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The map label for this gene is 114800207

Identifier: 114800207

GI number: 114800207

Start: 2646955

End: 2647659

Strand: Reverse

Name: 114800207

Synonym: HNE_2511

Alternate gene names: NA

Gene position: 2647659-2646955 (Counterclockwise)

Preceding gene: 114797341

Following gene: 114798435

Centisome position: 71.46

GC content: 53.19

Gene sequence:

>705_bases
ATGGCCATATCACCATTTCGCTACTTCAAGACCTCGTCTGAGATCATCCAGCTTGGCGTGCTGATGTATGTCCGATTTCC
GCTTTGGCTTCGCAATGTCGAAGATCTTCTGCACGAGCGCGGCATAGACGTGTGTCACGAGAGTGTCCGCTTGTGGGTCG
ATCGCTTCGGAACATACTTCGCAGATAAGATCCGTAAGCGGAGGTCAGAGGCAATGCGCCGGGTCAAGCAATGGCGCTGG
CACCTGGATGAGGTCTTCGTGAAGATCCGCGGAGAGACACACTATCTTTGGCGCGCGGTTGACCACGAAGGGGAGGTGTT
TGAAGCTTACGTCACCAAGAAGCGGGACAAGGCTGCAGCGCTGAAATTCCTCAGAAAAGCCATGAAACGCTATGGAAATC
CAGAAGTCGTGGTGACTGACAAGTGCCCATCCTACCGCGCAGCGATGAAGGTGATTGGAAACGAGGGACGCCAGGAAACA
GGCCGTCATTTAAACAATCGCGCCGAGAATTCGCACTTGCCTTTTCGAAGACGCGAGCGGGCGATGTCGCGCTTCAGGCG
AATGCGTAGTCTTCAAAAATTCGCTTCAATGCATTCGTCTGTACACAATCATTTCAATCATCAGAGAAACATCAAGAGGA
GGGCCGGCTTCAAATCGCTACGAGACGCCGCCTTTCGCGAATGGCGCGAACTTCTCGTTGTCTAG

Upstream 100 bases:

>100_bases
CTAGTCTCGGAAAATGACAAAATCGCCGTTCCGATATTTCAAGTGGATTGTCAGTGCAATCGGCCTTGAGGAGGTGATTT
CGGCCATGTAGCCTCAGGGA

Downstream 100 bases:

>100_bases
CACCTGCTGACCCGCGAATAGCGGAGACGGGTTCGCATTCGACTGACAGCACCGCCAGACTTTCTGCGTAGTCTCCAGGG
AATGCGGGCGTTCGAACGTT

Product: ISHne6, transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAISPFRYFKTSSEIIQLGVLMYVRFPLWLRNVEDLLHERGIDVCHESVRLWVDRFGTYFADKIRKRRSEAMRRVKQWRW
HLDEVFVKIRGETHYLWRAVDHEGEVFEAYVTKKRDKAAALKFLRKAMKRYGNPEVVVTDKCPSYRAAMKVIGNEGRQET
GRHLNNRAENSHLPFRRRERAMSRFRRMRSLQKFASMHSSVHNHFNHQRNIKRRAGFKSLRDAAFREWRELLVV

Sequences:

>Translated_234_residues
MAISPFRYFKTSSEIIQLGVLMYVRFPLWLRNVEDLLHERGIDVCHESVRLWVDRFGTYFADKIRKRRSEAMRRVKQWRW
HLDEVFVKIRGETHYLWRAVDHEGEVFEAYVTKKRDKAAALKFLRKAMKRYGNPEVVVTDKCPSYRAAMKVIGNEGRQET
GRHLNNRAENSHLPFRRRERAMSRFRRMRSLQKFASMHSSVHNHFNHQRNIKRRAGFKSLRDAAFREWRELLVV
>Mature_233_residues
AISPFRYFKTSSEIIQLGVLMYVRFPLWLRNVEDLLHERGIDVCHESVRLWVDRFGTYFADKIRKRRSEAMRRVKQWRWH
LDEVFVKIRGETHYLWRAVDHEGEVFEAYVTKKRDKAAALKFLRKAMKRYGNPEVVVTDKCPSYRAAMKVIGNEGRQETG
RHLNNRAENSHLPFRRRERAMSRFRRMRSLQKFASMHSSVHNHFNHQRNIKRRAGFKSLRDAAFREWRELLVV

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 28234; Mature: 28103

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISPFRYFKTSSEIIQLGVLMYVRFPLWLRNVEDLLHERGIDVCHESVRLWVDRFGTYF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ADKIRKRRSEAMRRVKQWRWHLDEVFVKIRGETHYLWRAVDHEGEVFEAYVTKKRDKAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LKFLRKAMKRYGNPEVVVTDKCPSYRAAMKVIGNEGRQETGRHLNNRAENSHLPFRRRER
HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHH
AMSRFRRMRSLQKFASMHSSVHNHFNHQRNIKRRAGFKSLRDAAFREWRELLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AISPFRYFKTSSEIIQLGVLMYVRFPLWLRNVEDLLHERGIDVCHESVRLWVDRFGTYF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ADKIRKRRSEAMRRVKQWRWHLDEVFVKIRGETHYLWRAVDHEGEVFEAYVTKKRDKAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LKFLRKAMKRYGNPEVVVTDKCPSYRAAMKVIGNEGRQETGRHLNNRAENSHLPFRRRER
HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHH
AMSRFRRMRSLQKFASMHSSVHNHFNHQRNIKRRAGFKSLRDAAFREWRELLVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]