| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is mhqO [H]
Identifier: 116249121
GI number: 116249121
Start: 491368
End: 492300
Strand: Reverse
Name: mhqO [H]
Synonym: pRL120456
Alternate gene names: 116249121
Gene position: 492300-491368 (Counterclockwise)
Preceding gene: 116249123
Following gene: 116249120
Centisome position: 56.58
GC content: 61.09
Gene sequence:
>933_bases ATGATCACGGATATCAAGGGACTGCATCACATCACGTCGATGGCATCGGATGCCCGCCAGAACAACGCGTTCTTCACGGA CACGCTCGGCCTGCGCCGCGTCAAGAAGACCGTGAATTTCGATGACCCCAATGTCTACCACCTTTATTACGGTGATGAGG CCGGCACCCCCGGCTCCGTCATGACCTACTTCCCTTTTCCCGACGTAATGCGCGGCCGACCCGGCGTCGGCGAAGTCGGC GAAACGCAGTTCGCAGTGCCGAAGGGCTCCCTCTCCTTCTGGCAGGATCGCCTGTCGGCAAAGGGAGCCGGGGAGCTGCA GGCCGGTACTGCCTTCGGTGCTGACCACCTGCTGTTCAAGGGGCCGGACGGTGAAGGGTTTGCCCTTGTTGAAGCGGAAG ACGATGGCCGCAAGGCCTGGACCGGTGCAGATATCGACGAAAGCGTCGGTATCCGCGGCTTTACCGGTGCCAAGTTCCGC CTGCATGACACCGCTGCCACGTCCGAACTGCTCGGTTTCATGGGATACCAGCGTGCCGAGACGGATGGCGATGTAACCCG CTTCATCATCCCCGGCGGCAATGGTGCGGACAAGATCGATCTCGAGCTTCTTCCGAAAACGCCTTTCGCAAGGCAGGGCG CGGGTTCGGTGCATCATATCGCTTTCGCCGTCAAGAATCGCGCAAAGCAGCTCGACGTCCGCAAGGCGCTGATGGATACG GGATACCAGGTAACACCCGTCATCGACCGTGATTACTTCTGGGCCATCTACTTCCGCACACCCGGCGGCGTGCTCTTCGA AATCGCCACGAACGAACCCGGTTTCGACCGCGACGAGGACACGGCGCATCTCGGCGAAGTTTTGAAACTGCCGGCCCGCT ACGAGCCCTATCGTGACCAGATCGAAGCCGGCCTGACGCCACTCGCCGCCTGA
Upstream 100 bases:
>100_bases ATTCACTGACAACTATTATTGCAATTCCGACCGCGGATCAACGGGCGTAGGTTTTCAATCACACCAGACAAACCAACGCA GCCGCGAAAGGGCGAGCATT
Downstream 100 bases:
>100_bases GGTCGCTTTCCAACAATACGGCGGCATAACTTTCAAGACGTGCCGCCTTGCCTGCCCCATTACCTACCTGCAACCCAATC AAAGGAAGACACGAGATGTC
Product: putative dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MITDIKGLHHITSMASDARQNNAFFTDTLGLRRVKKTVNFDDPNVYHLYYGDEAGTPGSVMTYFPFPDVMRGRPGVGEVG ETQFAVPKGSLSFWQDRLSAKGAGELQAGTAFGADHLLFKGPDGEGFALVEAEDDGRKAWTGADIDESVGIRGFTGAKFR LHDTAATSELLGFMGYQRAETDGDVTRFIIPGGNGADKIDLELLPKTPFARQGAGSVHHIAFAVKNRAKQLDVRKALMDT GYQVTPVIDRDYFWAIYFRTPGGVLFEIATNEPGFDRDEDTAHLGEVLKLPARYEPYRDQIEAGLTPLAA
Sequences:
>Translated_310_residues MITDIKGLHHITSMASDARQNNAFFTDTLGLRRVKKTVNFDDPNVYHLYYGDEAGTPGSVMTYFPFPDVMRGRPGVGEVG ETQFAVPKGSLSFWQDRLSAKGAGELQAGTAFGADHLLFKGPDGEGFALVEAEDDGRKAWTGADIDESVGIRGFTGAKFR LHDTAATSELLGFMGYQRAETDGDVTRFIIPGGNGADKIDLELLPKTPFARQGAGSVHHIAFAVKNRAKQLDVRKALMDT GYQVTPVIDRDYFWAIYFRTPGGVLFEIATNEPGFDRDEDTAHLGEVLKLPARYEPYRDQIEAGLTPLAA >Mature_310_residues MITDIKGLHHITSMASDARQNNAFFTDTLGLRRVKKTVNFDDPNVYHLYYGDEAGTPGSVMTYFPFPDVMRGRPGVGEVG ETQFAVPKGSLSFWQDRLSAKGAGELQAGTAFGADHLLFKGPDGEGFALVEAEDDGRKAWTGADIDESVGIRGFTGAKFR LHDTAATSELLGFMGYQRAETDGDVTRFIIPGGNGADKIDLELLPKTPFARQGAGSVHHIAFAVKNRAKQLDVRKALMDT GYQVTPVIDRDYFWAIYFRTPGGVLFEIATNEPGFDRDEDTAHLGEVLKLPARYEPYRDQIEAGLTPLAA
Specific function: Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 33914; Mature: 33914
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITDIKGLHHITSMASDARQNNAFFTDTLGLRRVKKTVNFDDPNVYHLYYGDEAGTPGSV CCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCE MTYFPFPDVMRGRPGVGEVGETQFAVPKGSLSFWQDRLSAKGAGELQAGTAFGADHLLFK EEECCCHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE GPDGEGFALVEAEDDGRKAWTGADIDESVGIRGFTGAKFRLHDTAATSELLGFMGYQRAE CCCCCCEEEEEECCCCCEEECCCCCHHCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCC TDGDVTRFIIPGGNGADKIDLELLPKTPFARQGAGSVHHIAFAVKNRAKQLDVRKALMDT CCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GYQVTPVIDRDYFWAIYFRTPGGVLFEIATNEPGFDRDEDTAHLGEVLKLPARYEPYRDQ CCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHH IEAGLTPLAA HHHCCCCCCC >Mature Secondary Structure MITDIKGLHHITSMASDARQNNAFFTDTLGLRRVKKTVNFDDPNVYHLYYGDEAGTPGSV CCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCE MTYFPFPDVMRGRPGVGEVGETQFAVPKGSLSFWQDRLSAKGAGELQAGTAFGADHLLFK EEECCCHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE GPDGEGFALVEAEDDGRKAWTGADIDESVGIRGFTGAKFRLHDTAATSELLGFMGYQRAE CCCCCCEEEEEECCCCCEEECCCCCHHCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCC TDGDVTRFIIPGGNGADKIDLELLPKTPFARQGAGSVHHIAFAVKNRAKQLDVRKALMDT CCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GYQVTPVIDRDYFWAIYFRTPGGVLFEIATNEPGFDRDEDTAHLGEVLKLPARYEPYRDQ CCEEEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCHHHH IEAGLTPLAA HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]