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The map label for this gene is yjfJ [H]

Identifier: 116248762

GI number: 116248762

Start: 82983

End: 83717

Strand: Reverse

Name: yjfJ [H]

Synonym: pRL120086

Alternate gene names: 116248762

Gene position: 83717-82983 (Counterclockwise)

Preceding gene: 116248763

Following gene: 116248761

Centisome position: 9.62

GC content: 62.18

Gene sequence:

>735_bases
GTGAGCACCTGGGGCAAGATTTTCACCGCCATTCGCGGCGGCATTAACGAGGTAGCGGAAGCGGCCGCCGACAGTCAGTC
CATGCGTGTCCTTGATCAAGAAATCCGCGATGCTGAACAGTCGTTGCGCGGGGCGCGATCCGATCTGGCCGGCATCATGG
CGTCCAACAAGAGCGTCATGCGCCGACTTGAAGAAAACCGCGCCAAGGAGACCAAGGATACCGACAGCGCTCGCGCTGCG
ATCTCCGCGGGCCGCACGGATCTCGCTCAGGGTCTCGCTCAGCGCATTGCCGGTACCCGAGCCGAAGTGCAGCGCGACCA
GGAAGAGCTCGACCGGCTGCTGCCCCGCCAGCAGCAAATGCTGCGCACGATCCAGGAGACCGAAGCGCGCATTGCTCAGA
TGAAGCGTGAGGTGGAGAATGTCAAAGCCAATGAGTCGCTGCTGCGCGCTCAGTCGGCGATCGCCCATAGCCAGTCGGGC
ATCAATACCCGCCTCGGTAGCGCCGTCGAAAGTCTCGAGCGTATCAAAAAACGCCAGGAAATCACTGCCGGCCGCATCGA
AGCCGGTGCTGAACTGGCCGCGCTGGAAAACGGCAGCGACCTCGATCGTCAGCTGCGCGAGGCCGGCATTGGCAGTTCGA
GCCACTCGGCCGACGACATTCTTGCACAGCTGATGGCACCGAAACATTCGGTCGAGCCCATCTTGCTGCCAGCGCCGACC
AGCCAAAAAGACTGA

Upstream 100 bases:

>100_bases
CGCCGGCCGAGACGGTGGTCGAGGAGGTCGCGATTCTGGCTGCCAATGCCGTCGATGCGGCCCACATGATTGAAGAATGG
AAAAGCGGGGAGATTGCAGC

Downstream 100 bases:

>100_bases
CAATCCCGGGAGCGGCAGCCCTGCCTGCCATCCGCGCGCTTATGGAATTGGAGCGCCGCAACCCAGCCTCTTAAAGCAGT
GGGGATCGCGGCATTTCAAT

Product: pspA family transcriptional regulator-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSTWGKIFTAIRGGINEVAEAAADSQSMRVLDQEIRDAEQSLRGARSDLAGIMASNKSVMRRLEENRAKETKDTDSARAA
ISAGRTDLAQGLAQRIAGTRAEVQRDQEELDRLLPRQQQMLRTIQETEARIAQMKREVENVKANESLLRAQSAIAHSQSG
INTRLGSAVESLERIKKRQEITAGRIEAGAELAALENGSDLDRQLREAGIGSSSHSADDILAQLMAPKHSVEPILLPAPT
SQKD

Sequences:

>Translated_244_residues
MSTWGKIFTAIRGGINEVAEAAADSQSMRVLDQEIRDAEQSLRGARSDLAGIMASNKSVMRRLEENRAKETKDTDSARAA
ISAGRTDLAQGLAQRIAGTRAEVQRDQEELDRLLPRQQQMLRTIQETEARIAQMKREVENVKANESLLRAQSAIAHSQSG
INTRLGSAVESLERIKKRQEITAGRIEAGAELAALENGSDLDRQLREAGIGSSSHSADDILAQLMAPKHSVEPILLPAPT
SQKD
>Mature_243_residues
STWGKIFTAIRGGINEVAEAAADSQSMRVLDQEIRDAEQSLRGARSDLAGIMASNKSVMRRLEENRAKETKDTDSARAAI
SAGRTDLAQGLAQRIAGTRAEVQRDQEELDRLLPRQQQMLRTIQETEARIAQMKREVENVKANESLLRAQSAIAHSQSGI
NTRLGSAVESLERIKKRQEITAGRIEAGAELAALENGSDLDRQLREAGIGSSSHSADDILAQLMAPKHSVEPILLPAPTS
QKD

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI1790625, Length=228, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 26617; Mature: 26486

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTWGKIFTAIRGGINEVAEAAADSQSMRVLDQEIRDAEQSLRGARSDLAGIMASNKSVM
CCHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RRLEENRAKETKDTDSARAAISAGRTDLAQGLAQRIAGTRAEVQRDQEELDRLLPRQQQM
HHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LRTIQETEARIAQMKREVENVKANESLLRAQSAIAHSQSGINTRLGSAVESLERIKKRQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ITAGRIEAGAELAALENGSDLDRQLREAGIGSSSHSADDILAQLMAPKHSVEPILLPAPT
HHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCC
SQKD
CCCC
>Mature Secondary Structure 
STWGKIFTAIRGGINEVAEAAADSQSMRVLDQEIRDAEQSLRGARSDLAGIMASNKSVM
CHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RRLEENRAKETKDTDSARAAISAGRTDLAQGLAQRIAGTRAEVQRDQEELDRLLPRQQQM
HHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
LRTIQETEARIAQMKREVENVKANESLLRAQSAIAHSQSGINTRLGSAVESLERIKKRQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ITAGRIEAGAELAALENGSDLDRQLREAGIGSSSHSADDILAQLMAPKHSVEPILLPAPT
HHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCC
SQKD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]