| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800321
Identifier: 114800321
GI number: 114800321
Start: 1070365
End: 1071147
Strand: Direct
Name: 114800321
Synonym: HNE_1061
Alternate gene names: NA
Gene position: 1070365-1071147 (Clockwise)
Preceding gene: 114799192
Following gene: 114799364
Centisome position: 28.89
GC content: 65.01
Gene sequence:
>783_bases ATGGACTATACAGCCGGCGCCATTGACCCCGCCCGCCCCTGGATTCGCGATGAGCGCGACGCGCCTGCCGAGATGAACTG GCGCAACACGCTGCTCAATCCCTTTGGCAAGACCTACAAGCTGCACTTCACGCGGGCCTGGACGTTCATGTTCCTGGGCC GGGTGTTGCTCTATATCGTGCCGAGCTTCATCGCGATGATTGCGGGCATTGCGGGGGTGAGCACCGATGGCCTGAACGCG CCGGTCAACCTTTTGCTGTTCTCTGTGCCGGCGGTGCTGTTGCCGTTTGCCGTGTTTACGCTGGTGACCGAATACACCTC CTTTGTGGTGCATATGCGCCGCCTGACAGAGGCGGGACGCTCGGCGTTCATGGCGGTGATCGTGCTGGTGCCGCTGGTGC TGGGGCTGATTGCCTACGCGCTGGGCACACAGGGCGGGGCGGCGCAGTATCGCCAGATGCATACGCCTGCCAACACCGAA GCGGTGGAAGCCAAGAAAGAGACCGAAGCCGGGGACGAGGGCGAAGACGCCGCCTCCAAAGATGGGCAGGCGGCAGCCGG GCCGCCGGCGCGTGATCCGCGCCGGGCCGCGATGATGGAAATGAGTGAGCGGGAGCTGGCGATGCAGGCCGGGATGGGGC TGGCGTTTCCGATCTGGTGGCTGGCCTCGTTCGGGGCGATGCTGTGGTCGCTGATGTATGTCGCGCGCCTGCCCAATGGC GGGCAGGGGCAGTTTCGCACGGGCAGTCACATGACGCCTGAGGAGATTGCGCGCGGGGTTTGA
Upstream 100 bases:
>100_bases CCTACCGCCTGCGCTCTGACCCCCAACCCAATCGCCACGGACCGCCGACACTGCGCGGGAACCGTCCTGACGCCCGCCCC TGACACGACGAGGATACGCC
Downstream 100 bases:
>100_bases GGGCTTTTGGGCGCTGCTGGGTTTGGCGGCTGTTGTATTTCTATTGAGAGCTGCCCCACCCGCTGATCGGGCAATCGCAG TGCGATTGCTTATCCTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MDYTAGAIDPARPWIRDERDAPAEMNWRNTLLNPFGKTYKLHFTRAWTFMFLGRVLLYIVPSFIAMIAGIAGVSTDGLNA PVNLLLFSVPAVLLPFAVFTLVTEYTSFVVHMRRLTEAGRSAFMAVIVLVPLVLGLIAYALGTQGGAAQYRQMHTPANTE AVEAKKETEAGDEGEDAASKDGQAAAGPPARDPRRAAMMEMSERELAMQAGMGLAFPIWWLASFGAMLWSLMYVARLPNG GQGQFRTGSHMTPEEIARGV
Sequences:
>Translated_260_residues MDYTAGAIDPARPWIRDERDAPAEMNWRNTLLNPFGKTYKLHFTRAWTFMFLGRVLLYIVPSFIAMIAGIAGVSTDGLNA PVNLLLFSVPAVLLPFAVFTLVTEYTSFVVHMRRLTEAGRSAFMAVIVLVPLVLGLIAYALGTQGGAAQYRQMHTPANTE AVEAKKETEAGDEGEDAASKDGQAAAGPPARDPRRAAMMEMSERELAMQAGMGLAFPIWWLASFGAMLWSLMYVARLPNG GQGQFRTGSHMTPEEIARGV >Mature_260_residues MDYTAGAIDPARPWIRDERDAPAEMNWRNTLLNPFGKTYKLHFTRAWTFMFLGRVLLYIVPSFIAMIAGIAGVSTDGLNA PVNLLLFSVPAVLLPFAVFTLVTEYTSFVVHMRRLTEAGRSAFMAVIVLVPLVLGLIAYALGTQGGAAQYRQMHTPANTE AVEAKKETEAGDEGEDAASKDGQAAAGPPARDPRRAAMMEMSERELAMQAGMGLAFPIWWLASFGAMLWSLMYVARLPNG GQGQFRTGSHMTPEEIARGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28373; Mature: 28373
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYTAGAIDPARPWIRDERDAPAEMNWRNTLLNPFGKTYKLHFTRAWTFMFLGRVLLYIV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHH PSFIAMIAGIAGVSTDGLNAPVNLLLFSVPAVLLPFAVFTLVTEYTSFVVHMRRLTEAGR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAFMAVIVLVPLVLGLIAYALGTQGGAAQYRQMHTPANTEAVEAKKETEAGDEGEDAASK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHCC DGQAAAGPPARDPRRAAMMEMSERELAMQAGMGLAFPIWWLASFGAMLWSLMYVARLPNG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GQGQFRTGSHMTPEEIARGV CCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MDYTAGAIDPARPWIRDERDAPAEMNWRNTLLNPFGKTYKLHFTRAWTFMFLGRVLLYIV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHH PSFIAMIAGIAGVSTDGLNAPVNLLLFSVPAVLLPFAVFTLVTEYTSFVVHMRRLTEAGR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAFMAVIVLVPLVLGLIAYALGTQGGAAQYRQMHTPANTEAVEAKKETEAGDEGEDAASK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHCC DGQAAAGPPARDPRRAAMMEMSERELAMQAGMGLAFPIWWLASFGAMLWSLMYVARLPNG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GQGQFRTGSHMTPEEIARGV CCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA