Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is uidR [C]

Identifier: 114800317

GI number: 114800317

Start: 2767979

End: 2768662

Strand: Direct

Name: uidR [C]

Synonym: HNE_2607

Alternate gene names: 114800317

Gene position: 2767979-2768662 (Clockwise)

Preceding gene: 114799324

Following gene: 114797415

Centisome position: 74.71

GC content: 62.57

Gene sequence:

>684_bases
ATGGCCGCCAAATCCACCTCTACAAAAGCCAATGGCAAATCCGCAACCCCTTCCAAAGGTGGCGCAAAGAACGGCGAAAA
GGCAACCGTCACAAAGCCTGAGGAGCCCATCCGCCGCCCCCGCGTGCGCGATGCCCGGCCGAAAATCGAGCGCGCGGCGC
TGGAGCTGTTTGTGACGGTCGGGGTGGACGCTGCCACCACACGGGAGATTGCCGAAAGCGCGCAGGTCTCCGAAGGCGCG
CTTTACCGCCACTACAAGGGCAAGGATGAACTCGCCCTTGCCCTGTTCATGGAAACGCACAATCGCCTCTCCGCGATGCT
GGCCGAAGCCCTGGGTGGCCAGGGCGGCCTTGATGAAAAGGTCCATGCCGCCGTCGCTGCCTATTGTTCTCTGGCAGACG
AGGATTTCCTTCTGTTCTCGTTCCACCTCGTCTCGCTGAACAAATACCTGCCCTATGACAAACGCCGCGCAGACGATCCG
GTTTCCATCACGGAAGGGATCATCATGGACCTGATGGACGCTGCCGCCATCCCTAAGGGCGACCCCGCCCTGAAGGCCGC
CATGGCGCTGGGCGTCGTCATGCAGGCGGGGCAAAACAAGATCTATAACCGCCTGCCCGGCCCACTCTCGCGCCACGCCC
CGGCGCTGGCCCGCGCTGTTCTGGCCGTTCTCAAGTCCAACTGA

Upstream 100 bases:

>100_bases
CTCAGACCAAAGATAAAAATTGATTAGTGAGCGATTGATCACTTGCTATTACTGCGCCCTCATGCTACATCCGGCCTGAA
CACACGGGAGCCCCTGCCTC

Downstream 100 bases:

>100_bases
TCGTTCCCTCTACGGAGCATATCCACATGCGCGGCACTCTCTTCCAGGTGGCCTATTGGGTCCTCTCGATCTTCTATGTC
CTCGTTTCACTGCCCTTCCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MAAKSTSTKANGKSATPSKGGAKNGEKATVTKPEEPIRRPRVRDARPKIERAALELFVTVGVDAATTREIAESAQVSEGA
LYRHYKGKDELALALFMETHNRLSAMLAEALGGQGGLDEKVHAAVAAYCSLADEDFLLFSFHLVSLNKYLPYDKRRADDP
VSITEGIIMDLMDAAAIPKGDPALKAAMALGVVMQAGQNKIYNRLPGPLSRHAPALARAVLAVLKSN

Sequences:

>Translated_227_residues
MAAKSTSTKANGKSATPSKGGAKNGEKATVTKPEEPIRRPRVRDARPKIERAALELFVTVGVDAATTREIAESAQVSEGA
LYRHYKGKDELALALFMETHNRLSAMLAEALGGQGGLDEKVHAAVAAYCSLADEDFLLFSFHLVSLNKYLPYDKRRADDP
VSITEGIIMDLMDAAAIPKGDPALKAAMALGVVMQAGQNKIYNRLPGPLSRHAPALARAVLAVLKSN
>Mature_226_residues
AAKSTSTKANGKSATPSKGGAKNGEKATVTKPEEPIRRPRVRDARPKIERAALELFVTVGVDAATTREIAESAQVSEGAL
YRHYKGKDELALALFMETHNRLSAMLAEALGGQGGLDEKVHAAVAAYCSLADEDFLLFSFHLVSLNKYLPYDKRRADDPV
SITEGIIMDLMDAAAIPKGDPALKAAMALGVVMQAGQNKIYNRLPGPLSRHAPALARAVLAVLKSN

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24237; Mature: 24106

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKSTSTKANGKSATPSKGGAKNGEKATVTKPEEPIRRPRVRDARPKIERAALELFVTV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHC
GVDAATTREIAESAQVSEGALYRHYKGKDELALALFMETHNRLSAMLAEALGGQGGLDEK
CCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
VHAAVAAYCSLADEDFLLFSFHLVSLNKYLPYDKRRADDPVSITEGIIMDLMDAAAIPKG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCC
DPALKAAMALGVVMQAGQNKIYNRLPGPLSRHAPALARAVLAVLKSN
CHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAKSTSTKANGKSATPSKGGAKNGEKATVTKPEEPIRRPRVRDARPKIERAALELFVTV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHC
GVDAATTREIAESAQVSEGALYRHYKGKDELALALFMETHNRLSAMLAEALGGQGGLDEK
CCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
VHAAVAAYCSLADEDFLLFSFHLVSLNKYLPYDKRRADDPVSITEGIIMDLMDAAAIPKG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCC
DPALKAAMALGVVMQAGQNKIYNRLPGPLSRHAPALARAVLAVLKSN
CHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA