| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is iap [C]
Identifier: 114800468
GI number: 114800468
Start: 2014517
End: 2015533
Strand: Reverse
Name: iap [C]
Synonym: HNE_1945
Alternate gene names: 114800468
Gene position: 2015533-2014517 (Counterclockwise)
Preceding gene: 114798327
Following gene: 114799685
Centisome position: 54.4
GC content: 65.19
Gene sequence:
>1017_bases ATGCTGATCGGCGGCGGCGTGGTGCTGGCCATCATCCTAGGCGCCTGGCTGTTCTGGCCGGATGGCGAAGAGGCGCTGCC CGGTGTCAGCTATCGGCCCGTGTATGTTGATGCCGGGGAGATGCTGCATCTGGCGCAGGTGCTGTCCTCCGACGCGCTGG AGGGACGGGCGAGCGGCACGGGCGGCAATGAGGCAGCGCGCGGGTTTATCCACAAGCGCTTTGAGGAGATCGGCCTGCTG CCCCTGCCGGGGTTCAGCGCCTATACGCACACCTTTCCCATCGTGCCGCGGGAGGCAGACGCCGCGCCGATCATCGGAGC AAATCTGATTGGCTACATCCCCGGCCGGACGCCGGGCGAGGGGCCGGCGCTGCTGATCACGGCGCACTATGATCATCTGG GCGTGCGCGAGGGCGAGATATACAATGGCGCGGATGACAATGCCTCGGGGGCTTCGGCCCTGGTGGCGGTGGCGGAGTAT TTCGCGCTGCACCGGCCCGAGCATGACATCATCATTGCGGCGCTGGACGCCGAGGAAATCGGCCTGCTGGGCGCACGGGC GCTGGCACGGATGGAGGGGCTGAACCTTTCGCGGGTGGCGCTGAACATGAATTTCGACATGGTGGGGCGTTCCGAAGCGG GTGAGCTTTATGTGGCGGGGACGTATCATGCGCCCGAGCTGGTGCCGGTGATGGAGGCGGTGGCCGAGGGGGCGCCGGTT ACGCTGCGGATGGGGCATGACCGGCCGGAGGACGGCCCGAATGACTGGACGTTGCAGTCCGATCATGGGGTGTTTCATCA GGCGGGGTTGCCGATCCTCTATTTCGGGGTGGAGGACCATCCGGGTTACCACAATCCCGGCGATGACTTTGAATTCCTGA CGCTCGACTTTTTCGTGCGCGCTGCCGACACGCTGGTTATGGCGGCACTGGCGGTGGACGCCGAGCTTCCCCAGATACAT TCCCTGCGCCGCAGCCCGGTCGCAGAAGCAGATCAACCAGAAGGAAACGCTCAATGA
Upstream 100 bases:
>100_bases TCAATCAGGTGACTAGGCACATGCGGCGGCGCGTCTTAAGGGTCAAGGCATGAGCGACAAGAAACCCTTTAAACCGCACT TGCGTTTCGGCGCGCGGGAC
Downstream 100 bases:
>100_bases CCACCACGACGGTCTCCCACATCCTCAAGGCTTCGACGGGGCAGACCCTCGGCGCGCTGAAAGGCATGCTGATCAAGGGC GAGGCTTATGCCCGCAAGCT
Product: M20/M25/M40 family peptidase
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; M28 Family Aminopeptidase; WD40-Like Beta Propeller; M20/M25/M40 Family Peptidase; PDZ Domain-Containing Protein
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLIGGGVVLAIILGAWLFWPDGEEALPGVSYRPVYVDAGEMLHLAQVLSSDALEGRASGTGGNEAARGFIHKRFEEIGLL PLPGFSAYTHTFPIVPREADAAPIIGANLIGYIPGRTPGEGPALLITAHYDHLGVREGEIYNGADDNASGASALVAVAEY FALHRPEHDIIIAALDAEEIGLLGARALARMEGLNLSRVALNMNFDMVGRSEAGELYVAGTYHAPELVPVMEAVAEGAPV TLRMGHDRPEDGPNDWTLQSDHGVFHQAGLPILYFGVEDHPGYHNPGDDFEFLTLDFFVRAADTLVMAALAVDAELPQIH SLRRSPVAEADQPEGNAQ
Sequences:
