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The map label for this gene is yurM [H]

Identifier: 116249022

GI number: 116249022

Start: 382134

End: 382976

Strand: Direct

Name: yurM [H]

Synonym: pRL120353

Alternate gene names: 116249022

Gene position: 382134-382976 (Clockwise)

Preceding gene: 116249021

Following gene: 116249023

Centisome position: 43.92

GC content: 58.84

Gene sequence:

>843_bases
ATGAGCGGACGGACCGGAACGCGGCTCGGCGATGCCATGAGCTATCTGTTCATGCTGGTAATGTTCGTATTCTTCGCCGG
CCCCCTCACCTATCTCCTGTCGATGGCGATGCGTGACAAGCGCGAGATCTATCGCGGCGCCGCGCGATATATTCCAAACA
ATCCCACCATCGACAATTTCATCACCGTTTTGAACAACAGCTATTTTCCGATCTATCTCTGGAACGGCCTCAAGCTTGCC
GCCCTGAGCGGACTGGGCGTCCTGATCGTCGCACTGCCCGCGGCATATGCCTTTTCCCGCTTTCAGTTCCGGGGCAAGGG
CCTGTCGATGATGGGGCTGCTGCTCTTCCAGATGATCTCGCCGCTTGTCATCATGGTGCCGCTCTACCGCTACATGAACC
GCCTCGGCCTGCTGGATACGCATTTTGCCGTCGTCATGGTCTATATCGCACTTGGCGTTCCGCTGGCGACCTGGCTTCTG
AAGAGCTCGGTCGACGGCATCCCGCGCAGCCTCGACGAAGCGGCGATGATCGATGGCTGCAATCGATTTTCGGTCTTCTG
GCGCATCATTCTGCCACTATCGGCGCCGGGCATCGCCTCCGTCTTCATCATCACGGTGATTGCCGGCTGGTCGCAATTTC
TGGTGCCTTTTCTGTTGCTCACGAAAAATGATCTGATGCCGATCGGCGTCGGGATCTTTAACTTCCGCGGCATGCAAACC
GACTCGTCCATTCAGCTGCTTGCCGCCGCCTGCCTGATCGCGGTCGTTCCGGCGATCGTCGCCTTCCTGTCGCTCCAGCG
GCTGATCCTCGGTGCGATGACCAGCGGCGCGGTCAAGGGATGA

Upstream 100 bases:

>100_bases
ACGACCTGTCCGGCGGCAGCGTGCTCTCCGTGCTCATGCTGATCATCAGCCTCGGGCTTGCCTTTATCTATGCGTCGTTC
CTGCCGAAGGAGGAAGAGCA

Downstream 100 bases:

>100_bases
GGAGCGGTTCAAGCTATGCGCAAGGAAGGATTTCAAGCATGAACCAGACACTCGGCGCCAGACTGTCCCCGGATCTGACC
GGCGCCAATGTCGAAGATGC

Product: putative transmembrane permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSGRTGTRLGDAMSYLFMLVMFVFFAGPLTYLLSMAMRDKREIYRGAARYIPNNPTIDNFITVLNNSYFPIYLWNGLKLA
ALSGLGVLIVALPAAYAFSRFQFRGKGLSMMGLLLFQMISPLVIMVPLYRYMNRLGLLDTHFAVVMVYIALGVPLATWLL
KSSVDGIPRSLDEAAMIDGCNRFSVFWRIILPLSAPGIASVFIITVIAGWSQFLVPFLLLTKNDLMPIGVGIFNFRGMQT
DSSIQLLAAACLIAVVPAIVAFLSLQRLILGAMTSGAVKG

Sequences:

>Translated_280_residues
MSGRTGTRLGDAMSYLFMLVMFVFFAGPLTYLLSMAMRDKREIYRGAARYIPNNPTIDNFITVLNNSYFPIYLWNGLKLA
ALSGLGVLIVALPAAYAFSRFQFRGKGLSMMGLLLFQMISPLVIMVPLYRYMNRLGLLDTHFAVVMVYIALGVPLATWLL
KSSVDGIPRSLDEAAMIDGCNRFSVFWRIILPLSAPGIASVFIITVIAGWSQFLVPFLLLTKNDLMPIGVGIFNFRGMQT
DSSIQLLAAACLIAVVPAIVAFLSLQRLILGAMTSGAVKG
>Mature_279_residues
SGRTGTRLGDAMSYLFMLVMFVFFAGPLTYLLSMAMRDKREIYRGAARYIPNNPTIDNFITVLNNSYFPIYLWNGLKLAA
LSGLGVLIVALPAAYAFSRFQFRGKGLSMMGLLLFQMISPLVIMVPLYRYMNRLGLLDTHFAVVMVYIALGVPLATWLLK
SSVDGIPRSLDEAAMIDGCNRFSVFWRIILPLSAPGIASVFIITVIAGWSQFLVPFLLLTKNDLMPIGVGIFNFRGMQTD
SSIQLLAAACLIAVVPAIVAFLSLQRLILGAMTSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=220, Percent_Identity=35, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787571, Length=283, Percent_Identity=27.9151943462898, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1789860, Length=255, Percent_Identity=28.2352941176471, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30744; Mature: 30613

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SGRTGTRLGDAMSYLFMLVMFVFFAGPLTYLLSMAMRDKREIYRGAARYIPNNPTIDNF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ITVLNNSYFPIYLWNGLKLAALSGLGVLIVALPAAYAFSRFQFRGKGLSMMGLLLFQMIS
HHHHCCCCCEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PLVIMVPLYRYMNRLGLLDTHFAVVMVYIALGVPLATWLLKSSVDGIPRSLDEAAMIDGC
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
NRFSVFWRIILPLSAPGIASVFIITVIAGWSQFLVPFLLLTKNDLMPIGVGIFNFRGMQT
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCC
DSSIQLLAAACLIAVVPAIVAFLSLQRLILGAMTSGAVKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]