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The map label for this gene is nanR [C]

Identifier: 116249265

GI number: 116249265

Start: 651206

End: 651904

Strand: Reverse

Name: nanR [C]

Synonym: pRL120600

Alternate gene names: 116249265

Gene position: 651904-651206 (Counterclockwise)

Preceding gene: 116249270

Following gene: 116249264

Centisome position: 74.93

GC content: 61.23

Gene sequence:

>699_bases
ATGATTTCGACGAGACCGAAGGAACCCTCAACGGGCACAACCCAGATACCGCGCGCCAACAGCCTGGCGGGCGACGTCTA
CGAGGCAATTTTCAACCAGCTCATGTCGTTGAAGATTGCACCGGGGACGCGCATCACGGTCGACAACCTGGTCAAGGAGT
TCAACGTCTCCCATACGCCGATCCGCGAAGCCCTCGGCCGGCTTGAAGGCGAAGGCCTCGTCGTCAAGCAGCATCTCGTT
GGCTATCGTGCCGCGCCGCAGATCACGCGCCACCGCTTCGACGAGCTCTATGAACTGCGCCTGCTGCTGGAACCCGCCGG
CGCTGCGAAGGCAGCCGAGGCGATGAATGACGAAAAGCTGGCCATTCTCACCGAGGCCGCGGGCGTGATGACACGCAGCG
ACAACAGGGACGAACGAGCGAACTATTCGGCCTTCGCTCGCCAGGACGCCATCTTTCACGACCGAATCATGGAATTTGCC
GGCAACGAGTTGATCCGCGAGATGCTGACATTCCAGCACACGCATTTCCATATCTTCCGCCTGATGTTCCATCGCCGCGT
CACCGAGGAGGCGCTCGCCGAGCATCAGACGCTGCTCGATGCCTTTGCGGCGCGCGACCCGGGCGCGGCTGCGAACGCAA
TGCGCATTCATATCGAACATTCGCGCGACCGGCTGTTGCCGGCATTCGACGAAATCTGA

Upstream 100 bases:

>100_bases
GCATGATTTTTCCTCCCTATATTAAATCGTATAGGATATAGGATTGTCTTGGCCGCAGCATCGTGCTAGCGATTGAACCT
GTCAAGAGGCAAGGCAGCAG

Downstream 100 bases:

>100_bases
GCAACCGCGCCGGGCAAGGACCTGCCCGACCTGACAACGAGGAGGAGAACCCATGCCAGGCAAGAAAATCCTGATGCTCA
CCGGCGATTTCACCGAGGAG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; GntR-Family Transcriptional Regulator; Transcriptional Regulator; GntR Family Regulatory Protein; Transcriptional Regulator GntR Family Protein; Transcriptional Regulator GntR; GntR Family Transcription Regulator; GntR Family Regulator; GntR Family Transcriptional Regulator Protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MISTRPKEPSTGTTQIPRANSLAGDVYEAIFNQLMSLKIAPGTRITVDNLVKEFNVSHTPIREALGRLEGEGLVVKQHLV
GYRAAPQITRHRFDELYELRLLLEPAGAAKAAEAMNDEKLAILTEAAGVMTRSDNRDERANYSAFARQDAIFHDRIMEFA
GNELIREMLTFQHTHFHIFRLMFHRRVTEEALAEHQTLLDAFAARDPGAAANAMRIHIEHSRDRLLPAFDEI

Sequences:

>Translated_232_residues
MISTRPKEPSTGTTQIPRANSLAGDVYEAIFNQLMSLKIAPGTRITVDNLVKEFNVSHTPIREALGRLEGEGLVVKQHLV
GYRAAPQITRHRFDELYELRLLLEPAGAAKAAEAMNDEKLAILTEAAGVMTRSDNRDERANYSAFARQDAIFHDRIMEFA
GNELIREMLTFQHTHFHIFRLMFHRRVTEEALAEHQTLLDAFAARDPGAAANAMRIHIEHSRDRLLPAFDEI
>Mature_232_residues
MISTRPKEPSTGTTQIPRANSLAGDVYEAIFNQLMSLKIAPGTRITVDNLVKEFNVSHTPIREALGRLEGEGLVVKQHLV
GYRAAPQITRHRFDELYELRLLLEPAGAAKAAEAMNDEKLAILTEAAGVMTRSDNRDERANYSAFARQDAIFHDRIMEFA
GNELIREMLTFQHTHFHIFRLMFHRRVTEEALAEHQTLLDAFAARDPGAAANAMRIHIEHSRDRLLPAFDEI

Specific function: Sialic acid (NANA) and N-acetylmannosamine utilization [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26226; Mature: 26226

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTRPKEPSTGTTQIPRANSLAGDVYEAIFNQLMSLKIAPGTRITVDNLVKEFNVSHTP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHCCCCCH
IREALGRLEGEGLVVKQHLVGYRAAPQITRHRFDELYELRLLLEPAGAAKAAEAMNDEKL
HHHHHHHCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCE
AILTEAAGVMTRSDNRDERANYSAFARQDAIFHDRIMEFAGNELIREMLTFQHTHFHIFR
EEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMFHRRVTEEALAEHQTLLDAFAARDPGAAANAMRIHIEHSRDRLLPAFDEI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHCCC
>Mature Secondary Structure
MISTRPKEPSTGTTQIPRANSLAGDVYEAIFNQLMSLKIAPGTRITVDNLVKEFNVSHTP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHCCCCCH
IREALGRLEGEGLVVKQHLVGYRAAPQITRHRFDELYELRLLLEPAGAAKAAEAMNDEKL
HHHHHHHCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCE
AILTEAAGVMTRSDNRDERANYSAFARQDAIFHDRIMEFAGNELIREMLTFQHTHFHIFR
EEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMFHRRVTEEALAEHQTLLDAFAARDPGAAANAMRIHIEHSRDRLLPAFDEI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA