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The map label for this gene is dapA [H]

Identifier: 116249192

GI number: 116249192

Start: 572847

End: 573758

Strand: Direct

Name: dapA [H]

Synonym: pRL120528

Alternate gene names: 116249192

Gene position: 572847-573758 (Clockwise)

Preceding gene: 116249191

Following gene: 116249193

Centisome position: 65.84

GC content: 61.62

Gene sequence:

>912_bases
GTGAAGTTTGAGGGGATCTATACGCCGGCGGTGACGCCGCTCGACCAGAATGGTCAGATCGACAGGGCTGGATTTGCCGC
CGTGCTCGAATCGCTGATCGAGGCGGGCGTCCACGGCATCATCGTCGGAGGCTCGACGGGCGAGTACTACGCCCAGAGCA
GCCAGGAGCGTTTCGAGCTCGCGGCCTATGCGAGGGAAGTCATCGGCACGCGGCTGCCGCTCATTATCGGAACCGGCGCC
ACGCGGACCGAAGATTCGGTCGAATACGCAAAGGCGGCGAAGGAAATCGGCGCGGATGCAATCCTGGTGTCGTCACCGCC
ATACGCGCTGCCGACCGAACGCGAGAATGCGGTCCACGCCCTGACCGTCGACCGCGCGGCGAACCTGCCGATCATGCTCT
ACAACTATCCGGCCCGCATGGGCGTGATGATGGGCGAGGAGTATTTCTCCCGCCTCGGCAAGTCCAGGAACGTGATCGCC
ATCAAGGAAAGCTCCGGCGACATGGGCAATCTGCACCTGCTTGCCCGGAAATTTCCGCATATTGCTCTGTCCTGCGGATG
GGACGACCAGGCGCTCGAATTCTTCGCCTGGGGCGCGAAGAGCTGGGTCTGCGCCGGCTCCAATTTCCTGCCGCGCGAAC
ATGTCGCCCTCTACGAAGCCTGCGTGCTCGAAAAGAACTTCGACAAGGGTCGGGCGATCATGATGGCGATGCTGCCGCTC
ATGGATTTCCTGGAGTGCGGGAAGTTCGTTCAATCGATCAAGCACGGATGCGAATTGATCGGGCTGAATGTCGGATCGGT
CCGCGCGCCGCTGCGTCCGCTCAACTCCGAAGAAAAGCGAACCCTTCAGACCGTCGTCGCCACGTTGAAGCGCACGGTCG
CCCAGATCACCTCGGGAGTAAATCATGCATGA

Upstream 100 bases:

>100_bases
AATTGTCCCGCGAGAACATGGAAATGTTCATCGCCCCGCAAGGCCTCAAGGCGGACGCCTTCCTCGGCGGCCCCGCCACG
CAATTATTGGAGAAATCGTC

Downstream 100 bases:

>100_bases
ACCCTTGACCGCCTCCGAATACAAGGCGATCGCCGCCGGCCTTCAGTTTCCAACGAATGCCTTCATCGACGGCGCATTTC
GTCCGGCCAATTCCGGGCAG

Product: putative dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKFEGIYTPAVTPLDQNGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFELAAYAREVIGTRLPLIIGTGA
TRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHALTVDRAANLPIMLYNYPARMGVMMGEEYFSRLGKSRNVIA
IKESSGDMGNLHLLARKFPHIALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMMAMLPL
MDFLECGKFVQSIKHGCELIGLNVGSVRAPLRPLNSEEKRTLQTVVATLKRTVAQITSGVNHA

Sequences:

>Translated_303_residues
MKFEGIYTPAVTPLDQNGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFELAAYAREVIGTRLPLIIGTGA
TRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHALTVDRAANLPIMLYNYPARMGVMMGEEYFSRLGKSRNVIA
IKESSGDMGNLHLLARKFPHIALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMMAMLPL
MDFLECGKFVQSIKHGCELIGLNVGSVRAPLRPLNSEEKRTLQTVVATLKRTVAQITSGVNHA
>Mature_303_residues
MKFEGIYTPAVTPLDQNGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFELAAYAREVIGTRLPLIIGTGA
TRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHALTVDRAANLPIMLYNYPARMGVMMGEEYFSRLGKSRNVIA
IKESSGDMGNLHLLARKFPHIALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMMAMLPL
MDFLECGKFVQSIKHGCELIGLNVGSVRAPLRPLNSEEKRTLQTVVATLKRTVAQITSGVNHA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=287, Percent_Identity=26.8292682926829, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI13540533, Length=286, Percent_Identity=28.3216783216783, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI1786463, Length=287, Percent_Identity=32.0557491289199, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI87082415, Length=286, Percent_Identity=28.6713286713287, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1788823, Length=288, Percent_Identity=26.3888888888889, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1789620, Length=279, Percent_Identity=26.1648745519713, Blast_Score=101, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33025; Mature: 33025

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFEGIYTPAVTPLDQNGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFEL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHH
AAYAREVIGTRLPLIIGTGATRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHA
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEE
LTVDRAANLPIMLYNYPARMGVMMGEEYFSRLGKSRNVIAIKESSGDMGNLHLLARKFPH
EEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCC
IALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMMAMLPL
EEEECCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MDFLECGKFVQSIKHGCELIGLNVGSVRAPLRPLNSEEKRTLQTVVATLKRTVAQITSGV
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NHA
CCC
>Mature Secondary Structure
MKFEGIYTPAVTPLDQNGQIDRAGFAAVLESLIEAGVHGIIVGGSTGEYYAQSSQERFEL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHHHHH
AAYAREVIGTRLPLIIGTGATRTEDSVEYAKAAKEIGADAILVSSPPYALPTERENAVHA
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEE
LTVDRAANLPIMLYNYPARMGVMMGEEYFSRLGKSRNVIAIKESSGDMGNLHLLARKFPH
EEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCC
IALSCGWDDQALEFFAWGAKSWVCAGSNFLPREHVALYEACVLEKNFDKGRAIMMAMLPL
EEEECCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
MDFLECGKFVQSIKHGCELIGLNVGSVRAPLRPLNSEEKRTLQTVVATLKRTVAQITSGV
HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
NHA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA