| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800429
Identifier: 114800429
GI number: 114800429
Start: 2450042
End: 2451220
Strand: Reverse
Name: 114800429
Synonym: HNE_2350
Alternate gene names: NA
Gene position: 2451220-2450042 (Counterclockwise)
Preceding gene: 114800117
Following gene: 114800003
Centisome position: 66.16
GC content: 57.93
Gene sequence:
>1179_bases ATGCTGGCTGTTAACCATATTGATCCAATCGCACCTGAAACAACAACCAGGACTTGCGCAACGCGCGTATTTCCGCTTCT TTCTGGTGTGGGGGGAATGCGTAATACAAATTCAGCCGTGGGATCGAACGAGGAGTTTGATGCAATGCATCGCAGCCCGG CACTCAATGGCGGTTCGCCAACGATCCCGATTGACGAACTTTCAGCCAGCCTTTCCGACCCTGTTCTAGCCGCGCTGCTT CAAAGCAGCCGTGATTGCATCAAGGTGCTCGATCTCACTGGACGTATCCGGTACATGAACCCGATGGGCCTTTCCGCGCG GCAGCTGAGCGCGGATACGGATGTCATCGGCCGGCACTGGTGGGATCTCTGGCCTGAAGAATCCCATTCCATGGTGCAGG ACGCGACCGGCAAAGGCGCAAGCGGGGACTCCACAGATTTTCGGGGTTTTTGCCCCACCGCGCGCGGGCGGCCCAAATGG TGGGATGTGCGTATGGTTCCAATCCGGAACGGCGCTGGCGAAGTGACCGGAGTGCTCGTTGTCTCAAAGGATGTGACGGA CGCCGTTACCAATCGCAAGATGTACGACACCATCGCTCTGGAGATGCGCCACAGGCTGAAGAACGCTTTTGCGGTGGCCA GCGCGATTGCCAAGATCAGCGCGCGGCAGACGCCCGAGCATCAGCCCTTTGCAGAAGATCTCGTCAAACGCTTCTCTTCC CTCGCCGTGGCGCAGGGCAAGCTGGTGGACGCGGCTAGCGATTTTCCTCTGCGGGCGCTGGTTTCCGACCTCGTTGATGC AGCAGGTGTCAGTGAAGAAACAATCGATGTGTCGGGGCTGCCCGATTGCCTTGTGGATGAAGCGCAGATGCGGGTCATTG CGGTGGTGATTGGTGAATTGACCACGAACTCTCTGAAGTATGGGGCGCTGCGCAATGGCGGGGCCATTTACTGCCAGGGG CGCATTGAGGACGAATGGTTGCATCTGTCCTGGATCGAGCCTCTCGAGGATGCATCGGAAGGTCAGACCGAAACATCGTC ATCCACCAATACCGGGCTTGCGGTTATTCAGCGGATCGTGACATCGGCCGGTGGGCAGGTGTCGCGTGTCATGAACCAGG ATGGATTGAGAGTCGATTTCTCGCTGGTGCATCAGCAAGCCGACGCATCTTCAGACTGA
Upstream 100 bases:
>100_bases CAGGGGCCGCATCATAAAAATCCGCATAGAGAGCATTTTTGGTGTTTTCCGGGGGAGTTCTCCTCCTGAAAACAATGTGT CAGCCAGCGCGCCCCATGGT
Downstream 100 bases:
>100_bases ATTTTCTGCTGCCAGAATGGAAACCGCCACCCAGCAGGGCTGGGTGGCGGACAGGCGCCTTACGTTGGGGTGGGGGGACG CTGACGTGGCGCCTGCTGTT
Product: putative sensory box sensor histidine kinase
Products: NA
Alternate protein names: EL360-LOV-histidine kinase; EL360-LOV-HK [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSPTIPIDELSASLSDPVLAALL QSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHWWDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKW WDVRMVPIRNGAGEVTGVLVVSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGELTTNSLKYGALRNGGAIYCQG RIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIVTSAGGQVSRVMNQDGLRVDFSLVHQQADASSD
Sequences:
>Translated_392_residues MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSPTIPIDELSASLSDPVLAALL QSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHWWDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKW WDVRMVPIRNGAGEVTGVLVVSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGELTTNSLKYGALRNGGAIYCQG RIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIVTSAGGQVSRVMNQDGLRVDFSLVHQQADASSD >Mature_392_residues MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSPTIPIDELSASLSDPVLAALL QSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHWWDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKW WDVRMVPIRNGAGEVTGVLVVSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGELTTNSLKYGALRNGGAIYCQG RIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIVTSAGGQVSRVMNQDGLRVDFSLVHQQADASSD
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42246; Mature: 42246
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSP CEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC TIPIDELSASLSDPVLAALLQSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHW CCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHHH WDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKWWDVRMVPIRNGAGEVTGVLV HHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEE VSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGEL HHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH TTNSLKYGALRNGGAIYCQGRIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIV HCCCEEECEECCCCEEEEECCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHH TSAGGQVSRVMNQDGLRVDFSLVHQQADASSD HHCCCHHHHHHCCCCCEEHHHHHHHHCCCCCC >Mature Secondary Structure MLAVNHIDPIAPETTTRTCATRVFPLLSGVGGMRNTNSAVGSNEEFDAMHRSPALNGGSP CEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC TIPIDELSASLSDPVLAALLQSSRDCIKVLDLTGRIRYMNPMGLSARQLSADTDVIGRHW CCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHHH WDLWPEESHSMVQDATGKGASGDSTDFRGFCPTARGRPKWWDVRMVPIRNGAGEVTGVLV HHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEE VSKDVTDAVTNRKMYDTIALEMRHRLKNAFAVASAIAKISARQTPEHQPFAEDLVKRFSS EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LAVAQGKLVDAASDFPLRALVSDLVDAAGVSEETIDVSGLPDCLVDEAQMRVIAVVIGEL HHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH TTNSLKYGALRNGGAIYCQGRIEDEWLHLSWIEPLEDASEGQTETSSSTNTGLAVIQRIV HCCCEEECEECCCCEEEEECCCCCCEEEEEECCCHHCCCCCCCCCCCCCCHHHHHHHHHH TSAGGQVSRVMNQDGLRVDFSLVHQQADASSD HHCCCHHHHHHCCCCCEEHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA