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The map label for this gene is yfiH [H]

Identifier: 116249024

GI number: 116249024

Start: 384250

End: 385173

Strand: Direct

Name: yfiH [H]

Synonym: pRL120355

Alternate gene names: 116249024

Gene position: 384250-385173 (Clockwise)

Preceding gene: 116249023

Following gene: 116249025

Centisome position: 44.17

GC content: 60.61

Gene sequence:

>924_bases
TTGAAACGGCTGGCAAGGCCCACGGATTTTGGTGAAGAACGGGATTTTGGTGAAGATCGGAGGATTTTGGTGAAGATCGG
CTTTTACACTTCGACATTCAACGATCGCCCCCTGGAGGAAGTGGTGGATTTCGCCGCATCGGCCAGGTTCGACGCCATCG
AGATCGACGTCGGCGGCCATATCAAGACGCCCGATCGAGTGGAGGCCGCCGTCGCGCTCGCGCGCAGCCGCGACCTCTTC
GTGTCGTCGATCACCTATTTCGGCAACCAGCTCGATGCCGACCGGGCAAAACGAACGGCACTTCGGGAAAGGACCACCGA
ATTTGCCGGCGCGATCGGGCAAGCGGGCGTCCCGATCTTCGTGATCTTCCCGGGCCGGGACGACACCGCAAGCGACGAAG
CCAATTATGATGACTTCGCCGATTTCGCCAACGGCCTGATCACTGAGACGGAGCCCTACGGCCTGACGGTTGCAATCGAG
AACTGGCCCGGTCCGAAGGACAATTTCATCGGGACGACGCCGAAAGGATGGCAGGAGCTTTTTCAAAGGATCGAGAACCC
CCGCTTCGGCCTGGAATTCGATCCCTCGCACCTCATTCGCATCGGCGTCGATCCTTATCGGGCGATGGAGGCGGTGAAGG
ATCGCATCGCCATCCTTCATGCCAAGGACACGGCAATCGATCGGGAGAGCCTGCAGGCTGTCGGTTATCACGGCAAGGGC
TGGTGGCAATACAAGCTGCCGGGGCTCGGCCTCATCGATTGGCCGAGGTTTCTGCGCCAGGCCCGCGGGGCCGGCTTCGA
CGGCACGCTGTCGATCGAACACGAGGATGGCGCCTATGGCTGGCCGGGCAAGGACTTAGCCGCGCGCAAAGACGGTGAGC
GCCTCGGCCTCGATTATTTGAGAAATGTCCTGAGCGGACTTTGA

Upstream 100 bases:

>100_bases
GGGCGGCGGTTATGCCGATGGCAGCAGCCCTCATGCTCGCATCGGCCGACGCGGCTCAACGCACACGTTCGCCACTCAAG
AACATGGATCGCCTGAACAG

Downstream 100 bases:

>100_bases
CAGCGATTTCGGGAGGACGGTAATGGCCCATGTTTCGGTCAACAATGCGCGCAAGGATTACGGCGCGTTCAAAGCCATCA
AAGGCGTGTCGGTCGATATC

Product: putative isomerase/epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKRLARPTDFGEERDFGEDRRILVKIGFYTSTFNDRPLEEVVDFAASARFDAIEIDVGGHIKTPDRVEAAVALARSRDLF
VSSITYFGNQLDADRAKRTALRERTTEFAGAIGQAGVPIFVIFPGRDDTASDEANYDDFADFANGLITETEPYGLTVAIE
NWPGPKDNFIGTTPKGWQELFQRIENPRFGLEFDPSHLIRIGVDPYRAMEAVKDRIAILHAKDTAIDRESLQAVGYHGKG
WWQYKLPGLGLIDWPRFLRQARGAGFDGTLSIEHEDGAYGWPGKDLAARKDGERLGLDYLRNVLSGL

Sequences:

>Translated_307_residues
MKRLARPTDFGEERDFGEDRRILVKIGFYTSTFNDRPLEEVVDFAASARFDAIEIDVGGHIKTPDRVEAAVALARSRDLF
VSSITYFGNQLDADRAKRTALRERTTEFAGAIGQAGVPIFVIFPGRDDTASDEANYDDFADFANGLITETEPYGLTVAIE
NWPGPKDNFIGTTPKGWQELFQRIENPRFGLEFDPSHLIRIGVDPYRAMEAVKDRIAILHAKDTAIDRESLQAVGYHGKG
WWQYKLPGLGLIDWPRFLRQARGAGFDGTLSIEHEDGAYGWPGKDLAARKDGERLGLDYLRNVLSGL
>Mature_307_residues
MKRLARPTDFGEERDFGEDRRILVKIGFYTSTFNDRPLEEVVDFAASARFDAIEIDVGGHIKTPDRVEAAVALARSRDLF
VSSITYFGNQLDADRAKRTALRERTTEFAGAIGQAGVPIFVIFPGRDDTASDEANYDDFADFANGLITETEPYGLTVAIE
NWPGPKDNFIGTTPKGWQELFQRIENPRFGLEFDPSHLIRIGVDPYRAMEAVKDRIAILHAKDTAIDRESLQAVGYHGKG
WWQYKLPGLGLIDWPRFLRQARGAGFDGTLSIEHEDGAYGWPGKDLAARKDGERLGLDYLRNVLSGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011418
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2; PF07582 AP_endonuc_2_N [H]

EC number: NA

Molecular weight: Translated: 34360; Mature: 34360

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLARPTDFGEERDFGEDRRILVKIGFYTSTFNDRPLEEVVDFAASARFDAIEIDVGGH
CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCC
IKTPDRVEAAVALARSRDLFVSSITYFGNQLDADRAKRTALRERTTEFAGAIGQAGVPIF
CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VIFPGRDDTASDEANYDDFADFANGLITETEPYGLTVAIENWPGPKDNFIGTTPKGWQEL
EEECCCCCCCCCCCCCHHHHHHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
FQRIENPRFGLEFDPSHLIRIGVDPYRAMEAVKDRIAILHAKDTAIDRESLQAVGYHGKG
HHHHCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCCC
WWQYKLPGLGLIDWPRFLRQARGAGFDGTLSIEHEDGAYGWPGKDLAARKDGERLGLDYL
EEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCHHHH
RNVLSGL
HHHHHCC
>Mature Secondary Structure
MKRLARPTDFGEERDFGEDRRILVKIGFYTSTFNDRPLEEVVDFAASARFDAIEIDVGGH
CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCC
IKTPDRVEAAVALARSRDLFVSSITYFGNQLDADRAKRTALRERTTEFAGAIGQAGVPIF
CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VIFPGRDDTASDEANYDDFADFANGLITETEPYGLTVAIENWPGPKDNFIGTTPKGWQEL
EEECCCCCCCCCCCCCHHHHHHHCCCEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
FQRIENPRFGLEFDPSHLIRIGVDPYRAMEAVKDRIAILHAKDTAIDRESLQAVGYHGKG
HHHHCCCCCCCEECCCCEEEECCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCCC
WWQYKLPGLGLIDWPRFLRQARGAGFDGTLSIEHEDGAYGWPGKDLAARKDGERLGLDYL
EEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCHHHH
RNVLSGL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377; 8704981 [H]