGGTGACGCTGACGACGACGGGCTGGGTCGACTACTGGACGCGGCTGCCGGTGCTGGCGGCATCG
GGACAGCTCGCCGACATCGTTTCCATGCAGTCGCTGCGCATGCCGAACTTCTATTCGCTGCTCGAGCCCCTGAATGACCG
GATCGAGGCCGATAAGTTCGACGTCGCCGCCTTCACCCCTTCGATCATCGGCGGCATGTCCGTCGACAAGCAGCTCTACG
GTCTGCCCTACGACGTCGGTCCGTGGGTCATCTATTATAACCAGGATGCGCTCGAAGCCGCCGGCGTCCCGCTGCCGAAA
CCGGGCTGGACGCTTGCCGAGTTCACCGATGCCGCCAAGAAGCTGACGAAGGACGGCAATTACGGCTTTGGCGTCACTCC
GACCAACTATTCGGTCCTGGCCGCGGCCTGGGGCGATAAATACGTCAACGACGCCGGCGAGCTTGACTTGACCCGTGCGA
GCGCAGTTGCCGCCGCCGACAGGCTGATCGGATTTGCCGCCAAGGATAAGATCGCGCCGCTGGTTCCCTCGGGTGGCGCA
GATCCCGGTGATGTCGTCCAGGGCCGGTTCAATTCGGGCAACGTCGCCATGTATATCGATGGTCCCTGGTCGATTATCGG
CATGAAGGACCAGGCTAAGTTCAAGATCGGCCTCACCACCCTGCCGCGCGACGAAGGCGAACTCTCGGCCGTCACAGCAG
GCTCCGGCTTCGGTATTTCCACGACCAGCAAGAACAAGGATGCGGCCTGGAAGGCCATTCAGGTGCTGACAAGCCCCGAA
GCGCTGACCTATCTTGCCGAAGGGGGGCGCGCGTTGCCGGCGCGCACGGCGGCGCAATCGGCCTGGTACAAGGTGGCGGC
CAAGGACATCACCAATGGCGGCGAGGCCATCGACTATTCCCTGGCGCACTCCGTGCCCTACGTGATCACCAACAACTGGG
CAGCGGTGGAAAACCTCTTCAACCAGTATTTCCCGCCGGCTTTCGCCGGCAGCGCCGACGCCAAGCAGACGATGGAATCC
ATCCAGAGCCTTGCGCAGCAATAG

Upstream 100 bases:

>100_bases
GGCGCCCGGACGTTACCGTGCCGGTGATCGAGATCGTCCTGAAGGCGTGAGCTCGATCGCACTCGCGTGTCCTTTGCGTT
CATGGAGGGAGGAGAAACCC

Downstream 100 bases:

>100_bases
AGCCAGCGCGTCCGACAGGACGCGCCGTCGCTTCAAAATCTGCGCATGATCCTTTCGGGAAATCGATTCCGATTTTCGGG
TCATGCGCCAGCTCTCGCTG

Product: putative substrate-binding component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKVLKKTLLLAAIGSSLFATAASAEQVNLTWQMWTGSETDTKSWQHVAEMVTAKYPDIKVTLTTTGWVDYWTRLPVLAAS
GQLADIVSMQSLRMPNFYSLLEPLNDRIEADKFDVAAFTPSIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEAAGVPLPK
PGWTLAEFTDAAKKLTKDGNYGFGVTPTNYSVLAAAWGDKYVNDAGELDLTRASAVAAADRLIGFAAKDKIAPLVPSGGA
DPGDVVQGRFNSGNVAMYIDGPWSIIGMKDQAKFKIGLTTLPRDEGELSAVTAGSGFGISTTSKNKDAAWKAIQVLTSPE
ALTYLAEGGRALPARTAAQSAWYKVAAKDITNGGEAIDYSLAHSVPYVITNNWAAVENLFNQYFPPAFAGSADAKQTMES
IQSLAQQ

Sequences:

>Translated_407_residues
MKVLKKTLLLAAIGSSLFATAASAEQVNLTWQMWTGSETDTKSWQHVAEMVTAKYPDIKVTLTTTGWVDYWTRLPVLAAS
GQLADIVSMQSLRMPNFYSLLEPLNDRIEADKFDVAAFTPSIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEAAGVPLPK
PGWTLAEFTDAAKKLTKDGNYGFGVTPTNYSVLAAAWGDKYVNDAGELDLTRASAVAAADRLIGFAAKDKIAPLVPSGGA
DPGDVVQGRFNSGNVAMYIDGPWSIIGMKDQAKFKIGLTTLPRDEGELSAVTAGSGFGISTTSKNKDAAWKAIQVLTSPE
ALTYLAEGGRALPARTAAQSAWYKVAAKDITNGGEAIDYSLAHSVPYVITNNWAAVENLFNQYFPPAFAGSADAKQTMES
IQSLAQQ
>Mature_407_residues
MKVLKKTLLLAAIGSSLFATAASAEQVNLTWQMWTGSETDTKSWQHVAEMVTAKYPDIKVTLTTTGWVDYWTRLPVLAAS
GQLADIVSMQSLRMPNFYSLLEPLNDRIEADKFDVAAFTPSIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEAAGVPLPK
PGWTLAEFTDAAKKLTKDGNYGFGVTPTNYSVLAAAWGDKYVNDAGELDLTRASAVAAADRLIGFAAKDKIAPLVPSGGA
DPGDVVQGRFNSGNVAMYIDGPWSIIGMKDQAKFKIGLTTLPRDEGELSAVTAGSGFGISTTSKNKDAAWKAIQVLTSPE
ALTYLAEGGRALPARTAAQSAWYKVAAKDITNGGEAIDYSLAHSVPYVITNNWAAVENLFNQYFPPAFAGSADAKQTMES
IQSLAQQ

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43621; Mature: 43621

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKKTLLLAAIGSSLFATAASAEQVNLTWQMWTGSETDTKSWQHVAEMVTAKYPDIKV
CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE
TLTTTGWVDYWTRLPVLAASGQLADIVSMQSLRMPNFYSLLEPLNDRIEADKFDVAAFTP
EEEECCHHHHHHHCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECH
SIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEAAGVPLPKPGWTLAEFTDAAKKLTKDGN
HHHCCCCCCHHHCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
YGFGVTPTNYSVLAAAWGDKYVNDAGELDLTRASAVAAADRLIGFAAKDKIAPLVPSGGA
CCCCCCCCCCEEEEEECCCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DPGDVVQGRFNSGNVAMYIDGPWSIIGMKDQAKFKIGLTTLPRDEGELSAVTAGSGFGIS
CHHHHEECEECCCCEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCEEEEECCCCCCCC
TTSKNKDAAWKAIQVLTSPEALTYLAEGGRALPARTAAQSAWYKVAAKDITNGGEAIDYS
CCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEH
LAHSVPYVITNNWAAVENLFNQYFPPAFAGSADAKQTMESIQSLAQQ
HHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLKKTLLLAAIGSSLFATAASAEQVNLTWQMWTGSETDTKSWQHVAEMVTAKYPDIKV
CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEE
TLTTTGWVDYWTRLPVLAASGQLADIVSMQSLRMPNFYSLLEPLNDRIEADKFDVAAFTP
EEEECCHHHHHHHCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECH
SIIGGMSVDKQLYGLPYDVGPWVIYYNQDALEAAGVPLPKPGWTLAEFTDAAKKLTKDGN
HHHCCCCCCHHHCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
YGFGVTPTNYSVLAAAWGDKYVNDAGELDLTRASAVAAADRLIGFAAKDKIAPLVPSGGA
CCCCCCCCCCEEEEEECCCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DPGDVVQGRFNSGNVAMYIDGPWSIIGMKDQAKFKIGLTTLPRDEGELSAVTAGSGFGIS
CHHHHEECEECCCCEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCEEEEECCCCCCCC
TTSKNKDAAWKAIQVLTSPEALTYLAEGGRALPARTAAQSAWYKVAAKDITNGGEAIDYS
CCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEH
LAHSVPYVITNNWAAVENLFNQYFPPAFAGSADAKQTMESIQSLAQQ
HHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]