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The map label for this gene is dppC [H]

Identifier: 116248803

GI number: 116248803

Start: 129580

End: 130455

Strand: Reverse

Name: dppC [H]

Synonym: pRL120129

Alternate gene names: 116248803

Gene position: 130455-129580 (Counterclockwise)

Preceding gene: 116248804

Following gene: 116248802

Centisome position: 14.99

GC content: 59.47

Gene sequence:

>876_bases
ATGGCTGTTCAAGACAACATCATCGGAGCAGTCGCCGCACCGCCAAAGCGTGCTGCAAGGCCCAACTGGATGCGCATCTT
TCATTCGCGCACGGCCGTCGTCGGGCTTTGCCTGGTTCTCTTCTGGGTACTTGCGGCGCTTCTCGCGCCGATCCTGCCGC
TGCCATCGCCAACAGATTCCGATGTCCTGGCGATGAGCGATCCCTATCCGTCAGCTGCCCATTGGCTGGGAACCGATATT
CTCGGACGTGATATGCTGTCGCGGTTGATCTTTGGCGCGCGCACCGTGCTTTCCGTTGCGCCGCTTTCAGTGGCGGTTGC
CATGATCGTTGGCATCACCATGGGGATGATTTCCGGCTATTATGGCGGCTGGATCGATGTGCTGATCAGCCGCGTCTCGG
ATATCATCCTGGCCTTTCCGGTTCTCGTTATTTACGTGATCCTGATCGCCAATATCGGACCGTCGGTTCTGAACATCGTC
ATTGCGACGATGATCGCCTCGGCGCCGGGTATCGGCCGCATAACGCGCGGCCTGGTGCTGGGTCTGAAGCAGCAGGAATA
TGTCGCGGCGGCAAAGCTGCGTGCGGAAAGCACGCTCTACATCATGATCGTCGAACTGCTGCCCAACTGCCGCAGCCTGC
TGATCGTCGATGCCTGTCTGCGGATCGGCTACACGATCATCACCATTGGCATCCTCGGTTTCCTCGGCCTCGGTCTGCCG
CCACCGAACCCGGACTGGGGTGGCATGGTCAAGGAGAGCGTGACTGTTCTGAATGTGTGGCCGCACATGTCGCTGATCCC
CTCATTCGCGCTCGTCAGTCTGGTTCTCGGCTTCAACCTGCTGGCCGATGGTATGCGGGAGGCATGGAAGCCATGA

Upstream 100 bases:

>100_bases
AGCCGCCACGCTGATCACCGTCGCTATTGCCGTTGTTACGCAGCTGCTTGGCGACCTTGGCTACATGCTGCTCGATCCAC
GCATCCGGGTGAGGTAAATC

Downstream 100 bases:

>100_bases
ACATCATCGCGTCCAACCTTCAAGGAGCGGCCATGTCCATCACGCCATCGATCGATCGTGAACCCGTTCTCGACATCGAA
AACCTGCGCATCGAGTTTCG

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MAVQDNIIGAVAAPPKRAARPNWMRIFHSRTAVVGLCLVLFWVLAALLAPILPLPSPTDSDVLAMSDPYPSAAHWLGTDI
LGRDMLSRLIFGARTVLSVAPLSVAVAMIVGITMGMISGYYGGWIDVLISRVSDIILAFPVLVIYVILIANIGPSVLNIV
IATMIASAPGIGRITRGLVLGLKQQEYVAAAKLRAESTLYIMIVELLPNCRSLLIVDACLRIGYTIITIGILGFLGLGLP
PPNPDWGGMVKESVTVLNVWPHMSLIPSFALVSLVLGFNLLADGMREAWKP

Sequences:

>Translated_291_residues
MAVQDNIIGAVAAPPKRAARPNWMRIFHSRTAVVGLCLVLFWVLAALLAPILPLPSPTDSDVLAMSDPYPSAAHWLGTDI
LGRDMLSRLIFGARTVLSVAPLSVAVAMIVGITMGMISGYYGGWIDVLISRVSDIILAFPVLVIYVILIANIGPSVLNIV
IATMIASAPGIGRITRGLVLGLKQQEYVAAAKLRAESTLYIMIVELLPNCRSLLIVDACLRIGYTIITIGILGFLGLGLP
PPNPDWGGMVKESVTVLNVWPHMSLIPSFALVSLVLGFNLLADGMREAWKP
>Mature_290_residues
AVQDNIIGAVAAPPKRAARPNWMRIFHSRTAVVGLCLVLFWVLAALLAPILPLPSPTDSDVLAMSDPYPSAAHWLGTDIL
GRDMLSRLIFGARTVLSVAPLSVAVAMIVGITMGMISGYYGGWIDVLISRVSDIILAFPVLVIYVILIANIGPSVLNIVI
ATMIASAPGIGRITRGLVLGLKQQEYVAAAKLRAESTLYIMIVELLPNCRSLLIVDACLRIGYTIITIGILGFLGLGLPP
PNPDWGGMVKESVTVLNVWPHMSLIPSFALVSLVLGFNLLADGMREAWKP

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=270, Percent_Identity=35.1851851851852, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1787760, Length=286, Percent_Identity=35.6643356643357, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1789964, Length=221, Percent_Identity=40.2714932126697, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1787498, Length=268, Percent_Identity=34.3283582089552, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1787549, Length=284, Percent_Identity=31.3380281690141, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1789889, Length=222, Percent_Identity=31.0810810810811, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1788505, Length=240, Percent_Identity=25.4166666666667, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31156; Mature: 31025

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQDNIIGAVAAPPKRAARPNWMRIFHSRTAVVGLCLVLFWVLAALLAPILPLPSPTDS
CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DVLAMSDPYPSAAHWLGTDILGRDMLSRLIFGARTVLSVAPLSVAVAMIVGITMGMISGY
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGGWIDVLISRVSDIILAFPVLVIYVILIANIGPSVLNIVIATMIASAPGIGRITRGLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
GLKQQEYVAAAKLRAESTLYIMIVELLPNCRSLLIVDACLRIGYTIITIGILGFLGLGLP
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PPNPDWGGMVKESVTVLNVWPHMSLIPSFALVSLVLGFNLLADGMREAWKP
CCCCCCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVQDNIIGAVAAPPKRAARPNWMRIFHSRTAVVGLCLVLFWVLAALLAPILPLPSPTDS
CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DVLAMSDPYPSAAHWLGTDILGRDMLSRLIFGARTVLSVAPLSVAVAMIVGITMGMISGY
CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGGWIDVLISRVSDIILAFPVLVIYVILIANIGPSVLNIVIATMIASAPGIGRITRGLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
GLKQQEYVAAAKLRAESTLYIMIVELLPNCRSLLIVDACLRIGYTIITIGILGFLGLGLP
CCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PPNPDWGGMVKESVTVLNVWPHMSLIPSFALVSLVLGFNLLADGMREAWKP
CCCCCCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]