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The map label for this gene is yurN [H]

Identifier: 116248786

GI number: 116248786

Start: 107438

End: 108397

Strand: Direct

Name: yurN [H]

Synonym: pRL120112

Alternate gene names: 116248786

Gene position: 107438-108397 (Clockwise)

Preceding gene: 116248785

Following gene: 116248787

Centisome position: 12.35

GC content: 61.56

Gene sequence:

>960_bases
ATGGCCGGCACCTCCGCTTCCCCCGCGCGGGAAGCGGCGGGCGTGATGCAGGTTTCCCCGCTAGCGGTCAGCATTGAAGG
TCGCCGGCGTCTGCTCAGGGACACGCCCGCCGCATTGATCCTGATCGCACCCGTCATCGTGCTCTTTGCCCTCGCCGTGG
TCTATCCGCTGGTGGAGACTATCCGCTTGAGCTTCTGGGACATACAGGGCCTGCGGAAGCCTTCCTTCATCGGCTTCGGC
AATTATGTGCGGCTGTTTTCGGACGCCGCCTTTCGCAGCACGCTGCTAACGACCCTGATATTCACGATCGGGACGACGGT
GATTTCTGTCTCGATTGGCTGGGCTCTGGCAATGACGTGCGCGTTCGCGCCACGACAGACGCTGCCGTTCCGCGTGATGA
TCTTTGCCGCCTTCGGTATTTCGGAGGCAGTTTCGGGCTACATGTGGATCGGCATCTACAGGGCCGACGCCGGCGGCCTG
CTCAATTCGCTGATTCAGCTTTTCGGGTTTTCCGGCTTCTCGCATGCTTGGCTCGGTGACGCCAATACGGCACTGTGGGC
GCTCATCATAGCCGCATCGTGGAGCGGCGTAGGCTTGCCCCTGATGCTGATCTTCGCCGCCATCCAGGCAATCCCGAAAT
CCGTGCTCGAAGCAGCCTATATGGACGGCGCCAAGCCGCTCTCGACCATGCGCCATATCATGATGCCGCTATCGATGCCC
GGCGTGCGTGTCGCGGTTTTCATCAATCTTCTGGGTGCCCTGCGCGCCTTCGACATCATCTACATCCTGACGGGCGGCGG
ACCGGTGCGCTCAACCGAGACGGTCGGCTATTTCATGTACCGGGAATCCATGACCCAGTTCAAACTGGGCTATGGCGCCG
CCGCGACCGTCATCCTGCTGCTGGCCGTGCTCATCGTCTCGATCCCCGCCATCATCCAGCGAACGGCAGGTGCGAAATGA

Upstream 100 bases:

>100_bases
AATATCGCGTGCAGCTGCAGAAATTTCTGCAGGATCCCTCGGATGCTAATATCGATAGCGTCCTTGCGGCAATCGAAACC
AAGGCCCAGGGTTCCTACTG

Downstream 100 bases:

>100_bases
TCGGCAAGGCTCCCCGCTGGATTGTCATATTCGTCGGCATCATCGCCTGCATCTGGGTCATCCCAATCGCCGGTATCGTT
GTTACATCCCTGCGTCCTCC

Product: putative transmembrane component of transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAGTSASPAREAAGVMQVSPLAVSIEGRRRLLRDTPAALILIAPVIVLFALAVVYPLVETIRLSFWDIQGLRKPSFIGFG
NYVRLFSDAAFRSTLLTTLIFTIGTTVISVSIGWALAMTCAFAPRQTLPFRVMIFAAFGISEAVSGYMWIGIYRADAGGL
LNSLIQLFGFSGFSHAWLGDANTALWALIIAASWSGVGLPLMLIFAAIQAIPKSVLEAAYMDGAKPLSTMRHIMMPLSMP
GVRVAVFINLLGALRAFDIIYILTGGGPVRSTETVGYFMYRESMTQFKLGYGAAATVILLLAVLIVSIPAIIQRTAGAK

Sequences:

>Translated_319_residues
MAGTSASPAREAAGVMQVSPLAVSIEGRRRLLRDTPAALILIAPVIVLFALAVVYPLVETIRLSFWDIQGLRKPSFIGFG
NYVRLFSDAAFRSTLLTTLIFTIGTTVISVSIGWALAMTCAFAPRQTLPFRVMIFAAFGISEAVSGYMWIGIYRADAGGL
LNSLIQLFGFSGFSHAWLGDANTALWALIIAASWSGVGLPLMLIFAAIQAIPKSVLEAAYMDGAKPLSTMRHIMMPLSMP
GVRVAVFINLLGALRAFDIIYILTGGGPVRSTETVGYFMYRESMTQFKLGYGAAATVILLLAVLIVSIPAIIQRTAGAK
>Mature_318_residues
AGTSASPAREAAGVMQVSPLAVSIEGRRRLLRDTPAALILIAPVIVLFALAVVYPLVETIRLSFWDIQGLRKPSFIGFGN
YVRLFSDAAFRSTLLTTLIFTIGTTVISVSIGWALAMTCAFAPRQTLPFRVMIFAAFGISEAVSGYMWIGIYRADAGGLL
NSLIQLFGFSGFSHAWLGDANTALWALIIAASWSGVGLPLMLIFAAIQAIPKSVLEAAYMDGAKPLSTMRHIMMPLSMPG
VRVAVFINLLGALRAFDIIYILTGGGPVRSTETVGYFMYRESMTQFKLGYGAAATVILLLAVLIVSIPAIIQRTAGAK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=286, Percent_Identity=26.5734265734266, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1790465, Length=252, Percent_Identity=29.3650793650794, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787570, Length=264, Percent_Identity=25.7575757575758, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34192; Mature: 34061

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTSASPAREAAGVMQVSPLAVSIEGRRRLLRDTPAALILIAPVIVLFALAVVYPLVET
CCCCCCCCHHHHCCCEEECCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRLSFWDIQGLRKPSFIGFGNYVRLFSDAAFRSTLLTTLIFTIGTTVISVSIGWALAMTC
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAPRQTLPFRVMIFAAFGISEAVSGYMWIGIYRADAGGLLNSLIQLFGFSGFSHAWLGD
HCCCCCCCCHHEEHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC
ANTALWALIIAASWSGVGLPLMLIFAAIQAIPKSVLEAAYMDGAKPLSTMRHIMMPLSMP
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
GVRVAVFINLLGALRAFDIIYILTGGGPVRSTETVGYFMYRESMTQFKLGYGAAATVILL
CHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LAVLIVSIPAIIQRTAGAK
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AGTSASPAREAAGVMQVSPLAVSIEGRRRLLRDTPAALILIAPVIVLFALAVVYPLVET
CCCCCCCHHHHCCCEEECCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IRLSFWDIQGLRKPSFIGFGNYVRLFSDAAFRSTLLTTLIFTIGTTVISVSIGWALAMTC
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAPRQTLPFRVMIFAAFGISEAVSGYMWIGIYRADAGGLLNSLIQLFGFSGFSHAWLGD
HCCCCCCCCHHEEHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC
ANTALWALIIAASWSGVGLPLMLIFAAIQAIPKSVLEAAYMDGAKPLSTMRHIMMPLSMP
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
GVRVAVFINLLGALRAFDIIYILTGGGPVRSTETVGYFMYRESMTQFKLGYGAAATVILL
CHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LAVLIVSIPAIIQRTAGAK
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]