| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is fabG [H]
Identifier: 116248961
GI number: 116248961
Start: 309993
End: 310772
Strand: Reverse
Name: fabG [H]
Synonym: pRL120292
Alternate gene names: 116248961
Gene position: 310772-309993 (Counterclockwise)
Preceding gene: 116248962
Following gene: 116248959
Centisome position: 35.72
GC content: 61.41
Gene sequence:
>780_bases ATGGCCGACTTTCTCAACCTGAGAGGCAAACGGGCCCTCATTACGGCTGGAACCAAAGGTACTGGTGCCGCGACCGTCAG ACTGTTTCGGGAGCTCGGCGCGCAGGTGCTGACAGCCGCTCGGGCCTGTCCGGACAGCCTGTCGGAAGACCTGTTCGTCG AGGCGGACCTGACCACCGAAGGGGGATGTGCAATCGTCGCAGAGGCCACACGGCGGCGCCTTGGCGGCGTCGACGTCATC GTCCATATGCTGGGTGGCTCTTCAGCGGCCGGAGGTGGATTTTCTGCACTGTCGGAAGACGACTGGCATAAGGAGCTGTC GCTCAACCTTTTTCCAGCCGTTCGCCTGGATCGGCAACTGGTTCCGGACATGGTCGCTCAAGGAAACGGTGTGGTGGTGC ATGTGACATCCATCCAGAGAGTCCTGCCGCTTCCGGAATCGACGACGGCCTATGCTGCGGCGAAGGCAGCGCTTTCCACT TACAGCAAGGCGATGTCGAAGGAAGTTTCGCCCAAAGGTGTTCGTGTCGTTCGGGTGTCGCCAGGCTGGATCGAAACGGA AGCTTCGGTCCACCTTGCAGAGCGCCTGGCGAAGCAGGCCGGAACAGACCTCGAGGGGGGCAAAAAGATCATCATGGACG GGCTGGGCGGCATTCCGCTGGGGCGTCCGGCAAAGCCGGAAGAGGTCGCAAACCTGATTGCCTTCCTCGCCTCGGACCGG GCTGCGTCGATCACCGGTACCGAATATACAATCGATGGGGGGACAGTGCCAACAGCTTAG
Upstream 100 bases:
>100_bases TCCGGGCGAGGGTGAGCGGCCAGTTTCCCGGTAGCCCGGTGATGCTCACCCACGCCTTCACCATCAAGGACGACAGGATT GTCAGGCTGGAGATATTATA
Downstream 100 bases:
>100_bases GCGCCGACATACACGGCAAATCAGGCGGGTGCGTCCCAGCCGCCGATCTGGGAATAGATCGCGTTGCGGAGATGGCGGAC GTCGCGGTTCAGAGCGCCCA
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MADFLNLRGKRALITAGTKGTGAATVRLFRELGAQVLTAARACPDSLSEDLFVEADLTTEGGCAIVAEATRRRLGGVDVI VHMLGGSSAAGGGFSALSEDDWHKELSLNLFPAVRLDRQLVPDMVAQGNGVVVHVTSIQRVLPLPESTTAYAAAKAALST YSKAMSKEVSPKGVRVVRVSPGWIETEASVHLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDR AASITGTEYTIDGGTVPTA
Sequences:
>Translated_259_residues MADFLNLRGKRALITAGTKGTGAATVRLFRELGAQVLTAARACPDSLSEDLFVEADLTTEGGCAIVAEATRRRLGGVDVI VHMLGGSSAAGGGFSALSEDDWHKELSLNLFPAVRLDRQLVPDMVAQGNGVVVHVTSIQRVLPLPESTTAYAAAKAALST YSKAMSKEVSPKGVRVVRVSPGWIETEASVHLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDR AASITGTEYTIDGGTVPTA >Mature_258_residues ADFLNLRGKRALITAGTKGTGAATVRLFRELGAQVLTAARACPDSLSEDLFVEADLTTEGGCAIVAEATRRRLGGVDVIV HMLGGSSAAGGGFSALSEDDWHKELSLNLFPAVRLDRQLVPDMVAQGNGVVVHVTSIQRVLPLPESTTAYAAAKAALSTY SKAMSKEVSPKGVRVVRVSPGWIETEASVHLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRA ASITGTEYTIDGGTVPTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=263, Percent_Identity=30.4182509505703, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI7705925, Length=258, Percent_Identity=29.0697674418605, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI19923817, Length=264, Percent_Identity=25, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI66933014, Length=156, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI59889578, Length=236, Percent_Identity=30.0847457627119, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=27.0161290322581, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI15277342, Length=160, Percent_Identity=29.375, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI20149619, Length=201, Percent_Identity=27.8606965174129, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI126723750, Length=261, Percent_Identity=26.4367816091954, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=29.7297297297297, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1787335, Length=259, Percent_Identity=29.3436293436293, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1786812, Length=260, Percent_Identity=31.1538461538462, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87082160, Length=263, Percent_Identity=24.3346007604563, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789378, Length=263, Percent_Identity=25.8555133079848, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788459, Length=204, Percent_Identity=31.3725490196078, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI2367365, Length=251, Percent_Identity=27.0916334661355, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1790717, Length=274, Percent_Identity=25.5474452554745, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787905, Length=273, Percent_Identity=28.2051282051282, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI2367175, Length=263, Percent_Identity=27.7566539923954, Blast_Score=67, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17563726, Length=267, Percent_Identity=31.4606741573034, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=30.5970149253731, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=30.9701492537313, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=30.5970149253731, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI72000259, Length=272, Percent_Identity=27.5735294117647, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17562990, Length=272, Percent_Identity=30.8823529411765, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17560676, Length=264, Percent_Identity=29.9242424242424, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17562910, Length=275, Percent_Identity=31.6363636363636, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17560150, Length=275, Percent_Identity=29.8181818181818, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=28.3582089552239, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=27.1698113207547, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71994604, Length=227, Percent_Identity=28.6343612334802, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71994600, Length=258, Percent_Identity=27.5193798449612, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17551412, Length=268, Percent_Identity=27.6119402985075, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=28.4644194756554, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=28.6259541984733, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=28.4644194756554, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17531453, Length=271, Percent_Identity=29.520295202952, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=26.2548262548263, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538486, Length=277, Percent_Identity=27.0758122743682, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=26.5917602996255, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17555706, Length=259, Percent_Identity=24.7104247104247, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17508651, Length=260, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=24.7011952191235, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25147288, Length=260, Percent_Identity=26.5384615384615, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560220, Length=269, Percent_Identity=26.7657992565056, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI21357041, Length=261, Percent_Identity=29.8850574712644, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24644339, Length=261, Percent_Identity=29.8850574712644, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI23397609, Length=258, Percent_Identity=28.6821705426357, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI28571526, Length=261, Percent_Identity=29.5019157088123, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI21355319, Length=260, Percent_Identity=29.2307692307692, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24639444, Length=260, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21358495, Length=203, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24644337, Length=128, Percent_Identity=33.59375, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26948; Mature: 26817
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFLNLRGKRALITAGTKGTGAATVRLFRELGAQVLTAARACPDSLSEDLFVEADLTTE CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC GGCAIVAEATRRRLGGVDVIVHMLGGSSAAGGGFSALSEDDWHKELSLNLFPAVRLDRQL CCEEEEEHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCEECHHHHHHHHH VPDMVAQGNGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVS HHHHHHCCCCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC PGWIETEASVHLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDR CCEEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC AASITGTEYTIDGGTVPTA CCEECCCEEEECCCCCCCC >Mature Secondary Structure ADFLNLRGKRALITAGTKGTGAATVRLFRELGAQVLTAARACPDSLSEDLFVEADLTTE CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC GGCAIVAEATRRRLGGVDVIVHMLGGSSAAGGGFSALSEDDWHKELSLNLFPAVRLDRQL CCEEEEEHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCEECHHHHHHHHH VPDMVAQGNGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVS HHHHHHCCCCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC PGWIETEASVHLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDR CCEEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC AASITGTEYTIDGGTVPTA CCEECCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]