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The map label for this gene is ccmC [H]

Identifier: 114800532

GI number: 114800532

Start: 3652819

End: 3653547

Strand: Direct

Name: ccmC [H]

Synonym: HNE_3517

Alternate gene names: 114800532

Gene position: 3652819-3653547 (Clockwise)

Preceding gene: 114800180

Following gene: 114798547

Centisome position: 98.59

GC content: 63.1

Gene sequence:

>729_bases
ATGTGGTCTGCCTTTGCCAATCCGCACAAGTTTCTGAAATTCTCCGCTGTTGCGGCGCCCCTTTTCTATGGAGCGGGAAT
GCTCTGCATTCTGTGGGGCCTTTGGCAGGGGCTGTGGATCGTGCCCAAGGACGACTATCAGGGCGGGGACATCATGCGGG
TGATGTTCATACACGTGCCCGCCGCCTGGCTGGCGATGGTGAGCTATTCAGGCCTAGCGGTGGCAAGTTTCGTCTGGTTC
ATCTGGCGCCATGAGCTCGCTGACATTGCCGCCAAGGCGATTGCCCCGCTCGGCGCGGTGTGGACGGCGCTGTGCCTGGC
CACCGGCTCCATCTGGGGCAAGCCGACCTGGGGCACCTGGTGGCAATGGGATGATGCGCGGATGATGTCCGTTCTGTTCC
TGCTGTTCCTGTTCCTGGGATACATGGCGCTGCGCGCCTCAATGGATTCGCGCCAGAAGGCCGCGCGCGCCGGGGCGATC
CTGGCGATGGTGGGCGCAGTAAACGTGCCCCTGATCAAATTCTCCGTGGACCTCTTCACCTCGCTGCATCAACCCGCCAG
CGTGATCACCGCAGACGGCCCGAAGATGGCGGCGGTTTACCTGACGCCCCTGCTGATCTCGGGCCTTGGCCACGCGTTGC
TGTTTGGCGGCCTCGTGATGACCCATATGCGCACCGAAATCCGTGAGCGGCGGATTGCCCGCCTCACGGCGCAGGCGCTG
GAAGGATAG

Upstream 100 bases:

>100_bases
TGGCCGCTTCCACCCTCTTTGCCTGCGCTGTTGCGCCCTATGCCATGGCCGCTGCCTTGCGCTTGGCGGCGGACTGAGGG
GAGGCTATCTCGATACCATC

Downstream 100 bases:

>100_bases
GCGATGCCCGAATTCGACAAGAACGCCGCCTATATCTGGGCCTGCTACCTGATCGGCGCGGCGCTGATTGCCGGGGCCTG
CCTTCAGGCCTGGCTTGCCG

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycZ [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MWSAFANPHKFLKFSAVAAPLFYGAGMLCILWGLWQGLWIVPKDDYQGGDIMRVMFIHVPAAWLAMVSYSGLAVASFVWF
IWRHELADIAAKAIAPLGAVWTALCLATGSIWGKPTWGTWWQWDDARMMSVLFLLFLFLGYMALRASMDSRQKAARAGAI
LAMVGAVNVPLIKFSVDLFTSLHQPASVITADGPKMAAVYLTPLLISGLGHALLFGGLVMTHMRTEIRERRIARLTAQAL
EG

Sequences:

>Translated_242_residues
MWSAFANPHKFLKFSAVAAPLFYGAGMLCILWGLWQGLWIVPKDDYQGGDIMRVMFIHVPAAWLAMVSYSGLAVASFVWF
IWRHELADIAAKAIAPLGAVWTALCLATGSIWGKPTWGTWWQWDDARMMSVLFLLFLFLGYMALRASMDSRQKAARAGAI
LAMVGAVNVPLIKFSVDLFTSLHQPASVITADGPKMAAVYLTPLLISGLGHALLFGGLVMTHMRTEIRERRIARLTAQAL
EG
>Mature_242_residues
MWSAFANPHKFLKFSAVAAPLFYGAGMLCILWGLWQGLWIVPKDDYQGGDIMRVMFIHVPAAWLAMVSYSGLAVASFVWF
IWRHELADIAAKAIAPLGAVWTALCLATGSIWGKPTWGTWWQWDDARMMSVLFLLFLFLGYMALRASMDSRQKAARAGAI
LAMVGAVNVPLIKFSVDLFTSLHQPASVITADGPKMAAVYLTPLLISGLGHALLFGGLVMTHMRTEIRERRIARLTAQAL
EG

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=191, Percent_Identity=43.455497382199, Blast_Score=147, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 26688; Mature: 26688

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1850420; 12597275 [H]