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The map label for this gene is stbC

Identifier: 116248808

GI number: 116248808

Start: 135257

End: 135520

Strand: Reverse

Name: stbC

Synonym: pRL120134

Alternate gene names: NA

Gene position: 135520-135257 (Counterclockwise)

Preceding gene: 116248809

Following gene: 116248807

Centisome position: 15.58

GC content: 56.82

Gene sequence:

>264_bases
TTGACATCAATGCCGGCGGTCACCATTCGCAATCTTTCTGACGAAACACATCGCGCCCTACGGGTGCGCGCAGCTCATCA
TGGCCGAAGCACAGAGGCCGAAATCCGTGACATTATCGAGGCCGCCGTGCGTCCATCTGAACGCGTGAAGCTCGGCTCCT
TACTTGCGGCCATCGGTCGTGACGCTGAGCTCTCCAACAGCGACGTTGAAGCCTTGCAGCAAAATCGCAATAAGGCGCCT
GCTGAACCCATGACTTTCGAATGA

Upstream 100 bases:

>100_bases
TCGGTGCCGGCCCTCTACTCTGCCCAGCGTCGGTTGAGCGCCTGGCAAGTGTAACCGGCCAACCCGCCGATTGATGTCGC
ACTGGTGAGGTGGAGGAAAA

Downstream 100 bases:

>100_bases
TCCTGTTGGACACCAACGTGATATCGGAGCCGTGGAAACCGATTCCTGACGGAGCAGTGGTCGCTTGGTTGGACGCCCAA
GCCATCGAAACTCTCTTCGT

Product: putative plasmid stability protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTSMPAVTIRNLSDETHRALRVRAAHHGRSTEAEIRDIIEAAVRPSERVKLGSLLAAIGRDAELSNSDVEALQQNRNKAP
AEPMTFE

Sequences:

>Translated_87_residues
MTSMPAVTIRNLSDETHRALRVRAAHHGRSTEAEIRDIIEAAVRPSERVKLGSLLAAIGRDAELSNSDVEALQQNRNKAP
AEPMTFE
>Mature_86_residues
TSMPAVTIRNLSDETHRALRVRAAHHGRSTEAEIRDIIEAAVRPSERVKLGSLLAAIGRDAELSNSDVEALQQNRNKAPA
EPMTFE

Specific function: Involved in plasmid stability (Potential) [H]

COG id: COG4691

COG function: function code R; Plasmid stability protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To P.syringae pv tomato plasmid stability protein stbC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR010985 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9576; Mature: 9445

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSMPAVTIRNLSDETHRALRVRAAHHGRSTEAEIRDIIEAAVRPSERVKLGSLLAAIGR
CCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
DAELSNSDVEALQQNRNKAPAEPMTFE
CCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TSMPAVTIRNLSDETHRALRVRAAHHGRSTEAEIRDIIEAAVRPSERVKLGSLLAAIGR
CCCCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
DAELSNSDVEALQQNRNKAPAEPMTFE
CCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]