| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is kch [C]
Identifier: 116248764
GI number: 116248764
Start: 84264
End: 85319
Strand: Direct
Name: kch [C]
Synonym: pRL120088
Alternate gene names: 116248764
Gene position: 84264-85319 (Clockwise)
Preceding gene: 116248757
Following gene: 116248765
Centisome position: 9.69
GC content: 60.04
Gene sequence:
>1056_bases TTGCCATTTATCGCTTCATTGCTGCGGCGTGTATATCTCTCGCTCAGCGAATTGGCCTGGTCAGCCCTTTTTGTTATCCT CGTGATCCACCTGGTCGCTTCTTACCTGCTCTTCCTGTTGGCCGGCGAAGGCGATCTCGTCGGCAATCCGGTCGACTTTC TTTATTACTACATGGTGACGGCAACGACTGTCGGCTATGGCGATCTTTCTCCAAAATCGGGGCCTGGCCGATTAATTGCC GTCCTGTTCGTTCTTCCCGGCGGCATTGCCATCTTCACCGCTGTTCTTGGCAAGTTGTTGACAACTATCGGTACGATCTG GAGGAACCGCATGCGTGGATTGGGTGATTACAGCGAGCGCGCCGGCCATATCATTGTCCTGGGCTGGCAAGAGGGGCAGA CATACCAGACGCTGCGGCTGCTGCATGCCGAACGACAGGCCAACGAACCGATGAGTGTTCTGGTTGCCAAGGACCTGCCG GAAAATCCCGCCAGCAATTACGCCGACTATATCAGAACCGAGCGGCTTGGTGATGCCGACGCTCTGGTGCGGGCCGGAGT GGCGAAGGCGCGCGCGATCATCGCGCGCGGCGCAAATGACGACGAGACGCTGGCCGCGGTGCTGATTGCCGAAGACCATG CGCCTAATGCCCATATCGTGGCCTATTTCGCCGACGACCGCACGGCACAGATGGTCAAACAACGCCGGCCGCGCGTCGAG GCTGTGGGCTCGCTCGCCGAGGAGCTGCTGTCGCGTTCCGCCCGTGATCCGGGCTCTTCGGAAATCGCCGCACGGCTGCT GTCGGCCGCCTCCACCGACACGGCCTTTTCCCTGCCGGTACCGCCTCTGCAAACGCCGCTGCTCTATGGAGACGTGTTTT TAAGCCTCAAGCGTCAGCACAATGTGACGCTGGTGGGCATGCTGAGCCAGGGCGTGACCGACCTCAATTGCGGAGACGAG GCGCCGCTTCGGGGCGGCGAGACTCTTTACTACATCAGCGGAATGCGGCTAGATCCCGCTGCCATCGCTTGGGCTCGAAT GGGAGACGTATCATGA
Upstream 100 bases:
>100_bases TTGGAACGTCAAAATATTTGGGTAATCGGTTTGCAACTTAAAGATCTGGTGCGCTAAATAAATTTCGCTAGGGTACGCGT TGGGAACGGGGGCGAATCGC
Downstream 100 bases:
>100_bases TCGGCTGGTTCGGCAGAGACAAGAACGAAAGGCCTTTACCCAAAGAACATGGCCCGTTGAGCGCCGCCATCGGCGGGGCG TTGGAGATCGATTTCCTCTC
Product: putative transmembrane cation transporter
Products: K (I) [Cytoplasm] [C]
Alternate protein names: Ion Transport 2 Domain-Containing Protein; Potassium Channel Related Protein; Ion Transport 2 Domain Protein; Calcium-Activated Potassium Channel; Potassium Channel-Like Protein; Voltage-Gated Ion Channel Superfamily Protein; Cation Transporter Protein; Ion Channel Protein; Ion Channel Membrane Protein; Resembles Potassium Channels; TrkA Domain-Containing Protein; Transmembrane Cation Transporter; TrkA-N Domain Protein
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MPFIASLLRRVYLSLSELAWSALFVILVIHLVASYLLFLLAGEGDLVGNPVDFLYYYMVTATTVGYGDLSPKSGPGRLIA VLFVLPGGIAIFTAVLGKLLTTIGTIWRNRMRGLGDYSERAGHIIVLGWQEGQTYQTLRLLHAERQANEPMSVLVAKDLP ENPASNYADYIRTERLGDADALVRAGVAKARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFADDRTAQMVKQRRPRVE AVGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGDVFLSLKRQHNVTLVGMLSQGVTDLNCGDE APLRGGETLYYISGMRLDPAAIAWARMGDVS
Sequences:
>Translated_351_residues MPFIASLLRRVYLSLSELAWSALFVILVIHLVASYLLFLLAGEGDLVGNPVDFLYYYMVTATTVGYGDLSPKSGPGRLIA VLFVLPGGIAIFTAVLGKLLTTIGTIWRNRMRGLGDYSERAGHIIVLGWQEGQTYQTLRLLHAERQANEPMSVLVAKDLP ENPASNYADYIRTERLGDADALVRAGVAKARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFADDRTAQMVKQRRPRVE AVGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGDVFLSLKRQHNVTLVGMLSQGVTDLNCGDE APLRGGETLYYISGMRLDPAAIAWARMGDVS >Mature_350_residues PFIASLLRRVYLSLSELAWSALFVILVIHLVASYLLFLLAGEGDLVGNPVDFLYYYMVTATTVGYGDLSPKSGPGRLIAV LFVLPGGIAIFTAVLGKLLTTIGTIWRNRMRGLGDYSERAGHIIVLGWQEGQTYQTLRLLHAERQANEPMSVLVAKDLPE NPASNYADYIRTERLGDADALVRAGVAKARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFADDRTAQMVKQRRPRVEA VGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGDVFLSLKRQHNVTLVGMLSQGVTDLNCGDEA PLRGGETLYYISGMRLDPAAIAWARMGDVS
Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787503, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37996; Mature: 37865
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFIASLLRRVYLSLSELAWSALFVILVIHLVASYLLFLLAGEGDLVGNPVDFLYYYMVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ATTVGYGDLSPKSGPGRLIAVLFVLPGGIAIFTAVLGKLLTTIGTIWRNRMRGLGDYSER HHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC AGHIIVLGWQEGQTYQTLRLLHAERQANEPMSVLVAKDLPENPASNYADYIRTERLGDAD CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHH ALVRAGVAKARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFADDRTAQMVKQRRPRVE HHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHCCHHH AVGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGDVFLSLKRQH HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCC NVTLVGMLSQGVTDLNCGDEAPLRGGETLYYISGMRLDPAAIAWARMGDVS CEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEECCEECHHHHHHHHHCCCC >Mature Secondary Structure PFIASLLRRVYLSLSELAWSALFVILVIHLVASYLLFLLAGEGDLVGNPVDFLYYYMVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH ATTVGYGDLSPKSGPGRLIAVLFVLPGGIAIFTAVLGKLLTTIGTIWRNRMRGLGDYSER HHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC AGHIIVLGWQEGQTYQTLRLLHAERQANEPMSVLVAKDLPENPASNYADYIRTERLGDAD CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHH ALVRAGVAKARAIIARGANDDETLAAVLIAEDHAPNAHIVAYFADDRTAQMVKQRRPRVE HHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHCCHHH AVGSLAEELLSRSARDPGSSEIAARLLSAASTDTAFSLPVPPLQTPLLYGDVFLSLKRQH HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCC NVTLVGMLSQGVTDLNCGDEAPLRGGETLYYISGMRLDPAAIAWARMGDVS CEEEEEEHHCCCCCCCCCCCCCCCCCCEEEEEECCEECHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA