| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is guaB [H]
Identifier: 114800464
GI number: 114800464
Start: 1849300
End: 1850757
Strand: Direct
Name: guaB [H]
Synonym: HNE_1804
Alternate gene names: 114800464
Gene position: 1849300-1850757 (Clockwise)
Preceding gene: 114797683
Following gene: 114798023
Centisome position: 49.91
GC content: 63.1
Gene sequence:
>1458_bases ATGAAAATCCGACAAGCGATCACCTTCGACGACGTGCTTCTGCAGCCCGGCGCGAGCGAGGTATTGCCCGCAGACGTCAA CGTCTCAACCTTCCTGACAAAAGCTATACCGCTGAACATTCCGCTGCTTTCAGCGGCCATGGATACGGTCACAGAAGCCC GCCTCGCCATTGCGATGGCCCAGGCCGGTGGCATCGGGGTTATTCACCGTAACCTGACCATCGAACAACAGGCCGGCGAA GTGGCGATGGTCAAGAAGTATGAGAGCGGGGTGGTAATGAACCCCATCACGATCAGCCCGGACGCTACGCTTGGCGAGCT TCGCGAAGTCAAGAAACGCACGGGCTTCTCCGGCATCCCGGTCGTCGAGAAAAGCGGCAAGGTGCTTGGCATTGTGACGA ACCGCGATACGCGCTTCGCCGATGACCTCAACGAGAAGGTCGCCACCCTGATGACCCGCAATGTGGTCACGGCGCAAATG GACATGGACCCCGCCGAAGCGCGCCGCTTGCTCCACAAACACCGGATCGAGCGCCTCGTGATTGTCGATCATGACGGCCG CTGCCTCGGATTGCTGACCGTCAAGGACATGGACAAGGCCGCCGTGCACCCGCACGCCGCCAAGGACGCCGCCGGGCGGC TGCGCGTTGCGGCAGCGTCCACTGTGGGCGATGCAGGCTTTGAGCGAACGATGGCGCTCATCGAGGCCGGGGCGGACGCG ATCATCATCGACACCGCCCATGGCCACTCCATATCCGTCGCCGAAGCCGTCACCCGCGCCAAGAAGATATCCAACTCGGT CCAGATCATCGCGGGCAACGTAGCCACCGGTGAAGCCACCAAAGCTCTGATCGACGCAGGAGCCGACGCAGTCAAAGTCG GCATCGGCCCTGGCTCCATCTGCACAACGCGCATCGTTGCCGGCGTTGGCGTTCCTCAACTCACCGCCATTGAACAATGC GCGACCGCCGCTCTGGCCTCCGGTGTCCCGATCATTGCAGACGGCGGCATCAAGTTCTCCGGCGACTTCGCCAAGGCGCT CGCCGCCGGCGCGTCGACCGCCATGATGGGCTCCATGTTCGCCGGTACTGAAGAGGCGCCCGGCGAGGTGTTCCTCTACC AGGGGCGCAGCTATAAAGCCTATCGCGGTATGGGCAGCCTCGGCGCCATGGCGCGCGGCTCGGCAGACCGCTACTTCCAG AAAGACGCCGCCGCAGAAAAGCTCGTGCCCGAAGGCATCGAAGGGCAGGTGCCCTTCAAAGGCCCCGTCGGCGCGATCAT TCACCAGATGGTCGGCGGCCTGCGCGCCGCGATGGGCTATGTCGGCGCCAAGGATATTGCCGAGCTTCACCAGAAGGCCG AGTTTGTGCAGATCACCGGCGCCGGACTCAACGAAAGCCATGTCCACGACGTGATGATGACACGCGAAGCGCCGAACTAC TCCCTGTCGAGGGGGTAG
Upstream 100 bases:
>100_bases AGGGCGTGCCTGCATTCGAGAGATTTCCCGGCAGGTAAGCATGAGGGGACTTCACAAGCCTTCACGACTCCCTTAGTAGG CCAAAAAGGGAGCTCCCCAC
Downstream 100 bases:
>100_bases CCTAAACGTAAAGTCCCTTGGGTTCCCGCCACATTGCCTCAAGTGGCGGGGCACCTGGGCCAGGCTCGAACAGCTTCATC CGTTCAAACCCATGGCTCAT
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MKIRQAITFDDVLLQPGASEVLPADVNVSTFLTKAIPLNIPLLSAAMDTVTEARLAIAMAQAGGIGVIHRNLTIEQQAGE VAMVKKYESGVVMNPITISPDATLGELREVKKRTGFSGIPVVEKSGKVLGIVTNRDTRFADDLNEKVATLMTRNVVTAQM DMDPAEARRLLHKHRIERLVIVDHDGRCLGLLTVKDMDKAAVHPHAAKDAAGRLRVAAASTVGDAGFERTMALIEAGADA IIIDTAHGHSISVAEAVTRAKKISNSVQIIAGNVATGEATKALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIEQC ATAALASGVPIIADGGIKFSGDFAKALAAGASTAMMGSMFAGTEEAPGEVFLYQGRSYKAYRGMGSLGAMARGSADRYFQ KDAAAEKLVPEGIEGQVPFKGPVGAIIHQMVGGLRAAMGYVGAKDIAELHQKAEFVQITGAGLNESHVHDVMMTREAPNY SLSRG
Sequences:
>Translated_485_residues MKIRQAITFDDVLLQPGASEVLPADVNVSTFLTKAIPLNIPLLSAAMDTVTEARLAIAMAQAGGIGVIHRNLTIEQQAGE VAMVKKYESGVVMNPITISPDATLGELREVKKRTGFSGIPVVEKSGKVLGIVTNRDTRFADDLNEKVATLMTRNVVTAQM DMDPAEARRLLHKHRIERLVIVDHDGRCLGLLTVKDMDKAAVHPHAAKDAAGRLRVAAASTVGDAGFERTMALIEAGADA IIIDTAHGHSISVAEAVTRAKKISNSVQIIAGNVATGEATKALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIEQC ATAALASGVPIIADGGIKFSGDFAKALAAGASTAMMGSMFAGTEEAPGEVFLYQGRSYKAYRGMGSLGAMARGSADRYFQ KDAAAEKLVPEGIEGQVPFKGPVGAIIHQMVGGLRAAMGYVGAKDIAELHQKAEFVQITGAGLNESHVHDVMMTREAPNY SLSRG >Mature_485_residues MKIRQAITFDDVLLQPGASEVLPADVNVSTFLTKAIPLNIPLLSAAMDTVTEARLAIAMAQAGGIGVIHRNLTIEQQAGE VAMVKKYESGVVMNPITISPDATLGELREVKKRTGFSGIPVVEKSGKVLGIVTNRDTRFADDLNEKVATLMTRNVVTAQM DMDPAEARRLLHKHRIERLVIVDHDGRCLGLLTVKDMDKAAVHPHAAKDAAGRLRVAAASTVGDAGFERTMALIEAGADA IIIDTAHGHSISVAEAVTRAKKISNSVQIIAGNVATGEATKALIDAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIEQC ATAALASGVPIIADGGIKFSGDFAKALAAGASTAMMGSMFAGTEEAPGEVFLYQGRSYKAYRGMGSLGAMARGSADRYFQ KDAAAEKLVPEGIEGQVPFKGPVGAIIHQMVGGLRAAMGYVGAKDIAELHQKAEFVQITGAGLNESHVHDVMMTREAPNY SLSRG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=455, Percent_Identity=40.2197802197802, Blast_Score=309, Evalue=5e-84, Organism=Homo sapiens, GI34328928, Length=455, Percent_Identity=40.2197802197802, Blast_Score=308, Evalue=7e-84, Organism=Homo sapiens, GI156616279, Length=455, Percent_Identity=40.2197802197802, Blast_Score=308, Evalue=1e-83, Organism=Homo sapiens, GI34328930, Length=455, Percent_Identity=40.2197802197802, Blast_Score=307, Evalue=1e-83, Organism=Homo sapiens, GI66933016, Length=456, Percent_Identity=39.6929824561403, Blast_Score=306, Evalue=3e-83, Organism=Homo sapiens, GI217035152, Length=460, Percent_Identity=40, Blast_Score=303, Evalue=3e-82, Organism=Homo sapiens, GI217035148, Length=455, Percent_Identity=39.5604395604396, Blast_Score=299, Evalue=4e-81, Organism=Homo sapiens, GI217035150, Length=455, Percent_Identity=36.9230769230769, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI50541954, Length=270, Percent_Identity=40.3703703703704, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI50541952, Length=270, Percent_Identity=40.3703703703704, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI50541948, Length=270, Percent_Identity=40.3703703703704, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI50541956, Length=270, Percent_Identity=40.3703703703704, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI156104880, Length=262, Percent_Identity=40.0763358778626, Blast_Score=172, Evalue=5e-43, Organism=Escherichia coli, GI1788855, Length=485, Percent_Identity=57.319587628866, Blast_Score=519, Evalue=1e-148, Organism=Escherichia coli, GI1786293, Length=245, Percent_Identity=39.5918367346939, Blast_Score=170, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71994385, Length=481, Percent_Identity=36.5904365904366, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI71994389, Length=426, Percent_Identity=39.2018779342723, Blast_Score=258, Evalue=3e-69, Organism=Caenorhabditis elegans, GI17560440, Length=238, Percent_Identity=39.0756302521008, Blast_Score=171, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6322012, Length=485, Percent_Identity=39.3814432989691, Blast_Score=330, Evalue=2e-91, Organism=Saccharomyces cerevisiae, GI6323464, Length=485, Percent_Identity=41.0309278350515, Blast_Score=329, Evalue=5e-91, Organism=Saccharomyces cerevisiae, GI6323585, Length=461, Percent_Identity=40.3470715835141, Blast_Score=325, Evalue=9e-90, Organism=Saccharomyces cerevisiae, GI6319352, Length=385, Percent_Identity=37.6623376623377, Blast_Score=249, Evalue=7e-67, Organism=Saccharomyces cerevisiae, GI6319353, Length=116, Percent_Identity=38.7931034482759, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24641071, Length=479, Percent_Identity=40.2922755741127, Blast_Score=329, Evalue=2e-90, Organism=Drosophila melanogaster, GI24641073, Length=479, Percent_Identity=40.2922755741127, Blast_Score=329, Evalue=2e-90, Organism=Drosophila melanogaster, GI28571163, Length=437, Percent_Identity=40.9610983981693, Blast_Score=299, Evalue=4e-81,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 50666; Mature: 50666
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRQAITFDDVLLQPGASEVLPADVNVSTFLTKAIPLNIPLLSAAMDTVTEARLAIAMA CCCCHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QAGGIGVIHRNLTIEQQAGEVAMVKKYESGVVMNPITISPDATLGELREVKKRTGFSGIP CCCCEEEEEECEEEECCCCCEEEEEECCCCEEECCEEECCCCCHHHHHHHHHHCCCCCCC VVEKSGKVLGIVTNRDTRFADDLNEKVATLMTRNVVTAQMDMDPAEARRLLHKHRIERLV EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCEEE IVDHDGRCLGLLTVKDMDKAAVHPHAAKDAAGRLRVAAASTVGDAGFERTMALIEAGADA EEECCCCEEEEEEECCCCHHHCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCE IIIDTAHGHSISVAEAVTRAKKISNSVQIIAGNVATGEATKALIDAGADAVKVGIGPGSI EEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCH CTTRIVAGVGVPQLTAIEQCATAALASGVPIIADGGIKFSGDFAKALAAGASTAMMGSMF HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHCCCHHHHHHHHH AGTEEAPGEVFLYQGRSYKAYRGMGSLGAMARGSADRYFQKDAAAEKLVPEGIEGQVPFK CCCCCCCCCEEEEECCCCHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC GPVGAIIHQMVGGLRAAMGYVGAKDIAELHQKAEFVQITGAGLNESHVHDVMMTREAPNY CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHEECCCCCC SLSRG CCCCC >Mature Secondary Structure MKIRQAITFDDVLLQPGASEVLPADVNVSTFLTKAIPLNIPLLSAAMDTVTEARLAIAMA CCCCHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QAGGIGVIHRNLTIEQQAGEVAMVKKYESGVVMNPITISPDATLGELREVKKRTGFSGIP CCCCEEEEEECEEEECCCCCEEEEEECCCCEEECCEEECCCCCHHHHHHHHHHCCCCCCC VVEKSGKVLGIVTNRDTRFADDLNEKVATLMTRNVVTAQMDMDPAEARRLLHKHRIERLV EEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCEEE IVDHDGRCLGLLTVKDMDKAAVHPHAAKDAAGRLRVAAASTVGDAGFERTMALIEAGADA EEECCCCEEEEEEECCCCHHHCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCE IIIDTAHGHSISVAEAVTRAKKISNSVQIIAGNVATGEATKALIDAGADAVKVGIGPGSI EEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCH CTTRIVAGVGVPQLTAIEQCATAALASGVPIIADGGIKFSGDFAKALAAGASTAMMGSMF HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHCCCHHHHHHHHH AGTEEAPGEVFLYQGRSYKAYRGMGSLGAMARGSADRYFQKDAAAEKLVPEGIEGQVPFK CCCCCCCCCEEEEECCCCHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC GPVGAIIHQMVGGLRAAMGYVGAKDIAELHQKAEFVQITGAGLNESHVHDVMMTREAPNY CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHEECCCCCC SLSRG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA