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The map label for this gene is ugpE [H]

Identifier: 116248689

GI number: 116248689

Start: 12576

End: 13424

Strand: Direct

Name: ugpE [H]

Synonym: pRL120013

Alternate gene names: 116248689

Gene position: 12576-13424 (Clockwise)

Preceding gene: 116248688

Following gene: 116248690

Centisome position: 1.45

GC content: 56.42

Gene sequence:

>849_bases
ATGGTTGAAAATCGCCCTTTCCTGAATTTCCTGGCGCACCTTGTCCTCATCATTGGCGTCACGATCGTCGTATTTCCGGT
CTACGTGGCTTTCATCGCATCGAGCCACGGTCCAAACGACTTCCTGTCAGGCGTCGTGCCGCTGACACCGGGAAGCCATA
TCATCGAGAACTATTCGACGATGCTGTCGTCGGGAATGACAAGCTCCGGGGCGCCGCCGATCGGGCCGATGATGATCAAC
TCGCTGATCATGGCGGTTGGCGTCGCCGTCGGGAAGATCGCTATTTCGATCCTTTCGGCCTTTGCCATCGTCTATTTCCG
GTTTCCGTTCCGGACCTTGGCATTCTGGATGATCTTCATCACGCTGATGCTGCCGGTCGAGGTACGCATCGTGCCGACCT
ATAAAGTCGTCGCCGATCTTGGAATGCTGAACAATTACGGCGGCCTCATCATTCCGCTGATCGCATCGGCAACGGCAACC
TTCCTGTTTCGCCAGTTCTTTCTGACAGTCCCCGACGAACTCATGGAGGCTGCCCGTGTCGATGGGGCAGGGCCGATGAA
GTTCTTCCGCGATATCCTGCTGCCGCTGTCGATCACCAACATCGCAGCATTGTTCATCATCCTGTTTGTGCTCGGCTGGA
ACCAGTATCTGTGGCCGCTCATCATAACGACCGACCAGAGCTTCTATACCGTCGTGATGGGAATCCAGCGCATGGCAGCG
GTTGCCGATGCCGAGCCTCGCTGGAACCTAGTGATGGCAGCCGTCATTCTGGCCGCACTACCACCCGTCCTCGTCATCGT
CGCCATGCAACGCCTTTTTGTCAAAGGCCTGGTCGAAACGGAGAAATGA

Upstream 100 bases:

>100_bases
GGCGGCGCAGTCGGTCATTCTCATGGTGATCGTCATCGCTCTGACCGCGGTCCAATTCCGCTTCATCGAACGCCGCGTGC
AATATTGAGGAATCCCGAGG

Downstream 100 bases:

>100_bases
AATGGCAACGATCAATATCATCGACGTCAAGAAGAATTATGGTGCCGTTCCGGCGGTCAAGGGTATCAACCTGTCTGTTG
CAGACGGCGAACTCATCGTC

Product: putative permease component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MVENRPFLNFLAHLVLIIGVTIVVFPVYVAFIASSHGPNDFLSGVVPLTPGSHIIENYSTMLSSGMTSSGAPPIGPMMIN
SLIMAVGVAVGKIAISILSAFAIVYFRFPFRTLAFWMIFITLMLPVEVRIVPTYKVVADLGMLNNYGGLIIPLIASATAT
FLFRQFFLTVPDELMEAARVDGAGPMKFFRDILLPLSITNIAALFIILFVLGWNQYLWPLIITTDQSFYTVVMGIQRMAA
VADAEPRWNLVMAAVILAALPPVLVIVAMQRLFVKGLVETEK

Sequences:

>Translated_282_residues
MVENRPFLNFLAHLVLIIGVTIVVFPVYVAFIASSHGPNDFLSGVVPLTPGSHIIENYSTMLSSGMTSSGAPPIGPMMIN
SLIMAVGVAVGKIAISILSAFAIVYFRFPFRTLAFWMIFITLMLPVEVRIVPTYKVVADLGMLNNYGGLIIPLIASATAT
FLFRQFFLTVPDELMEAARVDGAGPMKFFRDILLPLSITNIAALFIILFVLGWNQYLWPLIITTDQSFYTVVMGIQRMAA
VADAEPRWNLVMAAVILAALPPVLVIVAMQRLFVKGLVETEK
>Mature_282_residues
MVENRPFLNFLAHLVLIIGVTIVVFPVYVAFIASSHGPNDFLSGVVPLTPGSHIIENYSTMLSSGMTSSGAPPIGPMMIN
SLIMAVGVAVGKIAISILSAFAIVYFRFPFRTLAFWMIFITLMLPVEVRIVPTYKVVADLGMLNNYGGLIIPLIASATAT
FLFRQFFLTVPDELMEAARVDGAGPMKFFRDILLPLSITNIAALFIILFVLGWNQYLWPLIITTDQSFYTVVMGIQRMAA
VADAEPRWNLVMAAVILAALPPVLVIVAMQRLFVKGLVETEK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=282, Percent_Identity=54.9645390070922, Blast_Score=328, Evalue=2e-91,
Organism=Escherichia coli, GI1787571, Length=261, Percent_Identity=27.9693486590038, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1790464, Length=281, Percent_Identity=28.1138790035587, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30916; Mature: 30916

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVENRPFLNFLAHLVLIIGVTIVVFPVYVAFIASSHGPNDFLSGVVPLTPGSHIIENYST
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHH
MLSSGMTSSGAPPIGPMMINSLIMAVGVAVGKIAISILSAFAIVYFRFPFRTLAFWMIFI
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMLPVEVRIVPTYKVVADLGMLNNYGGLIIPLIASATATFLFRQFFLTVPDELMEAARV
HHHHCHHEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
DGAGPMKFFRDILLPLSITNIAALFIILFVLGWNQYLWPLIITTDQSFYTVVMGIQRMAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHHH
VADAEPRWNLVMAAVILAALPPVLVIVAMQRLFVKGLVETEK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVENRPFLNFLAHLVLIIGVTIVVFPVYVAFIASSHGPNDFLSGVVPLTPGSHIIENYST
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHH
MLSSGMTSSGAPPIGPMMINSLIMAVGVAVGKIAISILSAFAIVYFRFPFRTLAFWMIFI
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMLPVEVRIVPTYKVVADLGMLNNYGGLIIPLIASATATFLFRQFFLTVPDELMEAARV
HHHHCHHEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
DGAGPMKFFRDILLPLSITNIAALFIILFVLGWNQYLWPLIITTDQSFYTVVMGIQRMAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCHHHHHHHHHHHHHH
VADAEPRWNLVMAAVILAALPPVLVIVAMQRLFVKGLVETEK
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]