>Translated_338_residues MLIGGGVVLAIILGAWLFWPDGEEALPGVSYRPVYVDAGEMLHLAQVLSSDALEGRASGTGGNEAARGFIHKRFEEIGLL PLPGFSAYTHTFPIVPREADAAPIIGANLIGYIPGRTPGEGPALLITAHYDHLGVREGEIYNGADDNASGASALVAVAEY FALHRPEHDIIIAALDAEEIGLLGARALARMEGLNLSRVALNMNFDMVGRSEAGELYVAGTYHAPELVPVMEAVAEGAPV TLRMGHDRPEDGPNDWTLQSDHGVFHQAGLPILYFGVEDHPGYHNPGDDFEFLTLDFFVRAADTLVMAALAVDAELPQIH SLRRSPVAEADQPEGNAQ >Mature_338_residues MLIGGGVVLAIILGAWLFWPDGEEALPGVSYRPVYVDAGEMLHLAQVLSSDALEGRASGTGGNEAARGFIHKRFEEIGLL PLPGFSAYTHTFPIVPREADAAPIIGANLIGYIPGRTPGEGPALLITAHYDHLGVREGEIYNGADDNASGASALVAVAEY FALHRPEHDIIIAALDAEEIGLLGARALARMEGLNLSRVALNMNFDMVGRSEAGELYVAGTYHAPELVPVMEAVAEGAPV TLRMGHDRPEDGPNDWTLQSDHGVFHQAGLPILYFGVEDHPGYHNPGDDFEFLTLDFFVRAADTLVMAALAVDAELPQIH SLRRSPVAEADQPEGNAQ
Specific function: This Protein, Presumably An Aminopeptidase, Mediates The Conversion Of E.Coli Alkaline Phosphatase Isozyme 1, To Isozymes 2 And 3 By Removing, One By One, The Two Amino-Terminal Arginine Residues. [C]
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.11.- [C]
Molecular weight: Translated: 36082; Mature: 36082
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGGGVVLAIILGAWLFWPDGEEALPGVSYRPVYVDAGEMLHLAQVLSSDALEGRASGT CEECCHHHHHHHHHHHEECCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC GGNEAARGFIHKRFEEIGLLPLPGFSAYTHTFPIVPREADAAPIIGANLIGYIPGRTPGE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCEEECCCCCCCC GPALLITAHYDHLGVREGEIYNGADDNASGASALVAVAEYFALHRPEHDIIIAALDAEEI CCEEEEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHH GLLGARALARMEGLNLSRVALNMNFDMVGRSEAGELYVAGTYHAPELVPVMEAVAEGAPV HHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCE TLRMGHDRPEDGPNDWTLQSDHGVFHQAGLPILYFGVEDHPGYHNPGDDFEFLTLDFFVR EEEECCCCCCCCCCCCEEECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHH AADTLVMAALAVDAELPQIHSLRRSPVAEADQPEGNAQ HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLIGGGVVLAIILGAWLFWPDGEEALPGVSYRPVYVDAGEMLHLAQVLSSDALEGRASGT CEECCHHHHHHHHHHHEECCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC GGNEAARGFIHKRFEEIGLLPLPGFSAYTHTFPIVPREADAAPIIGANLIGYIPGRTPGE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCEEECCCCCCCC GPALLITAHYDHLGVREGEIYNGADDNASGASALVAVAEYFALHRPEHDIIIAALDAEEI CCEEEEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHH GLLGARALARMEGLNLSRVALNMNFDMVGRSEAGELYVAGTYHAPELVPVMEAVAEGAPV HHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCE TLRMGHDRPEDGPNDWTLQSDHGVFHQAGLPILYFGVEDHPGYHNPGDDFEFLTLDFFVR EEEECCCCCCCCCCCCEEECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHH AADTLVMAALAVDAELPQIHSLRRSPVAEADQPEGNAQ HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA