| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is cysK [H]
Identifier: 114800279
GI number: 114800279
Start: 1449124
End: 1450131
Strand: Reverse
Name: cysK [H]
Synonym: HNE_1420
Alternate gene names: 114800279
Gene position: 1450131-1449124 (Counterclockwise)
Preceding gene: 114799535
Following gene: 114797517
Centisome position: 39.14
GC content: 63.99
Gene sequence:
>1008_bases ATGACCATTCACAGGTCCGTTATCGACCTCATCGGCAATACGCCGCTGCTCCGGCTCAATCGTGTGTCAGATGAGACCGG ATGCGAGATCCTGGGCAAGTGCGAGTTTCTCAATCCCGGCCAGTCGGTGAAGGATCGCCCGGCGCTGGGCATCATCCGTG AGGCCGAAGAGTCCGGCGCGCTGAAGCCCGGCGGCACCATCGTGGAAGGCACCGCCGGCAATACCGGCATTGGCCTGGCG CTGGTCGGCAAGGCGCTGGGTTACCGGGTGGTGATCGTCATGCCGCGCACACAGAGCCAGGAGAAGAAGGACGCGATCCG CCTTCTGGGCGCTGAGCTGATCGAGGTGGACGCGGTGCCCTACGCCAACCCCAACAACTATGTGCGCTATTCCGGGCGCC TGGCCGAGGAGCTGGCCGCGAGCGAGCCCAATGGCGCGATCTGGGCAAACCAGTTCGACAACCAGGCCAACCGCCGCGCG CACTACAACACCACCGCGAAGGAAATCTGGGAGCAGACGAGCGGCAAGGTGGACGGGTTCATCTGCGCGGTGGGCTCCGG CGGCACGCTGGGCGGGGTGGCGCTGGGCCTGAAGGAGCGCAACCCGAAGATCACCATCGGCCTGGCCGACCCCGGCGGCG CGGCGCTCTATTCCTATTACACGACCGGTGAGCTGAAAGCCGAAGGCACTTCGATCACCGAGGGCATTGGCCAGGGGCGC ATTACGGCAAACCTGGAAGGCATTCCGGTCGACAAGGCGTGGCGCATCAATGATGATGAGGCGCTGGGCTATATCTTCGG CCTGGTCGAGGATGAGGGGCTGTGCCTTGGCGGATCATCGGGCGTGAATGTGGCGGGGGCTGTGCATCTCGCCCGTGAGC TGGGGCCGGGGCACACGATCGTCACGATCCTCTGTGACTACGGCAACCGGTATCAGACGAAATTGTTCAACCCGGAATTC CTGCGCTCCAAAGGCCTGCCGGTTCCGTCCTGGATGGAGGCGAAATAA
Upstream 100 bases:
>100_bases GCCGGCCCGGTGGATCAGTTTGGAGGTGCTGACCGATTGAACCTGCCCGCGCGGGCGCGTAGCCTGAGACAAACGCACAA CACCAGAATCGAGTTCCCTT
Downstream 100 bases:
>100_bases TGAGCGAGAGCGGCGACCCGCTGGTCAGTGCAGACTGGCTGATGGCGAATATCAGCGCGCCGGATGTGCGCATTGTGGAC GCGACCTGGTTTGCGCCCTG
Product: cysteine synthase A
Products: NA
Alternate protein names: CSase; O-acetylserine (thiol)-lyase; OAS-TL; O-acetylserine sulfhydrylase [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTIHRSVIDLIGNTPLLRLNRVSDETGCEILGKCEFLNPGQSVKDRPALGIIREAEESGALKPGGTIVEGTAGNTGIGLA LVGKALGYRVVIVMPRTQSQEKKDAIRLLGAELIEVDAVPYANPNNYVRYSGRLAEELAASEPNGAIWANQFDNQANRRA HYNTTAKEIWEQTSGKVDGFICAVGSGGTLGGVALGLKERNPKITIGLADPGGAALYSYYTTGELKAEGTSITEGIGQGR ITANLEGIPVDKAWRINDDEALGYIFGLVEDEGLCLGGSSGVNVAGAVHLARELGPGHTIVTILCDYGNRYQTKLFNPEF LRSKGLPVPSWMEAK
Sequences:
>Translated_335_residues MTIHRSVIDLIGNTPLLRLNRVSDETGCEILGKCEFLNPGQSVKDRPALGIIREAEESGALKPGGTIVEGTAGNTGIGLA LVGKALGYRVVIVMPRTQSQEKKDAIRLLGAELIEVDAVPYANPNNYVRYSGRLAEELAASEPNGAIWANQFDNQANRRA HYNTTAKEIWEQTSGKVDGFICAVGSGGTLGGVALGLKERNPKITIGLADPGGAALYSYYTTGELKAEGTSITEGIGQGR ITANLEGIPVDKAWRINDDEALGYIFGLVEDEGLCLGGSSGVNVAGAVHLARELGPGHTIVTILCDYGNRYQTKLFNPEF LRSKGLPVPSWMEAK >Mature_334_residues TIHRSVIDLIGNTPLLRLNRVSDETGCEILGKCEFLNPGQSVKDRPALGIIREAEESGALKPGGTIVEGTAGNTGIGLAL VGKALGYRVVIVMPRTQSQEKKDAIRLLGAELIEVDAVPYANPNNYVRYSGRLAEELAASEPNGAIWANQFDNQANRRAH YNTTAKEIWEQTSGKVDGFICAVGSGGTLGGVALGLKERNPKITIGLADPGGAALYSYYTTGELKAEGTSITEGIGQGRI TANLEGIPVDKAWRINDDEALGYIFGLVEDEGLCLGGSSGVNVAGAVHLARELGPGHTIVTILCDYGNRYQTKLFNPEFL RSKGLPVPSWMEAK
Specific function: Two Cysteine Synthase Enzymes Are Found. Both Catalyze The Same Reaction. Cysteine Synthase B Can Also Use Thiosulfate In Place Of Sulfide To Give Cysteine Thiosulfonate As A Product. [C]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=323, Percent_Identity=42.4148606811146, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI295821200, Length=323, Percent_Identity=42.4148606811146, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI4557415, Length=323, Percent_Identity=42.4148606811146, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI11345492, Length=301, Percent_Identity=26.9102990033223, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI2367138, Length=313, Percent_Identity=37.6996805111821, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1788754, Length=315, Percent_Identity=40.3174603174603, Blast_Score=166, Evalue=3e-42, Organism=Caenorhabditis elegans, GI17535051, Length=314, Percent_Identity=39.8089171974522, Blast_Score=199, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17562970, Length=315, Percent_Identity=40.3174603174603, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI32566674, Length=305, Percent_Identity=40.9836065573771, Blast_Score=188, Evalue=3e-48, Organism=Caenorhabditis elegans, GI115535073, Length=306, Percent_Identity=38.2352941176471, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17534315, Length=331, Percent_Identity=35.6495468277946, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17561720, Length=329, Percent_Identity=35.8662613981763, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI25147552, Length=330, Percent_Identity=32.1212121212121, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI32566672, Length=221, Percent_Identity=37.10407239819, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71996324, Length=367, Percent_Identity=27.7929155313352, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6321449, Length=329, Percent_Identity=41.3373860182371, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321594, Length=335, Percent_Identity=34.6268656716418, Blast_Score=179, Evalue=5e-46, Organism=Drosophila melanogaster, GI24643623, Length=330, Percent_Identity=37.2727272727273, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI20129101, Length=330, Percent_Identity=37.2727272727273, Blast_Score=179, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 35653; Mature: 35522
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00901 CYS_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHRSVIDLIGNTPLLRLNRVSDETGCEILGKCEFLNPGQSVKDRPALGIIREAEESGA CCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEHHHCCC LKPGGTIVEGTAGNTGIGLALVGKALGYRVVIVMPRTQSQEKKDAIRLLGAELIEVDAVP CCCCCEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCHHEEECCCC YANPNNYVRYSGRLAEELAASEPNGAIWANQFDNQANRRAHYNTTAKEIWEQTSGKVDGF CCCCCCEEEECCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEE ICAVGSGGTLGGVALGLKERNPKITIGLADPGGAALYSYYTTGELKAEGTSITEGIGQGR EEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEECCEEEECCCHHHHCCCCCE ITANLEGIPVDKAWRINDDEALGYIFGLVEDEGLCLGGSSGVNVAGAVHLARELGPGHTI EEEECCCCCCCCEEECCCCCCEEEEEEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCEE VTILCDYGNRYQTKLFNPEFLRSKGLPVPSWMEAK EEEEECCCCCEEEEECCHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TIHRSVIDLIGNTPLLRLNRVSDETGCEILGKCEFLNPGQSVKDRPALGIIREAEESGA CCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEHHHCCC LKPGGTIVEGTAGNTGIGLALVGKALGYRVVIVMPRTQSQEKKDAIRLLGAELIEVDAVP CCCCCEEEECCCCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHCCHHEEECCCC YANPNNYVRYSGRLAEELAASEPNGAIWANQFDNQANRRAHYNTTAKEIWEQTSGKVDGF CCCCCCEEEECCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEE ICAVGSGGTLGGVALGLKERNPKITIGLADPGGAALYSYYTTGELKAEGTSITEGIGQGR EEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEECCEEEECCCHHHHCCCCCE ITANLEGIPVDKAWRINDDEALGYIFGLVEDEGLCLGGSSGVNVAGAVHLARELGPGHTI EEEECCCCCCCCEEECCCCCCEEEEEEEECCCCEEECCCCCCCHHHHHHHHHHCCCCCEE VTILCDYGNRYQTKLFNPEFLRSKGLPVPSWMEAK EEEEECCCCCEEEEECCHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA