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The map label for this gene is 116248897

Identifier: 116248897

GI number: 116248897

Start: 234652

End: 235638

Strand: Reverse

Name: 116248897

Synonym: pRL120227

Alternate gene names: NA

Gene position: 235638-234652 (Counterclockwise)

Preceding gene: 116248898

Following gene: 116248896

Centisome position: 27.08

GC content: 64.34

Gene sequence:

>987_bases
ATGCACATTCTCATTATCGGGGCGGGAGGAATGATCGGCCGGAAGCTCGCCGCCACACTGGGGCGCAGCGGGTCACTCGG
CGGCGATACAATCACGCGCATGACGCTTGTGGATGTAACGCCTCCGCCGGTGCCCGCCGACGTCTTCGTGCCGGCGGAAG
CGCTGGCTGCCGATATTTCCGAAAGCGGCGCAGCGGAGGCCCTGGCGGCTCGCCGGGCCGACGTGATCTTCCATCTCGCC
GCGATCGTTTCCGGTGAAGCCGAGCGCAATTTCGACCTCGGCTACAAGGTCAATCTCGACGGCACCCGATTGCTGTTGGA
AGCGATCCGCCGGGAAGGAAGCCGCCAAGCCTATGTTCCCCGGTTCGTATTCTCCTCGTCGATCGCGGTCTATGGCTCGC
CGTTTCCCGATCCCATTCCCGATGATTATGTGCTCGCACCTCTCACCAGCTACGGAGTCCAGAAGGCGATCTCCGAGCTT
CTGCTTGCCGACTATTCGCGGCGCGGCTTTATCGACGGCGTCGGAATTCGGTTGCCGACCATCGTGATTCGGCCGGGTGC
GCCGAATGCCGCCGCATCGGGCTTCTTTTCCGGAATCCTGCGTGAACCGCTCGCAGGCCAGCGGGCCGTTCTTCCGGTCG
AAGAAACGGTCAAGCACTGGCTGGCAAGCCCGCGTTCCGCCATCAAGTTCCTGATCCATGCGGCTACGCTCGACACGGCC
GCGCTGGGTGTTCGGCGCACGCTCACCATGCCCGGCGTCGCCGCCACCGTTGCCGACCAGATTGCCGCCTTGCGCCGTGC
TGCCGGTCCCGAGGCGGCGGAGTTGATCGATCGTCGCCGCGATGAGGTCATTGAAGGGATCGTCGCCGGATGGCCGAAGT
CCTTTACGCCCGAACGCGCGACGCAACTGGGTTTCGTCGCCGAAACCACGGTGGACGAGCTGATCGAGGTCTATCTCGCC
GAAGACGCTCCGGGTGCGTCCGGATGA

Upstream 100 bases:

>100_bases
GGACCCGGATGCCGCATGCGCGGCCTTCGCAATCCACGAAACCCGTATTTATACGACGACCAAGTTACTCTTCTCGTAGT
TCGCAGGGAGGCGAAACACG

Downstream 100 bases:

>100_bases
GATTGAACCGGGCTAAAACCGCCCCATAGGAGGAGAGTACCGCCAGGGCACGCCCGCATATGCGGGATTGCAGCGGCAGA
AGGCCTTGAGAAGTTAAGGC

Product: putative 4-hydroxybutyrate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MHILIIGAGGMIGRKLAATLGRSGSLGGDTITRMTLVDVTPPPVPADVFVPAEALAADISESGAAEALAARRADVIFHLA
AIVSGEAERNFDLGYKVNLDGTRLLLEAIRREGSRQAYVPRFVFSSSIAVYGSPFPDPIPDDYVLAPLTSYGVQKAISEL
LLADYSRRGFIDGVGIRLPTIVIRPGAPNAAASGFFSGILREPLAGQRAVLPVEETVKHWLASPRSAIKFLIHAATLDTA
ALGVRRTLTMPGVAATVADQIAALRRAAGPEAAELIDRRRDEVIEGIVAGWPKSFTPERATQLGFVAETTVDELIEVYLA
EDAPGASG

Sequences:

>Translated_328_residues
MHILIIGAGGMIGRKLAATLGRSGSLGGDTITRMTLVDVTPPPVPADVFVPAEALAADISESGAAEALAARRADVIFHLA
AIVSGEAERNFDLGYKVNLDGTRLLLEAIRREGSRQAYVPRFVFSSSIAVYGSPFPDPIPDDYVLAPLTSYGVQKAISEL
LLADYSRRGFIDGVGIRLPTIVIRPGAPNAAASGFFSGILREPLAGQRAVLPVEETVKHWLASPRSAIKFLIHAATLDTA
ALGVRRTLTMPGVAATVADQIAALRRAAGPEAAELIDRRRDEVIEGIVAGWPKSFTPERATQLGFVAETTVDELIEVYLA
EDAPGASG
>Mature_328_residues
MHILIIGAGGMIGRKLAATLGRSGSLGGDTITRMTLVDVTPPPVPADVFVPAEALAADISESGAAEALAARRADVIFHLA
AIVSGEAERNFDLGYKVNLDGTRLLLEAIRREGSRQAYVPRFVFSSSIAVYGSPFPDPIPDDYVLAPLTSYGVQKAISEL
LLADYSRRGFIDGVGIRLPTIVIRPGAPNAAASGFFSGILREPLAGQRAVLPVEETVKHWLASPRSAIKFLIHAATLDTA
ALGVRRTLTMPGVAATVADQIAALRRAAGPEAAELIDRRRDEVIEGIVAGWPKSFTPERATQLGFVAETTVDELIEVYLA
EDAPGASG

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34630; Mature: 34630

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILIIGAGGMIGRKLAATLGRSGSLGGDTITRMTLVDVTPPPVPADVFVPAEALAADIS
CEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHH
ESGAAEALAARRADVIFHLAAIVSGEAERNFDLGYKVNLDGTRLLLEAIRREGSRQAYVP
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCC
RFVFSSSIAVYGSPFPDPIPDDYVLAPLTSYGVQKAISELLLADYSRRGFIDGVGIRLPT
HHHHHCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECE
IVIRPGAPNAAASGFFSGILREPLAGQRAVLPVEETVKHWLASPRSAIKFLIHAATLDTA
EEECCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
ALGVRRTLTMPGVAATVADQIAALRRAAGPEAAELIDRRRDEVIEGIVAGWPKSFTPERA
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
TQLGFVAETTVDELIEVYLAEDAPGASG
HHHCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHILIIGAGGMIGRKLAATLGRSGSLGGDTITRMTLVDVTPPPVPADVFVPAEALAADIS
CEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHH
ESGAAEALAARRADVIFHLAAIVSGEAERNFDLGYKVNLDGTRLLLEAIRREGSRQAYVP
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCC
RFVFSSSIAVYGSPFPDPIPDDYVLAPLTSYGVQKAISELLLADYSRRGFIDGVGIRLPT
HHHHHCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECE
IVIRPGAPNAAASGFFSGILREPLAGQRAVLPVEETVKHWLASPRSAIKFLIHAATLDTA
EEECCCCCCHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
ALGVRRTLTMPGVAATVADQIAALRRAAGPEAAELIDRRRDEVIEGIVAGWPKSFTPERA
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
TQLGFVAETTVDELIEVYLAEDAPGASG
HHHCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]