| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114800231
Identifier: 114800231
GI number: 114800231
Start: 3347132
End: 3348043
Strand: Direct
Name: 114800231
Synonym: HNE_3171
Alternate gene names: NA
Gene position: 3347132-3348043 (Clockwise)
Preceding gene: 114800275
Following gene: 114797726
Centisome position: 90.34
GC content: 66.23
Gene sequence:
>912_bases ATGTCCCCCGCCGCTCCTCCGCAGATTTTCGACCGCGACAAGCTCAAAGCTCGCCGGCAGACCTTTGCCCGGCACTTTCA GGACTATGACTTCCTGCGCGCCCGCGTGTCGAGCGATCTTGAAACCCGCGTGGCCGACACGCCGCGCATTTTCGAGGCCG CACTGGAACTGGGCGGCGCCAATGGCGGTCTCTCCGAGACACTTCTGGGACAAAACAGGACAAAATCGGTCACCATTGCC GACACGGCAGACGCGTTTCTCGATGCCGCCCGCGCACGCGGACTAGACGCCGTCTTTGCCGATCCCGAAGCGCTGCCTTT TGAAGCGGAACGGTTCGACCTGATTGTCTCTCCCCTCATTCTGCATTGGGTGAACGATCTTCCAGGCGCCCTGGTGCAGA TCCGCCGCGCGCTCAAACCCGATGGCCTGTTCCTCGGCGCCCTCTTCGGCGCGGGCACGCTGGCAGAACTGCGCGAAGTG CTCAGCGAGGCGGAAAGCGAGCTGATGGGCGGTCTCAGCCCGCGCCTTTCCCCGCTTCCGGGGTTGCGGGACATGGCAAG CCTGCTCCAGCGCGCTGGCTTTGCCCTGCCGGTGGTTGACCGGGATACCGTGACCGTCCGCTACAGGGAGCCTGAAGGCC TCTTCCGCGATCTCAAAGGGATGGGCGAACGCGCCGCCTTCGCGCGGGGGGTCGGCCGCCCCCTGCCCCGGCGGGTGCTC GCCAGGGCCATGGCACTTTACCGGGAACGGTTCTCTGATCCCGATGGCCGCGTGCGCGCCACCTTCGAGATCGTGCACCT GTCAGGCTGGGCGCCGGCGCCGGGCCAGCCAAAGCCGCTGAGACCGGGCAGCGCAAAGGCCAGCATGGCCGACGCGGTGA AGCGGGCGGGACAATCTGGAAAAGATAGCTGA
Upstream 100 bases:
>100_bases CCGGTCTCCGCTGATCAGGGACCGCGGCGGCCACAGGAAATCCCGCGTCCGGCGGAATAGGCCCTTGGCCGCAAGCCTGC CAGCCTTCATATCCGCGTCC
Downstream 100 bases:
>100_bases GGCAGGCTCAGGCCTGGACGAGGTTATCCTCGACCGTCTGGTAGATTTCGTTATTTGCGTCCGCAAAAGCCGTCACGCCG CCGATAATGGCAAGCACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSPAAPPQIFDRDKLKARRQTFARHFQDYDFLRARVSSDLETRVADTPRIFEAALELGGANGGLSETLLGQNRTKSVTIA DTADAFLDAARARGLDAVFADPEALPFEAERFDLIVSPLILHWVNDLPGALVQIRRALKPDGLFLGALFGAGTLAELREV LSEAESELMGGLSPRLSPLPGLRDMASLLQRAGFALPVVDRDTVTVRYREPEGLFRDLKGMGERAAFARGVGRPLPRRVL ARAMALYRERFSDPDGRVRATFEIVHLSGWAPAPGQPKPLRPGSAKASMADAVKRAGQSGKDS
Sequences:
>Translated_303_residues MSPAAPPQIFDRDKLKARRQTFARHFQDYDFLRARVSSDLETRVADTPRIFEAALELGGANGGLSETLLGQNRTKSVTIA DTADAFLDAARARGLDAVFADPEALPFEAERFDLIVSPLILHWVNDLPGALVQIRRALKPDGLFLGALFGAGTLAELREV LSEAESELMGGLSPRLSPLPGLRDMASLLQRAGFALPVVDRDTVTVRYREPEGLFRDLKGMGERAAFARGVGRPLPRRVL ARAMALYRERFSDPDGRVRATFEIVHLSGWAPAPGQPKPLRPGSAKASMADAVKRAGQSGKDS >Mature_302_residues SPAAPPQIFDRDKLKARRQTFARHFQDYDFLRARVSSDLETRVADTPRIFEAALELGGANGGLSETLLGQNRTKSVTIAD TADAFLDAARARGLDAVFADPEALPFEAERFDLIVSPLILHWVNDLPGALVQIRRALKPDGLFLGALFGAGTLAELREVL SEAESELMGGLSPRLSPLPGLRDMASLLQRAGFALPVVDRDTVTVRYREPEGLFRDLKGMGERAAFARGVGRPLPRRVLA RAMALYRERFSDPDGRVRATFEIVHLSGWAPAPGQPKPLRPGSAKASMADAVKRAGQSGKDS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40018642, Length=292, Percent_Identity=41.4383561643836, Blast_Score=195, Evalue=4e-50, Organism=Homo sapiens, GI86792933, Length=290, Percent_Identity=36.551724137931, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17535003, Length=294, Percent_Identity=30.952380952381, Blast_Score=140, Evalue=6e-34, Organism=Drosophila melanogaster, GI19922210, Length=301, Percent_Identity=39.8671096345515, Blast_Score=211, Evalue=4e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 32967; Mature: 32836
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPAAPPQIFDRDKLKARRQTFARHFQDYDFLRARVSSDLETRVADTPRIFEAALELGGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC NGGLSETLLGQNRTKSVTIADTADAFLDAARARGLDAVFADPEALPFEAERFDLIVSPLI CCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH LHWVNDLPGALVQIRRALKPDGLFLGALFGAGTLAELREVLSEAESELMGGLSPRLSPLP HHHHHHCCHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC GLRDMASLLQRAGFALPVVDRDTVTVRYREPEGLFRDLKGMGERAAFARGVGRPLPRRVL CHHHHHHHHHHCCCCCEEECCCEEEEEEECCHHHHHHHHCCCHHHHHHHHCCCCCHHHHH ARAMALYRERFSDPDGRVRATFEIVHLSGWAPAPGQPKPLRPGSAKASMADAVKRAGQSG HHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC KDS CCC >Mature Secondary Structure SPAAPPQIFDRDKLKARRQTFARHFQDYDFLRARVSSDLETRVADTPRIFEAALELGGA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC NGGLSETLLGQNRTKSVTIADTADAFLDAARARGLDAVFADPEALPFEAERFDLIVSPLI CCCHHHHHHCCCCCCEEEEECHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH LHWVNDLPGALVQIRRALKPDGLFLGALFGAGTLAELREVLSEAESELMGGLSPRLSPLP HHHHHHCCHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC GLRDMASLLQRAGFALPVVDRDTVTVRYREPEGLFRDLKGMGERAAFARGVGRPLPRRVL CHHHHHHHHHHCCCCCEEECCCEEEEEEECCHHHHHHHHCCCHHHHHHHHCCCCCHHHHH ARAMALYRERFSDPDGRVRATFEIVHLSGWAPAPGQPKPLRPGSAKASMADAVKRAGQSG HHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC KDS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]