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The map label for this gene is 114800508

Identifier: 114800508

GI number: 114800508

Start: 3557019

End: 3557504

Strand: Direct

Name: 114800508

Synonym: HNE_3414

Alternate gene names: NA

Gene position: 3557019-3557504 (Clockwise)

Preceding gene: 114799395

Following gene: 114800036

Centisome position: 96.01

GC content: 65.64

Gene sequence:

>486_bases
ATGGACACATTGGCGACAGAAACGGGCGCGCCGGCGGGTGCTGGCGGGCCGGAGCGGCTGATCGAAGGCCGCGACTTTCA
CGGCGCTGATCTTCGCGACCAGGACTTTGCCGGGGTCCGGTTTCGCAATTGCGAACTTCGGGGCGCGCGCCTTGATTGGG
CAAACCTTGCCGGGGCGTGCCTCAATCATGCGCGGCTTCTGAACGCCTCGATGACGCATGCGCATCTGCGCGGCGCTTCG
ATGAAGGGAACAAATCTGCGGCTGGCCAAACTGGCCCAGGCCAATCTGGCGGGCGCGGACATGACCGGCGCCAATCTCTG
GCAGGCCGATCTGTCCGGCGCCAACCTGTGCGGCGCGACCTGCCTTTGGGGCGACATTGCCAAAGCCTGCTTTGCCGGCG
CCCTCTATGACGATGCCACGCAGCTACCGCCCGGCTTTCATCCAGAGGCCGAGGGCATGATCCGCTTCGACATGCCGCGC
GCTTGA

Upstream 100 bases:

>100_bases
TCTGCCGGTCACGAAGAGGTGTCAATGCCGGGCCTTTCAATGCCCGGCGAATACGCACACATGGACAAACTGGGACAAAG
CGGGACACTTCGGGGCATCG

Downstream 100 bases:

>100_bases
CCTTAGCCGCGCGCGCCCCCATCCCTCTGCGCAGATGACCAGGCTCAAGGCCATTCTCGGCCCCACCAATACCGGCAAGA
CGCATTACGCCATTGAGCGG

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MDTLATETGAPAGAGGPERLIEGRDFHGADLRDQDFAGVRFRNCELRGARLDWANLAGACLNHARLLNASMTHAHLRGAS
MKGTNLRLAKLAQANLAGADMTGANLWQADLSGANLCGATCLWGDIAKACFAGALYDDATQLPPGFHPEAEGMIRFDMPR
A

Sequences:

>Translated_161_residues
MDTLATETGAPAGAGGPERLIEGRDFHGADLRDQDFAGVRFRNCELRGARLDWANLAGACLNHARLLNASMTHAHLRGAS
MKGTNLRLAKLAQANLAGADMTGANLWQADLSGANLCGATCLWGDIAKACFAGALYDDATQLPPGFHPEAEGMIRFDMPR
A
>Mature_161_residues
MDTLATETGAPAGAGGPERLIEGRDFHGADLRDQDFAGVRFRNCELRGARLDWANLAGACLNHARLLNASMTHAHLRGAS
MKGTNLRLAKLAQANLAGADMTGANLWQADLSGANLCGATCLWGDIAKACFAGALYDDATQLPPGFHPEAEGMIRFDMPR
A

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 17022; Mature: 17022

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLATETGAPAGAGGPERLIEGRDFHGADLRDQDFAGVRFRNCELRGARLDWANLAGAC
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCCCCHHHHHHHH
LNHARLLNASMTHAHLRGASMKGTNLRLAKLAQANLAGADMTGANLWQADLSGANLCGAT
HHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHH
CLWGDIAKACFAGALYDDATQLPPGFHPEAEGMIRFDMPRA
HHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MDTLATETGAPAGAGGPERLIEGRDFHGADLRDQDFAGVRFRNCELRGARLDWANLAGAC
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCCCCHHHHHHHH
LNHARLLNASMTHAHLRGASMKGTNLRLAKLAQANLAGADMTGANLWQADLSGANLCGAT
HHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHH
CLWGDIAKACFAGALYDDATQLPPGFHPEAEGMIRFDMPRA
HHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]