| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 116248818
GI number: 116248818
Start: 145005
End: 145745
Strand: Reverse
Name: fabG [H]
Synonym: pRL120144
Alternate gene names: 116248818
Gene position: 145745-145005 (Counterclockwise)
Preceding gene: 116248819
Following gene: 116248817
Centisome position: 16.75
GC content: 65.59
Gene sequence:
>741_bases GTGATGCCGATACCTTCAGCCATCGTCACGGGTGCAGGATCCGGCATCGGCCGCGCGATCGCAGCCCGGCTGTCGCAGGA CGGCTATGCCGTGCTCGTCAATGATCTCCATCTCGACCGTGCACAGGCGGTAGCCGACGAGATCGCGGTTGCCGGCGGGA AGGCCGTTGCGGTTGCCGGCGACGTCTCTTCCGAGACGGATACGGCGAACGTCTACGATGTCGCAGTTTCGGCCTTCGGC CATCCCCGGTTGCTCGTCAACTGTGCCGGCATCGTCCACCAGGCACTGTTCGAGAACCTCGAGGTCGCGGACTTCGACCG GATGTTCGCGATCCATGTGCGCGGCACCTTTCTGATGACCAAGCTGGCTTTGCCATCGATGCTCGCCGCCGGCGATGGCG TCATCATCAACGTCGCCTCACAGCTCGGCCAGATCGGCGGCATCGAACTCGTCCATTATGCCGGCGCCAAGGCGGCGATC ATCGGCATGACGAAATCGCTAGCCCGCGAGGTCTCGAACCGCGGCGTGCGCGTCAATGCCGTCGCTCCCGGGCCGATCAA CACGCCACTGGTGCGCGAACTCTCGCAGGAATGGCGCGTCCGCAAGGCCGCCGAGCTGCCGCTCGGCCGTTTCGGCGAGC CGGAAGAGGTTGCCGCCACCGTTTCGTTTCTCGCATCGCCCGCCGCCAGCCTGTTCGTCGGCCAGACGCTTGGCCCGAAC TCCGGCGACGTCATGCTCTAG
Upstream 100 bases:
>100_bases TGCTGACGACGATCTTCTCCTTCGCGCTGCTCGGCGTCTACGCCGTCCTGATGATGCTTTCCATACGCCGCGCCAAGCGA GTCGCGATCCAGGAGGAGGC
Downstream 100 bases:
>100_bases TCAGGAAAACAGAATGACCACGATCTCTTCGACACCCCGCATCGTACTGATCACCGGCGCCGGCATCGGTATCGGCAAGG CGACTGCCAAGGCATTCGCT
Product: putative 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase)
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MMPIPSAIVTGAGSGIGRAIAARLSQDGYAVLVNDLHLDRAQAVADEIAVAGGKAVAVAGDVSSETDTANVYDVAVSAFG HPRLLVNCAGIVHQALFENLEVADFDRMFAIHVRGTFLMTKLALPSMLAAGDGVIINVASQLGQIGGIELVHYAGAKAAI IGMTKSLAREVSNRGVRVNAVAPGPINTPLVRELSQEWRVRKAAELPLGRFGEPEEVAATVSFLASPAASLFVGQTLGPN SGDVML
Sequences:
>Translated_246_residues MMPIPSAIVTGAGSGIGRAIAARLSQDGYAVLVNDLHLDRAQAVADEIAVAGGKAVAVAGDVSSETDTANVYDVAVSAFG HPRLLVNCAGIVHQALFENLEVADFDRMFAIHVRGTFLMTKLALPSMLAAGDGVIINVASQLGQIGGIELVHYAGAKAAI IGMTKSLAREVSNRGVRVNAVAPGPINTPLVRELSQEWRVRKAAELPLGRFGEPEEVAATVSFLASPAASLFVGQTLGPN SGDVML >Mature_246_residues MMPIPSAIVTGAGSGIGRAIAARLSQDGYAVLVNDLHLDRAQAVADEIAVAGGKAVAVAGDVSSETDTANVYDVAVSAFG HPRLLVNCAGIVHQALFENLEVADFDRMFAIHVRGTFLMTKLALPSMLAAGDGVIINVASQLGQIGGIELVHYAGAKAAI IGMTKSLAREVSNRGVRVNAVAPGPINTPLVRELSQEWRVRKAAELPLGRFGEPEEVAATVSFLASPAASLFVGQTLGPN SGDVML
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=248, Percent_Identity=34.2741935483871, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI40254992, Length=216, Percent_Identity=34.2592592592593, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI19923817, Length=246, Percent_Identity=30.8943089430894, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI32483357, Length=241, Percent_Identity=34.4398340248963, Blast_Score=104, Evalue=6e-23, Organism=Homo sapiens, GI10190704, Length=235, Percent_Identity=33.6170212765957, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI4758504, Length=229, Percent_Identity=32.7510917030568, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI59889578, Length=183, Percent_Identity=37.7049180327869, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI66933014, Length=158, Percent_Identity=36.0759493670886, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI4504505, Length=185, Percent_Identity=35.1351351351351, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI5031737, Length=240, Percent_Identity=32.0833333333333, Blast_Score=87, Evalue=9e-18, Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=31.0880829015544, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI126723750, Length=244, Percent_Identity=31.1475409836066, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI83715985, Length=229, Percent_Identity=30.5676855895196, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI7705925, Length=233, Percent_Identity=29.6137339055794, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI142976729, Length=213, Percent_Identity=27.2300469483568, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI210032110, Length=203, Percent_Identity=26.6009852216749, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI31542939, Length=199, Percent_Identity=30.1507537688442, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI209862901, Length=195, Percent_Identity=29.7435897435897, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI19923983, Length=195, Percent_Identity=29.7435897435897, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI109715829, Length=236, Percent_Identity=26.6949152542373, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503301, Length=228, Percent_Identity=27.1929824561404, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI7705855, Length=193, Percent_Identity=27.979274611399, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI33667109, Length=188, Percent_Identity=31.9148936170213, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI7706318, Length=188, Percent_Identity=28.7234042553192, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI40807363, Length=185, Percent_Identity=26.4864864864865, Blast_Score=64, Evalue=8e-11, Organism=Escherichia coli, GI1787335, Length=240, Percent_Identity=37.0833333333333, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI1787905, Length=240, Percent_Identity=35.4166666666667, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI2367175, Length=238, Percent_Identity=39.9159663865546, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI87082100, Length=240, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1789208, Length=241, Percent_Identity=28.6307053941909, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1788459, Length=234, Percent_Identity=32.0512820512821, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1789378, Length=243, Percent_Identity=33.7448559670782, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1789057, Length=255, Percent_Identity=29.0196078431373, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=25, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1786812, Length=233, Percent_Identity=30.9012875536481, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87082160, Length=234, Percent_Identity=27.7777777777778, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI2367365, Length=232, Percent_Identity=31.4655172413793, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786701, Length=194, Percent_Identity=26.2886597938144, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17555706, Length=238, Percent_Identity=36.1344537815126, Blast_Score=137, Evalue=7e-33, Organism=Caenorhabditis elegans, GI25147288, Length=233, Percent_Identity=35.1931330472103, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI17561402, Length=239, Percent_Identity=33.4728033472803, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=32.6612903225806, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=30.9236947791165, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17560676, Length=243, Percent_Identity=29.6296296296296, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17568967, Length=186, Percent_Identity=36.0215053763441, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=30.2325581395349, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=28.2442748091603, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17531453, Length=263, Percent_Identity=29.6577946768061, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17544670, Length=250, Percent_Identity=27.2, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=28.2442748091603, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17564282, Length=184, Percent_Identity=32.0652173913043, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=29.7297297297297, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17536025, Length=236, Percent_Identity=33.0508474576271, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17538182, Length=231, Percent_Identity=32.034632034632, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=28.1954887218045, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17559104, Length=244, Percent_Identity=26.6393442622951, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17562904, Length=255, Percent_Identity=27.0588235294118, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=27.906976744186, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=29.7071129707113, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17536651, Length=241, Percent_Identity=29.8755186721992, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17561272, Length=226, Percent_Identity=30.5309734513274, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17508651, Length=245, Percent_Identity=28.9795918367347, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193203117, Length=195, Percent_Identity=28.2051282051282, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=28.7937743190661, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI193203115, Length=195, Percent_Identity=28.2051282051282, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17508895, Length=186, Percent_Identity=26.8817204301075, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=28.4046692607004, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71982365, Length=188, Percent_Identity=30.3191489361702, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=28.1368821292776, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=27.2030651340996, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17565030, Length=259, Percent_Identity=29.3436293436293, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=27.9527559055118, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17538486, Length=260, Percent_Identity=27.6923076923077, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17551412, Length=252, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17558628, Length=188, Percent_Identity=29.2553191489362, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17555612, Length=212, Percent_Identity=29.7169811320755, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=185, Percent_Identity=31.8918918918919, Blast_Score=99, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6320089, Length=190, Percent_Identity=25.7894736842105, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=179, Percent_Identity=29.608938547486, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24639444, Length=231, Percent_Identity=34.6320346320346, Blast_Score=137, Evalue=8e-33, Organism=Drosophila melanogaster, GI17737361, Length=229, Percent_Identity=36.2445414847162, Blast_Score=124, Evalue=6e-29, Organism=Drosophila melanogaster, GI21357041, Length=242, Percent_Identity=37.1900826446281, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI21355319, Length=235, Percent_Identity=31.9148936170213, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24644339, Length=237, Percent_Identity=31.2236286919831, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI23397609, Length=233, Percent_Identity=34.7639484978541, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI28571526, Length=242, Percent_Identity=32.6446280991736, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI18859837, Length=186, Percent_Identity=36.0215053763441, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24644337, Length=202, Percent_Identity=35.6435643564356, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI21356301, Length=191, Percent_Identity=30.8900523560209, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24640492, Length=190, Percent_Identity=27.3684210526316, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI21357673, Length=185, Percent_Identity=28.6486486486486, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24643142, Length=238, Percent_Identity=29.8319327731092, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24640442, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25435; Mature: 25435
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPIPSAIVTGAGSGIGRAIAARLSQDGYAVLVNDLHLDRAQAVADEIAVAGGKAVAVAG CCCCCCHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEC DVSSETDTANVYDVAVSAFGHPRLLVNCAGIVHQALFENLEVADFDRMFAIHVRGTFLMT CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHH KLALPSMLAAGDGVIINVASQLGQIGGIELVHYAGAKAAIIGMTKSLAREVSNRGVRVNA HHHHHHHHHCCCCEEEEEHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCEEEEE VAPGPINTPLVRELSQEWRVRKAAELPLGRFGEPEEVAATVSFLASPAASLFVGQTLGPN ECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCC SGDVML CCCCCC >Mature Secondary Structure MMPIPSAIVTGAGSGIGRAIAARLSQDGYAVLVNDLHLDRAQAVADEIAVAGGKAVAVAG CCCCCCHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEC DVSSETDTANVYDVAVSAFGHPRLLVNCAGIVHQALFENLEVADFDRMFAIHVRGTFLMT CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHH KLALPSMLAAGDGVIINVASQLGQIGGIELVHYAGAKAAIIGMTKSLAREVSNRGVRVNA HHHHHHHHHCCCCEEEEEHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCEEEEE VAPGPINTPLVRELSQEWRVRKAAELPLGRFGEPEEVAATVSFLASPAASLFVGQTLGPN ECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCC SGDVML CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]