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The map label for this gene is msrB1 [H]

Identifier: 114800218

GI number: 114800218

Start: 108400

End: 108900

Strand: Direct

Name: msrB1 [H]

Synonym: HNE_0120

Alternate gene names: 114800218

Gene position: 108400-108900 (Clockwise)

Preceding gene: 114799976

Following gene: 114800450

Centisome position: 2.93

GC content: 62.28

Gene sequence:

>501_bases
ATGTTTACCCGCCGATTGTTCCTTGCTTCCAGCGCGCTGGGGCTTGCCGCCTGCACCGCCGCGTCTGCCAAGGATCTTTC
GAAGAATACTGAGACAGCCGGATATGCAGGCGATGAATGGCGCCAGCTCTCGGAAGCCGATTGGAAGGCGCGGCTGTCGC
CGGCCGCGTATGAAGTCTTGCGCGAGCATGGAACGGAGCGGCCGTTCAGCTCGCCGCTGGACAAGGAAACGCGCGCGGGC
ATGTATCATTGCGCGGGCTGTGATCTGGCGCTGTTTTCCTCGGAGGCCAAATTTGATTCCGGCACAGGCTGGCCAAGCTT
CTGGGAAGCCTTGCCGGGCGCCATGGGTATGAGTGTTGACCGGCGGCTGTTTTATCCCCGTGATGAATATCACTGCGCGC
GCTGCCTTGGGCATCAGGGGCATGTGTTCGATGACGGCCCGGCGCCGACGGGCAAGCGCTGGTGCAACAATGGTGTGGCG
CTGACCTTCAAGCCCGCCTGA

Upstream 100 bases:

>100_bases
CAGGCCGATTCTTTTGAGCGTGTCAGAGGGGGCGTGTTCACGCGGCGTTGATTTGAACCGATGGGGGGGATGTGGCGTAT
AACGCTGTATGAGCCAAAAC

Downstream 100 bases:

>100_bases
GCGCCTGAATGAGGCGGACGTGAAAAGCCCCTCTCTCGTTTCCGGGAGAGGGGCTTTTGCGTGTGTCAGTAGAAGATCGC
CGCCGCGAAGAAGGCGAAGA

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MFTRRLFLASSALGLAACTAASAKDLSKNTETAGYAGDEWRQLSEADWKARLSPAAYEVLREHGTERPFSSPLDKETRAG
MYHCAGCDLALFSSEAKFDSGTGWPSFWEALPGAMGMSVDRRLFYPRDEYHCARCLGHQGHVFDDGPAPTGKRWCNNGVA
LTFKPA

Sequences:

>Translated_166_residues
MFTRRLFLASSALGLAACTAASAKDLSKNTETAGYAGDEWRQLSEADWKARLSPAAYEVLREHGTERPFSSPLDKETRAG
MYHCAGCDLALFSSEAKFDSGTGWPSFWEALPGAMGMSVDRRLFYPRDEYHCARCLGHQGHVFDDGPAPTGKRWCNNGVA
LTFKPA
>Mature_166_residues
MFTRRLFLASSALGLAACTAASAKDLSKNTETAGYAGDEWRQLSEADWKARLSPAAYEVLREHGTERPFSSPLDKETRAG
MYHCAGCDLALFSSEAKFDSGTGWPSFWEALPGAMGMSVDRRLFYPRDEYHCARCLGHQGHVFDDGPAPTGKRWCNNGVA
LTFKPA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI117606353, Length=132, Percent_Identity=48.4848484848485, Blast_Score=120, Evalue=4e-28,
Organism=Homo sapiens, GI301336164, Length=125, Percent_Identity=44, Blast_Score=113, Evalue=7e-26,
Organism=Homo sapiens, GI301336162, Length=125, Percent_Identity=44, Blast_Score=113, Evalue=7e-26,
Organism=Homo sapiens, GI73089054, Length=125, Percent_Identity=44, Blast_Score=113, Evalue=7e-26,
Organism=Homo sapiens, GI37620216, Length=125, Percent_Identity=44, Blast_Score=113, Evalue=1e-25,
Organism=Escherichia coli, GI1788077, Length=121, Percent_Identity=43.801652892562, Blast_Score=104, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17553450, Length=127, Percent_Identity=38.5826771653543, Blast_Score=92, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI115532676, Length=127, Percent_Identity=38.5826771653543, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6319816, Length=128, Percent_Identity=40.625, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI45553335, Length=130, Percent_Identity=43.0769230769231, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21356369, Length=130, Percent_Identity=43.0769230769231, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24645799, Length=130, Percent_Identity=43.0769230769231, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI221378662, Length=134, Percent_Identity=38.8059701492537, Blast_Score=113, Evalue=5e-26,
Organism=Drosophila melanogaster, GI221378664, Length=128, Percent_Identity=41.40625, Blast_Score=111, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24645804, Length=138, Percent_Identity=39.8550724637681, Blast_Score=111, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24645801, Length=138, Percent_Identity=39.8550724637681, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 18232; Mature: 18232

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTRRLFLASSALGLAACTAASAKDLSKNTETAGYAGDEWRQLSEADWKARLSPAAYEVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
REHGTERPFSSPLDKETRAGMYHCAGCDLALFSSEAKFDSGTGWPSFWEALPGAMGMSVD
HHCCCCCCCCCCCCCHHHCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCC
RRLFYPRDEYHCARCLGHQGHVFDDGPAPTGKRWCNNGVALTFKPA
CEECCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHCCCCEEEEECC
>Mature Secondary Structure
MFTRRLFLASSALGLAACTAASAKDLSKNTETAGYAGDEWRQLSEADWKARLSPAAYEVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
REHGTERPFSSPLDKETRAGMYHCAGCDLALFSSEAKFDSGTGWPSFWEALPGAMGMSVD
HHCCCCCCCCCCCCCHHHCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCC
RRLFYPRDEYHCARCLGHQGHVFDDGPAPTGKRWCNNGVALTFKPA
CEECCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA