| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116248735
Identifier: 116248735
GI number: 116248735
Start: 58681
End: 59760
Strand: Reverse
Name: 116248735
Synonym: pRL120059
Alternate gene names: NA
Gene position: 59760-58681 (Counterclockwise)
Preceding gene: 116248736
Following gene: 116248734
Centisome position: 6.87
GC content: 65.65
Gene sequence:
>1080_bases ATGACCCCGTCGGCCATCTCGAGAAGGCAATTTCTGCTGGCCGGAATAGCGCTTCAGGTTCTAGGGCCCAAGATTGCCGC CGCGCAGCCGACGGGCACCAGCGATCATGGCATCGGCGGATCTGGACTTTCCATCCAGGGCGGCGGGGAGAACGAAGATC ACGGCATCGGCGGGACGGGCATCGTTGGAACCATCCAGGGTTTTGGAAGCATCATCGTCAACAACATCCACATCCCGTTC AGTGCGACGACACCGATCGAAATCGACGGCCGACGCGTTCGCGCGAGCGCGATGAAGGTCGGCCATGTCGCCCGGGTGCT GCTGACGGGCAAGCTTGCCGCCCGCATCACCATCGCCAGCGAAGTCCAGGGCCGCATCGACCGGATAAACAAGACCGGCA TGACCGTACTGGGGCAAACGATCGACACGACGGGTGTCGCGACGAAGGGCCTGCGCAAGGGCAAGCGGGTCGCCGTGTTC GGCATCCGCAAACCTGACGGTACGATCATTGCCCGGCGCATCGAGCCTCGCTCCGTTTCCGAAGGCGCCCATGTTCGAGG CATCCCCGTCAAGAGCAGCAATCGCGTCCTGATCGGCGGTCTTTCGCTTGGAAGCACGCATGGATACCTGGCCGGCAAGC AAACGCTCGTGCGTCTCAAGGCCGTCGCCGATCGATTGATCATCACGCGCATTCAGGCTGAACCCCTCGTGCCGGGCTTG AAACACGGCATCGTCAACGTCGAGACCTTCCGGCCGACCGATAAGGACCGGCCGGGCGCGGGACCCGGAGGGTCCGCGCC TTTCGGCTCGGGGCCGCCATCTCCTGATGGTCATGGCTTCGTCGATGTCGGCGTGCGGGACTCAAGCAGAATGACCGGCT TTCCCGACGGGCGCATTCCGGACGGCTTCGGTTCGCGACGTCCAGGAGGACCTTCGGATCGACCGCCGCCCGATCGTTCG CCCTTCGGCAGAGGCGGGCCGGACCGAGATTTTCCCGCTCCGGATAGAGGCGGACCGCCACCGCAGGACGGCCCGCCGCC TGGGCCGCCGCCACCGGGCCCAGGCCCGGGTCCGCGCTGA
Upstream 100 bases:
>100_bases CCGGCGGCAACAGCCGCTGGATCGCCGGGCTCTATGTCATGACCGAGGAGGGCGAGGCCGATCTTCAGGCAGACACCGCA TCCAAGACGGAGACGGACGA
Downstream 100 bases:
>100_bases AAACGCTGTCGCCGCATGTTGACAAATGGGAAATTTTCCCATTTATTGTTCATGCGAATTCTGCTTCGGGTGATTCCAGG GAGGGTTTGCCGATTGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTPSAISRRQFLLAGIALQVLGPKIAAAQPTGTSDHGIGGSGLSIQGGGENEDHGIGGTGIVGTIQGFGSIIVNNIHIPF SATTPIEIDGRRVRASAMKVGHVARVLLTGKLAARITIASEVQGRIDRINKTGMTVLGQTIDTTGVATKGLRKGKRVAVF GIRKPDGTIIARRIEPRSVSEGAHVRGIPVKSSNRVLIGGLSLGSTHGYLAGKQTLVRLKAVADRLIITRIQAEPLVPGL KHGIVNVETFRPTDKDRPGAGPGGSAPFGSGPPSPDGHGFVDVGVRDSSRMTGFPDGRIPDGFGSRRPGGPSDRPPPDRS PFGRGGPDRDFPAPDRGGPPPQDGPPPGPPPPGPGPGPR
Sequences:
>Translated_359_residues MTPSAISRRQFLLAGIALQVLGPKIAAAQPTGTSDHGIGGSGLSIQGGGENEDHGIGGTGIVGTIQGFGSIIVNNIHIPF SATTPIEIDGRRVRASAMKVGHVARVLLTGKLAARITIASEVQGRIDRINKTGMTVLGQTIDTTGVATKGLRKGKRVAVF GIRKPDGTIIARRIEPRSVSEGAHVRGIPVKSSNRVLIGGLSLGSTHGYLAGKQTLVRLKAVADRLIITRIQAEPLVPGL KHGIVNVETFRPTDKDRPGAGPGGSAPFGSGPPSPDGHGFVDVGVRDSSRMTGFPDGRIPDGFGSRRPGGPSDRPPPDRS PFGRGGPDRDFPAPDRGGPPPQDGPPPGPPPPGPGPGPR >Mature_358_residues TPSAISRRQFLLAGIALQVLGPKIAAAQPTGTSDHGIGGSGLSIQGGGENEDHGIGGTGIVGTIQGFGSIIVNNIHIPFS ATTPIEIDGRRVRASAMKVGHVARVLLTGKLAARITIASEVQGRIDRINKTGMTVLGQTIDTTGVATKGLRKGKRVAVFG IRKPDGTIIARRIEPRSVSEGAHVRGIPVKSSNRVLIGGLSLGSTHGYLAGKQTLVRLKAVADRLIITRIQAEPLVPGLK HGIVNVETFRPTDKDRPGAGPGGSAPFGSGPPSPDGHGFVDVGVRDSSRMTGFPDGRIPDGFGSRRPGGPSDRPPPDRSP FGRGGPDRDFPAPDRGGPPPQDGPPPGPPPPGPGPGPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36920; Mature: 36788
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSAISRRQFLLAGIALQVLGPKIAAAQPTGTSDHGIGGSGLSIQGGGENEDHGIGGTG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC IVGTIQGFGSIIVNNIHIPFSATTPIEIDGRRVRASAMKVGHVARVLLTGKLAARITIAS CEEEHHHCCEEEEEEEEECCCCCCCEEECCCEEEHHHHHHHHHHHHHHHCCEEEEEEEHH EVQGRIDRINKTGMTVLGQTIDTTGVATKGLRKGKRVAVFGIRKPDGTIIARRIEPRSVS HHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCCC EGAHVRGIPVKSSNRVLIGGLSLGSTHGYLAGKQTLVRLKAVADRLIITRIQAEPLVPGL CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCH KHGIVNVETFRPTDKDRPGAGPGGSAPFGSGPPSPDGHGFVDVGVRDSSRMTGFPDGRIP HHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC DGFGSRRPGGPSDRPPPDRSPFGRGGPDRDFPAPDRGGPPPQDGPPPGPPPPGPGPGPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TPSAISRRQFLLAGIALQVLGPKIAAAQPTGTSDHGIGGSGLSIQGGGENEDHGIGGTG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC IVGTIQGFGSIIVNNIHIPFSATTPIEIDGRRVRASAMKVGHVARVLLTGKLAARITIAS CEEEHHHCCEEEEEEEEECCCCCCCEEECCCEEEHHHHHHHHHHHHHHHCCEEEEEEEHH EVQGRIDRINKTGMTVLGQTIDTTGVATKGLRKGKRVAVFGIRKPDGTIIARRIEPRSVS HHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCCEEEEEEEECCCCCEEEEECCCCCCC EGAHVRGIPVKSSNRVLIGGLSLGSTHGYLAGKQTLVRLKAVADRLIITRIQAEPLVPGL CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCH KHGIVNVETFRPTDKDRPGAGPGGSAPFGSGPPSPDGHGFVDVGVRDSSRMTGFPDGRIP HHCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC DGFGSRRPGGPSDRPPPDRSPFGRGGPDRDFPAPDRGGPPPQDGPPPGPPPPGPGPGPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA