| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116248915
Identifier: 116248915
GI number: 116248915
Start: 256934
End: 257392
Strand: Reverse
Name: 116248915
Synonym: pRL120245
Alternate gene names: NA
Gene position: 257392-256934 (Counterclockwise)
Preceding gene: 116248916
Following gene: 116248914
Centisome position: 29.58
GC content: 59.04
Gene sequence:
>459_bases ATGATCGGCCCGAAATTATTGATCGAGCCGTCCGATCTTGCTTCACTCATGCGTGAGGTGCGCGGCAGCCATGAGTTGCT TCTGACAACAACCATCCTATCTGACAGTCACCGCCACGTCACTGAAATCGAGAAAACGGAGCTGCGATCCGCCTTGAGCA CGCGCGAGGAGACAATCATGAACGGCATTTCCAAAACCCTGAACGACATGACGCTCGTCGAACGCTCGAGCCTGCTCGAC ACCGTCGCCGACGCCTTGGAAGCAACGGCCGAAGAGGCGGAAGGTGAAGGCGACGCCCGCTTCGTCGCCAACTCCATCTG CGTCGCCAATACGATTCGCGGACTATCCGGGGACCTGACGCCACGCGATCTGCAGGCGGCCGAGTTGCTCCTCGAGCAGG GCATCATGCTCGTCCACCAGTTCTCGAACCGGGCGAAGACAAACGGAGTGATCCACTAG
Upstream 100 bases:
>100_bases CGGAGGTCGATCGCGCGGGGTGGTTTTCCCCGCCCGACGCAGCCATAAAGCTGTTGAAAGGGCAGCGACCGATGCTTGCC GACCTGCTGACGCATCTGGA
Downstream 100 bases:
>100_bases AACAGGATGATTTTAGGCCGGCTCGGCCTAAAATCTGAATCCTGTTCTGAATTAATTAGTTGGAGCATGATGTCGTTCGA AAACCGCTCACACTTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MIGPKLLIEPSDLASLMREVRGSHELLLTTTILSDSHRHVTEIEKTELRSALSTREETIMNGISKTLNDMTLVERSSLLD TVADALEATAEEAEGEGDARFVANSICVANTIRGLSGDLTPRDLQAAELLLEQGIMLVHQFSNRAKTNGVIH
Sequences:
>Translated_152_residues MIGPKLLIEPSDLASLMREVRGSHELLLTTTILSDSHRHVTEIEKTELRSALSTREETIMNGISKTLNDMTLVERSSLLD TVADALEATAEEAEGEGDARFVANSICVANTIRGLSGDLTPRDLQAAELLLEQGIMLVHQFSNRAKTNGVIH >Mature_152_residues MIGPKLLIEPSDLASLMREVRGSHELLLTTTILSDSHRHVTEIEKTELRSALSTREETIMNGISKTLNDMTLVERSSLLD TVADALEATAEEAEGEGDARFVANSICVANTIRGLSGDLTPRDLQAAELLLEQGIMLVHQFSNRAKTNGVIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16578; Mature: 16578
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGPKLLIEPSDLASLMREVRGSHELLLTTTILSDSHRHVTEIEKTELRSALSTREETIM CCCCCEEECHHHHHHHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH NGISKTLNDMTLVERSSLLDTVADALEATAEEAEGEGDARFVANSICVANTIRGLSGDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC PRDLQAAELLLEQGIMLVHQFSNRAKTNGVIH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIGPKLLIEPSDLASLMREVRGSHELLLTTTILSDSHRHVTEIEKTELRSALSTREETIM CCCCCEEECHHHHHHHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH NGISKTLNDMTLVERSSLLDTVADALEATAEEAEGEGDARFVANSICVANTIRGLSGDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC PRDLQAAELLLEQGIMLVHQFSNRAKTNGVIH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA