Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114800261

Identifier: 114800261

GI number: 114800261

Start: 492795

End: 494309

Strand: Reverse

Name: 114800261

Synonym: HNE_0502

Alternate gene names: NA

Gene position: 494309-492795 (Counterclockwise)

Preceding gene: 114798720

Following gene: 114797138

Centisome position: 13.34

GC content: 62.84

Gene sequence:

>1515_bases
GTGCCAAAACCCTGTCTTAAGGCAATTCCATGCCCCACAATGGGCGTTCTGCACAGTGCAAGTTGCACACCACCCCTTGA
TCTTTTTTCCCCTGGCACGCTCTATGGGCAGCCTCCCCCACAGTCTGCCCAAAAGGGTAAAATCGTCGGAATGGCCCGCC
AACGGAAAGTACAATCCCGCAAAGCGGGCTGGATGCTGGCGGTGATGTTCAATTCCCTGCTCATCCTTCTGCCTGTGATC
GGCGCGCGCGCCGTGGCAAATGCCTATGATCAGGACCTCACCTCCCGCGAAGGTGCCGCCGAAGCGCTCCAGCATGCTCA
CGAAAAGTTGTTGGATGAGCTGACAACAATCGGCCCGCGCGACGAGGACAGCAAGCTTCCCTACTGGCAGGACCGAATCA
TTGCCGAGCTGGACGCACGCAACATGCCCGCCGTGCGCGGCTATCTCCTGGCCGCCCCTCAGATTCTCGGCCGCGAGCTC
GGCGAACAGATCCGTGTGCGGGCAGAAGCCGAAGTTACCGGAACCCCGGACGAGCGCTTGATTCGCGCCGCTATGCAGAA
GCTGCCTGAAACGATCGCCGCCCGGATCATGGAAACGGAACGCTACAATCCGCCCGCGGCCAGCCCGGAGATAGCGCCGC
CACTGGAGGAGGCTCCGATCACCGCAGAAGAAGCCGCCCCGGCCGATAGCTCTGAAGCGGTGCCGGATGAGACTGCCACC
GCTGAAGCCGATGACGCCGCCCAGGCCGCTGCCGATCCCGCTGCGGTCGAGGAACCTGTCGTCCTTCAGGCCAATGTCCG
CAGCGAAGACGAGCGGCGTTTCCAGACACTTGGCGATTATGCCGACCTCTCCAACATGTCTCAGAACTGGATCGAGGGAG
ATCGCTCCGATGAGCTGGTCGTCAAGCTGACCGGCCTCGGGCTCGTCCAGCAGGATTACAGCGACGGCCTGTCAGATGCA
GCTGCCTTGTCTGTCTCAATCCTGAAGTCCGCCCGCCGGTCCCAGCGCCTGACACCCAGCTTCTCTGCTTATCTCGAAGA
TCACGTTGACGCCGCCCTGCCCGATGAAGCGCTGGAACCGGCGCTCGAAGAGGCCTTCAGCGATCTGGCCACCACCGAAA
TGCGGGCCGAGCGGGTGCGCACCGCCTATGCAGCCTCCATCGACCAGTCCGGCCTTGGCCCTCTGGAAGGGGATCTCGAC
CAGATTCAACGCCTTGCCGCGCAGACGAGCCCTGGCGGCGCGCTTACGATCCTGGCGGTAATTGAAGACGGCACGGATCT
TCAGCGCGCGCGCCTGCTGGCCGAAGCGGGCGGCGAACGCTTCATCGTTCTGGTTCGGGAGCGGGGTAAGGAGTCTCTGA
AGATCGCCGACGCCGGCATCAGCTGGAACCGCAATACCGTGCTGGAAATCATGAGCCTGACGGCTGCCGGCATGCTGCTG
TTCTGGGTGATGCTCTCAACCGTCCGGCTCTACATCAAGCTGCCAAAGCCGCGGGCCGAACCGCAGGGCACCTGA

Upstream 100 bases:

>100_bases
CTTCTCTCGTTTGCGTGCCATATAGAGCGGACCTCGATTCACTGCAATCTCCGAGACTGCGGTAGTAAATCCTGCAATAT
CAGACAATTACGACAATAAC

Downstream 100 bases:

>100_bases
CAAGCCTCAGCCGATATTAAACGCGCCGCGGATGCCATCGAGGATGAGCTGAGCCGAAAGCGCCGCCAGGATAACCCCGA
GAATCCGCGTCAGCGCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MPKPCLKAIPCPTMGVLHSASCTPPLDLFSPGTLYGQPPPQSAQKGKIVGMARQRKVQSRKAGWMLAVMFNSLLILLPVI
GARAVANAYDQDLTSREGAAEALQHAHEKLLDELTTIGPRDEDSKLPYWQDRIIAELDARNMPAVRGYLLAAPQILGREL
GEQIRVRAEAEVTGTPDERLIRAAMQKLPETIAARIMETERYNPPAASPEIAPPLEEAPITAEEAAPADSSEAVPDETAT
AEADDAAQAAADPAAVEEPVVLQANVRSEDERRFQTLGDYADLSNMSQNWIEGDRSDELVVKLTGLGLVQQDYSDGLSDA
AALSVSILKSARRSQRLTPSFSAYLEDHVDAALPDEALEPALEEAFSDLATTEMRAERVRTAYAASIDQSGLGPLEGDLD
QIQRLAAQTSPGGALTILAVIEDGTDLQRARLLAEAGGERFIVLVRERGKESLKIADAGISWNRNTVLEIMSLTAAGMLL
FWVMLSTVRLYIKLPKPRAEPQGT

Sequences:

>Translated_504_residues
MPKPCLKAIPCPTMGVLHSASCTPPLDLFSPGTLYGQPPPQSAQKGKIVGMARQRKVQSRKAGWMLAVMFNSLLILLPVI
GARAVANAYDQDLTSREGAAEALQHAHEKLLDELTTIGPRDEDSKLPYWQDRIIAELDARNMPAVRGYLLAAPQILGREL
GEQIRVRAEAEVTGTPDERLIRAAMQKLPETIAARIMETERYNPPAASPEIAPPLEEAPITAEEAAPADSSEAVPDETAT
AEADDAAQAAADPAAVEEPVVLQANVRSEDERRFQTLGDYADLSNMSQNWIEGDRSDELVVKLTGLGLVQQDYSDGLSDA
AALSVSILKSARRSQRLTPSFSAYLEDHVDAALPDEALEPALEEAFSDLATTEMRAERVRTAYAASIDQSGLGPLEGDLD
QIQRLAAQTSPGGALTILAVIEDGTDLQRARLLAEAGGERFIVLVRERGKESLKIADAGISWNRNTVLEIMSLTAAGMLL
FWVMLSTVRLYIKLPKPRAEPQGT
>Mature_503_residues
PKPCLKAIPCPTMGVLHSASCTPPLDLFSPGTLYGQPPPQSAQKGKIVGMARQRKVQSRKAGWMLAVMFNSLLILLPVIG
ARAVANAYDQDLTSREGAAEALQHAHEKLLDELTTIGPRDEDSKLPYWQDRIIAELDARNMPAVRGYLLAAPQILGRELG
EQIRVRAEAEVTGTPDERLIRAAMQKLPETIAARIMETERYNPPAASPEIAPPLEEAPITAEEAAPADSSEAVPDETATA
EADDAAQAAADPAAVEEPVVLQANVRSEDERRFQTLGDYADLSNMSQNWIEGDRSDELVVKLTGLGLVQQDYSDGLSDAA
ALSVSILKSARRSQRLTPSFSAYLEDHVDAALPDEALEPALEEAFSDLATTEMRAERVRTAYAASIDQSGLGPLEGDLDQ
IQRLAAQTSPGGALTILAVIEDGTDLQRARLLAEAGGERFIVLVRERGKESLKIADAGISWNRNTVLEIMSLTAAGMLLF
WVMLSTVRLYIKLPKPRAEPQGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54498; Mature: 54367

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPCLKAIPCPTMGVLHSASCTPPLDLFSPGTLYGQPPPQSAQKGKIVGMARQRKVQSR
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH
KAGWMLAVMFNSLLILLPVIGARAVANAYDQDLTSREGAAEALQHAHEKLLDELTTIGPR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
DEDSKLPYWQDRIIAELDARNMPAVRGYLLAAPQILGRELGEQIRVRAEAEVTGTPDERL
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHH
IRAAMQKLPETIAARIMETERYNPPAASPEIAPPLEEAPITAEEAAPADSSEAVPDETAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCC
AEADDAAQAAADPAAVEEPVVLQANVRSEDERRFQTLGDYADLSNMSQNWIEGDRSDELV
CCCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
VKLTGLGLVQQDYSDGLSDAAALSVSILKSARRSQRLTPSFSAYLEDHVDAALPDEALEP
EEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH
ALEEAFSDLATTEMRAERVRTAYAASIDQSGLGPLEGDLDQIQRLAAQTSPGGALTILAV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEE
IEDGTDLQRARLLAEAGGERFIVLVRERGKESLKIADAGISWNRNTVLEIMSLTAAGMLL
ECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
FWVMLSTVRLYIKLPKPRAEPQGT
HHHHHHHHHEEEECCCCCCCCCCC
>Mature Secondary Structure 
PKPCLKAIPCPTMGVLHSASCTPPLDLFSPGTLYGQPPPQSAQKGKIVGMARQRKVQSR
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH
KAGWMLAVMFNSLLILLPVIGARAVANAYDQDLTSREGAAEALQHAHEKLLDELTTIGPR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
DEDSKLPYWQDRIIAELDARNMPAVRGYLLAAPQILGRELGEQIRVRAEAEVTGTPDERL
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHH
IRAAMQKLPETIAARIMETERYNPPAASPEIAPPLEEAPITAEEAAPADSSEAVPDETAT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCCCCC
AEADDAAQAAADPAAVEEPVVLQANVRSEDERRFQTLGDYADLSNMSQNWIEGDRSDELV
CCCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
VKLTGLGLVQQDYSDGLSDAAALSVSILKSARRSQRLTPSFSAYLEDHVDAALPDEALEP
EEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH
ALEEAFSDLATTEMRAERVRTAYAASIDQSGLGPLEGDLDQIQRLAAQTSPGGALTILAV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEE
IEDGTDLQRARLLAEAGGERFIVLVRERGKESLKIADAGISWNRNTVLEIMSLTAAGMLL
ECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
FWVMLSTVRLYIKLPKPRAEPQGT
HHHHHHHHHEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA