| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800425
Identifier: 114800425
GI number: 114800425
Start: 1621148
End: 1622074
Strand: Direct
Name: 114800425
Synonym: HNE_1589
Alternate gene names: NA
Gene position: 1621148-1622074 (Clockwise)
Preceding gene: 114799597
Following gene: 114799339
Centisome position: 43.76
GC content: 57.39
Gene sequence:
>927_bases ATGACACTTGATCCCCGCCTGCCAGCGCTTCGCGCGCTCATCCTGAAAGATCAGATTGAACTGGTGCAGGGCGCCCAGGA AATGGCTCGCGCTATCCATGAGCGCCACCAAGGCGCAGTCCGCGGGCTTGTTTTCTATGGGTCGGCAATGCGCCAAGGCG AATTTGCGGACAAGATGTATGATTTCTATGTCATCGTAGACCGATACAAATCGGTCTACGGATCAGGTCTGAAGCGCTTT GGTTCATGGCTATTGCCGCCCGGCGTACATTTTCTGCAGATAACATATCCGGATGGAAGACGGCTTCGGAGCAAATACTC GATTGTATCGGAAAAGGCATTCCATCGGCGGTCGCGGGGTGGGGCTTTCGAAAGCATGCTATGGGCAAGGTTTGCGCAAC CTTCCGTGGTCGTATCAGAAGATCCCCAGGTTTATGCCGATCTGATCGACACACTTGCGCTTTCCTGTGTGCACTTTTCG AATCAAATTCGTCCGCTTATGTCGGGTATGACAGACCCACTTTCCCCGTGGGTGCGAGGGCTTAGTGAAAGCTATCGCAC AGAACTCCGTCCGGAACGGCCCGACGCGCGTGCGCGAGAGATTGTCGCACGCTTTGAGGCGCGCTATCGCAAGCTCTCCG AAATTCTGTTCGCGGGTGAACTGCAAACGCCGCCACGGCCGGGCCGTATAACTTCAGCATTGTGCCAGGCCCGCTGGATC ATGCGTCGGATTGTTGGAAAGCCCATGGGCGCGTTGCGTGTTCTGAAGGCGGCTGCCACCTTCGATGCCGGGCTGGACTA TATTCTGGAGAAGGTGGAAAGCCACTCAGGCGTTCGCCTTGAAGTCACCGAGGCCGAGCGCAGGCGGCCTTTGTTGCACG CGCCCTCTCTTGCCTGGCGGCTATACCGTGCCGGCGCGTTCCGCTGA
Upstream 100 bases:
>100_bases TGGCCTGTTCTGGCGCAATTGTTCTCGATGGGGAGTTGTTGCAACTGCCAGAAAATATCCCCATCACGATCAGTGCAACC AGCCCGCTCCGGTTTTTGAG
Downstream 100 bases:
>100_bases AAAGCAGCGCGAATTTGCGCTTATATCAGTGTGCGGAATGCGGCGATGATTGACGCGATTTCCGCTTCGGAGTGTGCGGC CGACACGCTGAGCCGCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTLDPRLPALRALILKDQIELVQGAQEMARAIHERHQGAVRGLVFYGSAMRQGEFADKMYDFYVIVDRYKSVYGSGLKRF GSWLLPPGVHFLQITYPDGRRLRSKYSIVSEKAFHRRSRGGAFESMLWARFAQPSVVVSEDPQVYADLIDTLALSCVHFS NQIRPLMSGMTDPLSPWVRGLSESYRTELRPERPDARAREIVARFEARYRKLSEILFAGELQTPPRPGRITSALCQARWI MRRIVGKPMGALRVLKAAATFDAGLDYILEKVESHSGVRLEVTEAERRRPLLHAPSLAWRLYRAGAFR
Sequences:
>Translated_308_residues MTLDPRLPALRALILKDQIELVQGAQEMARAIHERHQGAVRGLVFYGSAMRQGEFADKMYDFYVIVDRYKSVYGSGLKRF GSWLLPPGVHFLQITYPDGRRLRSKYSIVSEKAFHRRSRGGAFESMLWARFAQPSVVVSEDPQVYADLIDTLALSCVHFS NQIRPLMSGMTDPLSPWVRGLSESYRTELRPERPDARAREIVARFEARYRKLSEILFAGELQTPPRPGRITSALCQARWI MRRIVGKPMGALRVLKAAATFDAGLDYILEKVESHSGVRLEVTEAERRRPLLHAPSLAWRLYRAGAFR >Mature_307_residues TLDPRLPALRALILKDQIELVQGAQEMARAIHERHQGAVRGLVFYGSAMRQGEFADKMYDFYVIVDRYKSVYGSGLKRFG SWLLPPGVHFLQITYPDGRRLRSKYSIVSEKAFHRRSRGGAFESMLWARFAQPSVVVSEDPQVYADLIDTLALSCVHFSN QIRPLMSGMTDPLSPWVRGLSESYRTELRPERPDARAREIVARFEARYRKLSEILFAGELQTPPRPGRITSALCQARWIM RRIVGKPMGALRVLKAAATFDAGLDYILEKVESHSGVRLEVTEAERRRPLLHAPSLAWRLYRAGAFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35134; Mature: 35003
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDPRLPALRALILKDQIELVQGAQEMARAIHERHQGAVRGLVFYGSAMRQGEFADKMY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DFYVIVDRYKSVYGSGLKRFGSWLLPPGVHFLQITYPDGRRLRSKYSIVSEKAFHRRSRG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC GAFESMLWARFAQPSVVVSEDPQVYADLIDTLALSCVHFSNQIRPLMSGMTDPLSPWVRG CHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LSESYRTELRPERPDARAREIVARFEARYRKLSEILFAGELQTPPRPGRITSALCQARWI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH MRRIVGKPMGALRVLKAAATFDAGLDYILEKVESHSGVRLEVTEAERRRPLLHAPSLAWR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCHHHHH LYRAGAFR HHHCCCCC >Mature Secondary Structure TLDPRLPALRALILKDQIELVQGAQEMARAIHERHQGAVRGLVFYGSAMRQGEFADKMY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH DFYVIVDRYKSVYGSGLKRFGSWLLPPGVHFLQITYPDGRRLRSKYSIVSEKAFHRRSRG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC GAFESMLWARFAQPSVVVSEDPQVYADLIDTLALSCVHFSNQIRPLMSGMTDPLSPWVRG CHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LSESYRTELRPERPDARAREIVARFEARYRKLSEILFAGELQTPPRPGRITSALCQARWI HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH MRRIVGKPMGALRVLKAAATFDAGLDYILEKVESHSGVRLEVTEAERRRPLLHAPSLAWR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCHHHHH LYRAGAFR HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA